Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 APJ1YNL077W 1587 nt8.13□□□□□ -1.11
RKR1Q04781 SAC6YDR129C 1929 nt8.11□□□□□ -1.11
RKR1Q04781 ASH1YKL185W 1767 nt8.11□□□□□ -1.11
RKR1Q04781 YDR133CYDR133C 336 nt8.11□□□□□ -1.11
RKR1Q04781 FAU1YER183C 636 nt8.11□□□□□ -1.11
RKR1Q04781 SSK1YLR006C 2139 nt8.11□□□□□ -1.11
RKR1Q04781 YIL067CYIL067C 2037 nt8.11□□□□□ -1.11
RKR1Q04781 ENT5YDR153C 1236 nt8.1□□□□□ -1.11
RKR1Q04781 YOL131WYOL131W 327 nt8.1□□□□□ -1.11
RKR1Q04781 STB5YHR178W 2232 nt8.09□□□□□ -1.11
RKR1Q04781 YIL108WYIL108W 2091 nt8.09□□□□□ -1.11
RKR1Q04781 AFG2YLR397C 2343 nt8.09□□□□□ -1.11
RKR1Q04781 YKE4YIL023C 1041 nt8.09□□□□□ -1.11
RKR1Q04781 MND2YIR025W 1107 nt8.09□□□□□ -1.11
RKR1Q04781 RPT4YOR259C 1314 nt8.09□□□□□ -1.12
RKR1Q04781 NTE1YML059C 5040 nt8.08□□□□□ -1.12
RKR1Q04781 QRI1YDL103C 1434 nt8.08□□□□□ -1.12
RKR1Q04781 GLN3YER040W 2193 nt8.07□□□□□ -1.12
RKR1Q04781 YDR514CYDR514C 1452 nt8.07□□□□□ -1.12
RKR1Q04781 AVT3YKL146W 2079 nt8.06□□□□□ -1.12
RKR1Q04781 KNS1YLL019C 2214 nt8.06□□□□□ -1.12
RKR1Q04781 KEL1YHR158C 3495 nt8.06□□□□□ -1.12
RKR1Q04781 IDP1YDL066W 1287 nt8.05□□□□□ -1.12
RKR1Q04781 YPT32YGL210W 669 nt8.05□□□□□ -1.12
RKR1Q04781 CCS1YMR038C 750 nt8.05□□□□□ -1.12
RKR1Q04781 CKB2YOR039W 777 nt8.05□□□□□ -1.12
RKR1Q04781 RPL21BYPL079W 483 nt8.05□□□□□ -1.12
RKR1Q04781 MRL1YPR079W 1146 nt8.05□□□□□ -1.12
RKR1Q04781 ATM1YMR301C 2073 nt8.04□□□□□ -1.12
RKR1Q04781 UTP18YJL069C 1785 nt8.04□□□□□ -1.12
RKR1Q04781 GAL10YBR019C 2100 nt8.04□□□□□ -1.12
RKR1Q04781 MCH4YOL119C 1506 nt8.03□□□□□ -1.12
RKR1Q04781 PIF1YML061C 2580 nt8.03□□□□□ -1.12
RKR1Q04781 VMA13YPR036W 1437 nt8.03□□□□□ -1.12
RKR1Q04781 NOT3YIL038C 2511 nt8.03□□□□□ -1.12
RKR1Q04781 YNG2YHR090C 849 nt8.03□□□□□ -1.12
RKR1Q04781 GPM3YOL056W 912 nt8.03□□□□□ -1.12
RKR1Q04781 ARG8YOL140W 1272 nt8.03□□□□□ -1.12
RKR1Q04781 LYS2YBR115C 4179 nt8.03□□□□□ -1.12
RKR1Q04781 HXT13YEL069C 1695 nt8.03□□□□□ -1.12
RKR1Q04781 UBA3YPR066W 900 nt8.02□□□□□ -1.13
RKR1Q04781 ADE4YMR300C 1533 nt8.02□□□□□ -1.13
RKR1Q04781 PPM1YDR435C 987 nt8.01□□□□□ -1.13
RKR1Q04781 SAF1YBR280C 1914 nt8.01□□□□□ -1.13
RKR1Q04781 SKY1YMR216C 2229 nt8.01□□□□□ -1.13
RKR1Q04781 EXO70YJL085W 1872 nt7.99□□□□□ -1.13
RKR1Q04781 QDR1YIL120W 1692 nt7.99□□□□□ -1.13
RKR1Q04781 VPS5YOR069W 2028 nt7.99□□□□□ -1.13
RKR1Q04781 RHO4YKR055W 876 nt7.99□□□□□ -1.13
RKR1Q04781 PSH1YOL054W 1221 nt7.99□□□□□ -1.13
RKR1Q04781 SRV2YNL138W 1581 nt7.99□□□□□ -1.13
RKR1Q04781 ILV2YMR108W 2064 nt7.98□□□□□ -1.13
RKR1Q04781 CUE5YOR042W 1236 nt7.98□□□□□ -1.13
RKR1Q04781 PDH1YPR002W 1551 nt7.98□□□□□ -1.13
RKR1Q04781 SER33YIL074C 1410 nt7.97□□□□□ -1.13
RKR1Q04781 YGR035W-AYGR035W-A 222 nt7.97□□□□□ -1.13
RKR1Q04781 TOM71YHR117W 1920 nt7.97□□□□□ -1.13
RKR1Q04781 YNL057WYNL057W 333 nt7.97□□□□□ -1.13
RKR1Q04781 PDB1YBR221C 1101 nt7.97□□□□□ -1.13
RKR1Q04781 RPT2YDL007W 1314 nt7.96□□□□□ -1.13
RKR1Q04781 SMF3YLR034C 1422 nt7.96□□□□□ -1.14
RKR1Q04781 SEC12YNR026C 1416 nt7.96□□□□□ -1.14
RKR1Q04781 RPS19BYNL302C 435 nt7.96□□□□□ -1.14
RKR1Q04781 RRT2YBR246W 1164 nt7.96□□□□□ -1.14
RKR1Q04781 GEX1YCL073C 1848 nt7.96□□□□□ -1.14
RKR1Q04781 GEX2YKR106W 1848 nt7.96□□□□□ -1.14
RKR1Q04781 HIR1YBL008W 2523 nt7.95□□□□□ -1.14
RKR1Q04781 CLB1YGR108W 1416 nt7.95□□□□□ -1.14
RKR1Q04781 APN1YKL114C 1104 nt7.95□□□□□ -1.14
RKR1Q04781 PEX22YAL055W 543 nt7.95□□□□□ -1.14
RKR1Q04781 DCI1YOR180C 816 nt7.95□□□□□ -1.14
RKR1Q04781 SCO1YBR037C 888 nt7.95□□□□□ -1.14
RKR1Q04781 PRR1YKL116C 1557 nt7.94□□□□□ -1.14
RKR1Q04781 SCS2YER120W 735 nt7.94□□□□□ -1.14
RKR1Q04781 DCS2YOR173W 1062 nt7.94□□□□□ -1.14
RKR1Q04781 YPR098CYPR098C 486 nt7.94□□□□□ -1.14
RKR1Q04781 CLN1YMR199W 1641 nt7.94□□□□□ -1.14
RKR1Q04781 ERG12YMR208W 1332 nt7.94□□□□□ -1.14
RKR1Q04781 ICL2YPR006C 1728 nt7.93□□□□□ -1.14
RKR1Q04781 YLF2YHL014C 1218 nt7.93□□□□□ -1.14
RKR1Q04781 PRS1YKL181W 1284 nt7.93□□□□□ -1.14
RKR1Q04781 POP3YNL282W 588 nt7.93□□□□□ -1.14
RKR1Q04781 YMR027WYMR027W 1413 nt7.93□□□□□ -1.14
RKR1Q04781 BNA6YFR047C 888 nt7.93□□□□□ -1.14
RKR1Q04781 MF(ALPHA)2YGL089C 363 nt7.93□□□□□ -1.14
RKR1Q04781 PGA2YNL149C 390 nt7.93□□□□□ -1.14
RKR1Q04781 ERG4YGL012W 1422 nt7.92□□□□□ -1.14
RKR1Q04781 KIP2YPL155C 2121 nt7.92□□□□□ -1.14
RKR1Q04781 YAL044W-AYAL044W-A 333 nt7.91□□□□□ -1.14
RKR1Q04781 YBL044WYBL044W 369 nt7.91□□□□□ -1.14
RKR1Q04781 PFA3YNL326C 1011 nt7.91□□□□□ -1.14
RKR1Q04781 ATG20YDL113C 1923 nt7.91□□□□□ -1.14
RKR1Q04781 KEX2YNL238W 2445 nt7.9□□□□□ -1.14
RKR1Q04781 HXT5YHR096C 1779 nt7.9□□□□□ -1.14
RKR1Q04781 YDL027CYDL027C 1263 nt7.9□□□□□ -1.14
RKR1Q04781 MRF1YGL143C 1242 nt7.9□□□□□ -1.14
RKR1Q04781 TYS1YGR185C 1185 nt7.9□□□□□ -1.14
RKR1Q04781 GEP5YLR091W 882 nt7.9□□□□□ -1.14
RKR1Q04781 SIP2YGL208W 1248 nt7.89□□□□□ -1.15
RKR1Q04781 HXT3YDR345C 1704 nt7.89□□□□□ -1.15
Retrieved 100 of 7,029 protein–RNA pairs in 18.3 ms