Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 JIP4YDR475C 2631 nt4.9□□□□□ -1.63
CUP9P41817 YHR045WYHR045W 1683 nt4.89□□□□□ -1.63
CUP9P41817 IRS4YKR019C 1848 nt4.89□□□□□ -1.63
CUP9P41817 tX(XXX)DtX(XXX)D 100 nt4.89□□□□□ -1.63
CUP9P41817 GEP5YLR091W 882 nt4.89□□□□□ -1.63
CUP9P41817 ALD6YPL061W 1503 nt4.88□□□□□ -1.63
CUP9P41817 IPI1YHR085W 1005 nt4.88□□□□□ -1.63
CUP9P41817 RHO4YKR055W 876 nt4.88□□□□□ -1.63
CUP9P41817 ATP14YLR295C 375 nt4.88□□□□□ -1.63
CUP9P41817 RBD2YPL246C 789 nt4.88□□□□□ -1.63
CUP9P41817 BBP1YPL255W 1158 nt4.88□□□□□ -1.63
CUP9P41817 IMA2YOL157C 1770 nt4.88□□□□□ -1.63
CUP9P41817 TAX4YJL083W 1815 nt4.88□□□□□ -1.63
CUP9P41817 CRZ1YNL027W 2037 nt4.87□□□□□ -1.63
CUP9P41817 TKL1YPR074C 2043 nt4.87□□□□□ -1.63
CUP9P41817 RRP45YDR280W 918 nt4.87□□□□□ -1.63
CUP9P41817 CBF1YJR060W 1056 nt4.87□□□□□ -1.63
CUP9P41817 ETR1YBR026C 1143 nt4.87□□□□□ -1.63
CUP9P41817 ICE2YIL090W 1476 nt4.87□□□□□ -1.63
CUP9P41817 FAT3YKL187C 2253 nt4.86□□□□□ -1.63
CUP9P41817 SSK22YCR073C 3996 nt4.86□□□□□ -1.63
CUP9P41817 YDR541CYDR541C 1035 nt4.86□□□□□ -1.63
CUP9P41817 TDH3YGR192C 999 nt4.86□□□□□ -1.63
CUP9P41817 YLR317WYLR317W 435 nt4.86□□□□□ -1.63
CUP9P41817 CIT3YPR001W 1461 nt4.86□□□□□ -1.63
CUP9P41817 BAP2YBR068C 1830 nt4.86□□□□□ -1.63
CUP9P41817 GYP1YOR070C 1914 nt4.85□□□□□ -1.63
CUP9P41817 SSK1YLR006C 2139 nt4.85□□□□□ -1.63
CUP9P41817 DUR1,2YBR208C 5508 nt4.85□□□□□ -1.63
CUP9P41817 SHO1YER118C 1104 nt4.85□□□□□ -1.63
CUP9P41817 tR(ACG)JtR(ACG)J 73 nt4.85□□□□□ -1.63
CUP9P41817 YJL068CYJL068C 900 nt4.85□□□□□ -1.63
CUP9P41817 YAL056C-AYAL056C-A 351 nt4.85□□□□□ -1.63
CUP9P41817 RER2YBR002C 861 nt4.85□□□□□ -1.63
CUP9P41817 DED81YHR019C 1665 nt4.85□□□□□ -1.63
CUP9P41817 ENT2YLR206W 1842 nt4.85□□□□□ -1.63
CUP9P41817 ACF2YLR144C 2340 nt4.84□□□□□ -1.63
CUP9P41817 GPT2YKR067W 2232 nt4.84□□□□□ -1.63
CUP9P41817 GEX1YCL073C 1848 nt4.84□□□□□ -1.63
CUP9P41817 GEX2YKR106W 1848 nt4.84□□□□□ -1.63
CUP9P41817 MTC1YJL123C 1437 nt4.84□□□□□ -1.63
CUP9P41817 PFA3YNL326C 1011 nt4.84□□□□□ -1.63
CUP9P41817 RET1YOR207C 3450 nt4.84□□□□□ -1.64
CUP9P41817 YAP1YML007W 1953 nt4.84□□□□□ -1.64
CUP9P41817 ASN1YPR145W 1719 nt4.83□□□□□ -1.64
CUP9P41817 THI21YPL258C 1656 nt4.83□□□□□ -1.64
CUP9P41817 MCM6YGL201C 3054 nt4.83□□□□□ -1.64
CUP9P41817 YNR042WYNR042W 429 nt4.83□□□□□ -1.64
CUP9P41817 GDB1YPR184W 4611 nt4.83□□□□□ -1.64
CUP9P41817 HSF1YGL073W 2502 nt4.83□□□□□ -1.64
CUP9P41817 VID30YGL227W 2877 nt4.83□□□□□ -1.64
CUP9P41817 MTQ2YDR140W 666 nt4.82□□□□□ -1.64
CUP9P41817 FHN1YGR131W 525 nt4.82□□□□□ -1.64
CUP9P41817 PRP45YAL032C 1140 nt4.82□□□□□ -1.64
CUP9P41817 YMR010WYMR010W 1218 nt4.82□□□□□ -1.64
CUP9P41817 YBR226CYBR226C 411 nt4.82□□□□□ -1.64
CUP9P41817 EPS1YIL005W 2106 nt4.82□□□□□ -1.64
CUP9P41817 SFB3YHR098C 2790 nt4.82□□□□□ -1.64
CUP9P41817 UTP18YJL069C 1785 nt4.81□□□□□ -1.64
CUP9P41817 YIL060WYIL060W 435 nt4.81□□□□□ -1.64
CUP9P41817 CPA1YOR303W 1236 nt4.81□□□□□ -1.64
CUP9P41817 TBF1YPL128C 1689 nt4.8□□□□□ -1.64
CUP9P41817 SCT1YBL011W 2280 nt4.8□□□□□ -1.64
CUP9P41817 TNA1YGR260W 1605 nt4.8□□□□□ -1.64
CUP9P41817 PPR1YLR014C 2715 nt4.8□□□□□ -1.64
CUP9P41817 SIP2YGL208W 1248 nt4.8□□□□□ -1.64
CUP9P41817 YNL019CYNL019C 855 nt4.8□□□□□ -1.64
CUP9P41817 YNL033WYNL033W 855 nt4.8□□□□□ -1.64
CUP9P41817 MET8YBR213W 825 nt4.8□□□□□ -1.64
CUP9P41817 IES1YFL013C 2079 nt4.8□□□□□ -1.64
CUP9P41817 RNR3YIL066C 2610 nt4.8□□□□□ -1.64
CUP9P41817 ULA1YPL003W 1389 nt4.79□□□□□ -1.64
CUP9P41817 PAP2YOL115W 1755 nt4.79□□□□□ -1.64
CUP9P41817 RRP46YGR095C 672 nt4.79□□□□□ -1.64
CUP9P41817 ASH1YKL185W 1767 nt4.78□□□□□ -1.64
CUP9P41817 YFL034WYFL034W 3222 nt4.78□□□□□ -1.64
CUP9P41817 YNL296WYNL296W 315 nt4.78□□□□□ -1.64
CUP9P41817 GPM3YOL056W 912 nt4.78□□□□□ -1.64
CUP9P41817 RRT2YBR246W 1164 nt4.78□□□□□ -1.64
CUP9P41817 PIF1YML061C 2580 nt4.78□□□□□ -1.64
CUP9P41817 YDR134CYDR134C 411 nt4.77□□□□□ -1.65
CUP9P41817 ROX3YBL093C 663 nt4.77□□□□□ -1.65
CUP9P41817 FLC3YGL139W 2409 nt4.77□□□□□ -1.65
CUP9P41817 HSP104YLL026W 2727 nt4.77□□□□□ -1.65
CUP9P41817 MKK2YPL140C 1521 nt4.77□□□□□ -1.65
CUP9P41817 GUP2YPL189W 1830 nt4.76□□□□□ -1.65
CUP9P41817 VPS70YJR126C 2436 nt4.76□□□□□ -1.65
CUP9P41817 SUA5YGL169W 1281 nt4.76□□□□□ -1.65
CUP9P41817 POR1YNL055C 852 nt4.76□□□□□ -1.65
CUP9P41817 RHO2YNL090W 579 nt4.76□□□□□ -1.65
CUP9P41817 RPS19BYNL302C 435 nt4.76□□□□□ -1.65
CUP9P41817 SER1YOR184W 1188 nt4.76□□□□□ -1.65
CUP9P41817 YIR007WYIR007W 2295 nt4.76□□□□□ -1.65
CUP9P41817 GSY2YLR258W 2118 nt4.76□□□□□ -1.65
CUP9P41817 HRP1YOL123W 1605 nt4.75□□□□□ -1.65
CUP9P41817 TRP3YKL211C 1455 nt4.75□□□□□ -1.65
CUP9P41817 SEC12YNR026C 1416 nt4.75□□□□□ -1.65
CUP9P41817 YPT32YGL210W 669 nt4.75□□□□□ -1.65
CUP9P41817 MTQ1YNL063W 945 nt4.75□□□□□ -1.65
CUP9P41817 PSH1YOL054W 1221 nt4.75□□□□□ -1.65
Retrieved 100 of 7,029 protein–RNA pairs in 78.1 ms