Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP6V0CP27449 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.73■□□□□ 0.59
ATP6V0CP27449 LINC00565-201ENST00000562710 2331 ntBASIC18.73■□□□□ 0.59
ATP6V0CP27449 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP6V0CP27449 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATP6V0CP27449 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.72■□□□□ 0.59
ATP6V0CP27449 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATP6V0CP27449 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATP6V0CP27449 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.72■□□□□ 0.59
ATP6V0CP27449 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATP6V0CP27449 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ATP6V0CP27449 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATP6V0CP27449 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.72■□□□□ 0.59
ATP6V0CP27449 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATP6V0CP27449 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATP6V0CP27449 EP400NL-214ENST00000641289 2402 ntBASIC18.72■□□□□ 0.59
ATP6V0CP27449 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ATP6V0CP27449 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ATP6V0CP27449 AC233723.2-201ENST00000623798 2106 ntBASIC18.71■□□□□ 0.59
ATP6V0CP27449 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.71■□□□□ 0.59
ATP6V0CP27449 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.71■□□□□ 0.59
ATP6V0CP27449 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP6V0CP27449 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP6V0CP27449 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP6V0CP27449 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATP6V0CP27449 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
ATP6V0CP27449 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.7■□□□□ 0.58
ATP6V0CP27449 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ATP6V0CP27449 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP6V0CP27449 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP6V0CP27449 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP6V0CP27449 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ATP6V0CP27449 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.7■□□□□ 0.58
ATP6V0CP27449 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.7■□□□□ 0.58
ATP6V0CP27449 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.7■□□□□ 0.58
ATP6V0CP27449 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP6V0CP27449 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ATP6V0CP27449 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP6V0CP27449 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP6V0CP27449 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATP6V0CP27449 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP6V0CP27449 SUZ12P1-203ENST00000578195 985 ntBASIC18.69■□□□□ 0.58
ATP6V0CP27449 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ATP6V0CP27449 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATP6V0CP27449 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP6V0CP27449 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
ATP6V0CP27449 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6V0CP27449 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.68■□□□□ 0.58
ATP6V0CP27449 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6V0CP27449 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6V0CP27449 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ATP6V0CP27449 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6V0CP27449 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
ATP6V0CP27449 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP6V0CP27449 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.68■□□□□ 0.58
ATP6V0CP27449 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP6V0CP27449 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATP6V0CP27449 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ATP6V0CP27449 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ATP6V0CP27449 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATP6V0CP27449 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP6V0CP27449 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP6V0CP27449 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP6V0CP27449 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP6V0CP27449 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.67■□□□□ 0.58
ATP6V0CP27449 AL359504.2-201ENST00000605506 1601 ntBASIC18.67■□□□□ 0.58
ATP6V0CP27449 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP6V0CP27449 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ATP6V0CP27449 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.66■□□□□ 0.58
ATP6V0CP27449 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP6V0CP27449 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP6V0CP27449 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP6V0CP27449 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP6V0CP27449 DUX4L28-201ENST00000623687 678 ntBASIC18.66■□□□□ 0.58
ATP6V0CP27449 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ATP6V0CP27449 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
ATP6V0CP27449 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
ATP6V0CP27449 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP6V0CP27449 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP6V0CP27449 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP6V0CP27449 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP6V0CP27449 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP6V0CP27449 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP6V0CP27449 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP6V0CP27449 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP6V0CP27449 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP6V0CP27449 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP6V0CP27449 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP6V0CP27449 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
ATP6V0CP27449 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATP6V0CP27449 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP6V0CP27449 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP6V0CP27449 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP6V0CP27449 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP6V0CP27449 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP6V0CP27449 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP6V0CP27449 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP6V0CP27449 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP6V0CP27449 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP6V0CP27449 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms