Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 PDB1YBR221C 1101 nt5.2□□□□□ -1.58
RPL40BP0CH09 GPT2YKR067W 2232 nt5.19□□□□□ -1.58
RPL40BP0CH09 LYS5YGL154C 819 nt5.19□□□□□ -1.58
RPL40BP0CH09 VPS29YHR012W 849 nt5.19□□□□□ -1.58
RPL40BP0CH09 YHR127WYHR127W 732 nt5.19□□□□□ -1.58
RPL40BP0CH09 SCO2YBR024W 906 nt5.19□□□□□ -1.58
RPL40BP0CH09 PEP4YPL154C 1218 nt5.19□□□□□ -1.58
RPL40BP0CH09 SCT1YBL011W 2280 nt5.19□□□□□ -1.58
RPL40BP0CH09 GUA1YMR217W 1578 nt5.19□□□□□ -1.58
RPL40BP0CH09 EPS1YIL005W 2106 nt5.18□□□□□ -1.58
RPL40BP0CH09 THI21YPL258C 1656 nt5.18□□□□□ -1.58
RPL40BP0CH09 IPI1YHR085W 1005 nt5.18□□□□□ -1.58
RPL40BP0CH09 TAL1YLR354C 1008 nt5.18□□□□□ -1.58
RPL40BP0CH09 FEX1YOR390W 1128 nt5.18□□□□□ -1.58
RPL40BP0CH09 FEX2YPL279C 1128 nt5.18□□□□□ -1.58
RPL40BP0CH09 HSP104YLL026W 2727 nt5.18□□□□□ -1.58
RPL40BP0CH09 NOP8YOL144W 1455 nt5.18□□□□□ -1.58
RPL40BP0CH09 SKN1YGR143W 2316 nt5.17□□□□□ -1.58
RPL40BP0CH09 SLC1YDL052C 912 nt5.17□□□□□ -1.58
RPL40BP0CH09 TRP3YKL211C 1455 nt5.17□□□□□ -1.58
RPL40BP0CH09 YDR109CYDR109C 2148 nt5.17□□□□□ -1.58
RPL40BP0CH09 TBF1YPL128C 1689 nt5.16□□□□□ -1.58
RPL40BP0CH09 HIS7YBR248C 1659 nt5.16□□□□□ -1.58
RPL40BP0CH09 DJP1YIR004W 1299 nt5.16□□□□□ -1.58
RPL40BP0CH09 YKL223WYKL223W 333 nt5.16□□□□□ -1.58
RPL40BP0CH09 GSY2YLR258W 2118 nt5.16□□□□□ -1.58
RPL40BP0CH09 YNR040WYNR040W 771 nt5.16□□□□□ -1.58
RPL40BP0CH09 KKQ8YKL168C 2175 nt5.16□□□□□ -1.58
RPL40BP0CH09 GYP8YFL027C 1494 nt5.15□□□□□ -1.58
RPL40BP0CH09 YDR134CYDR134C 411 nt5.15□□□□□ -1.59
RPL40BP0CH09 BNA6YFR047C 888 nt5.15□□□□□ -1.59
RPL40BP0CH09 RPN7YPR108W 1290 nt5.15□□□□□ -1.59
RPL40BP0CH09 RIM101YHL027W 1878 nt5.14□□□□□ -1.59
RPL40BP0CH09 FHN1YGR131W 525 nt5.14□□□□□ -1.59
RPL40BP0CH09 ATP1YBL099W 1638 nt5.14□□□□□ -1.59
RPL40BP0CH09 SSK22YCR073C 3996 nt5.14□□□□□ -1.59
RPL40BP0CH09 UBP13YBL067C 2244 nt5.13□□□□□ -1.59
RPL40BP0CH09 HSP78YDR258C 2436 nt5.13□□□□□ -1.59
RPL40BP0CH09 YIL077CYIL077C 963 nt5.13□□□□□ -1.59
RPL40BP0CH09 CBF1YJR060W 1056 nt5.13□□□□□ -1.59
RPL40BP0CH09 POR1YNL055C 852 nt5.13□□□□□ -1.59
RPL40BP0CH09 NMT1YLR195C 1368 nt5.13□□□□□ -1.59
RPL40BP0CH09 RAD3YER171W 2337 nt5.13□□□□□ -1.59
RPL40BP0CH09 PYC1YGL062W 3537 nt5.13□□□□□ -1.59
RPL40BP0CH09 YEL020CYEL020C 1683 nt5.12□□□□□ -1.59
RPL40BP0CH09 PFA3YNL326C 1011 nt5.12□□□□□ -1.59
RPL40BP0CH09 CAM1YPL048W 1248 nt5.12□□□□□ -1.59
RPL40BP0CH09 YNL057WYNL057W 333 nt5.11□□□□□ -1.59
RPL40BP0CH09 YRF1-4YLR466W 4149 nt5.11□□□□□ -1.59
RPL40BP0CH09 YEH1YLL012W 1722 nt5.11□□□□□ -1.59
RPL40BP0CH09 VTH1YIL173W 4650 nt5.1□□□□□ -1.59
RPL40BP0CH09 VTH2YJL222W 4650 nt5.1□□□□□ -1.59
RPL40BP0CH09 YER148W-AYER148W-A 579 nt5.1□□□□□ -1.59
RPL40BP0CH09 TDH3YGR192C 999 nt5.1□□□□□ -1.59
RPL40BP0CH09 PRP45YAL032C 1140 nt5.1□□□□□ -1.59
RPL40BP0CH09 YAP1YML007W 1953 nt5.1□□□□□ -1.59
RPL40BP0CH09 MAP2YBL091C 1266 nt5.1□□□□□ -1.59
RPL40BP0CH09 RER2YBR002C 861 nt5.1□□□□□ -1.59
RPL40BP0CH09 CKB2YOR039W 777 nt5.1□□□□□ -1.59
RPL40BP0CH09 YIR007WYIR007W 2295 nt5.09□□□□□ -1.59
RPL40BP0CH09 GIT1YCR098C 1557 nt5.09□□□□□ -1.59
RPL40BP0CH09 IDP1YDL066W 1287 nt5.09□□□□□ -1.59
RPL40BP0CH09 SAF1YBR280C 1914 nt5.09□□□□□ -1.6
RPL40BP0CH09 AIM3YBR108W 2844 nt5.09□□□□□ -1.6
RPL40BP0CH09 ALT1YLR089C 1779 nt5.09□□□□□ -1.6
RPL40BP0CH09 HAP2YGL237C 798 nt5.08□□□□□ -1.6
RPL40BP0CH09 YIL060WYIL060W 435 nt5.08□□□□□ -1.6
RPL40BP0CH09 ENT2YLR206W 1842 nt5.07□□□□□ -1.6
RPL40BP0CH09 VCX1YDL128W 1236 nt5.07□□□□□ -1.6
RPL40BP0CH09 SIP2YGL208W 1248 nt5.07□□□□□ -1.6
RPL40BP0CH09 YJL068CYJL068C 900 nt5.07□□□□□ -1.6
RPL40BP0CH09 PEX22YAL055W 543 nt5.07□□□□□ -1.6
RPL40BP0CH09 YLR296WYLR296W 327 nt5.07□□□□□ -1.6
RPL40BP0CH09 YPK2YMR104C 2034 nt5.07□□□□□ -1.6
RPL40BP0CH09 TOS4YLR183C 1470 nt5.07□□□□□ -1.6
RPL40BP0CH09 ASH1YKL185W 1767 nt5.06□□□□□ -1.6
RPL40BP0CH09 DBP9YLR276C 1785 nt5.06□□□□□ -1.6
RPL40BP0CH09 ERC1YHR032W 1746 nt5.06□□□□□ -1.6
RPL40BP0CH09 MCM3YEL032W 2916 nt5.06□□□□□ -1.6
RPL40BP0CH09 FET3YMR058W 1911 nt5.06□□□□□ -1.6
RPL40BP0CH09 YER186CYER186C 921 nt5.06□□□□□ -1.6
RPL40BP0CH09 LYS12YIL094C 1116 nt5.06□□□□□ -1.6
RPL40BP0CH09 PGA3YML125C 939 nt5.06□□□□□ -1.6
RPL40BP0CH09 YME1YPR024W 2244 nt5.06□□□□□ -1.6
RPL40BP0CH09 ICE2YIL090W 1476 nt5.06□□□□□ -1.6
RPL40BP0CH09 GPA1YHR005C 1419 nt5.06□□□□□ -1.6
RPL40BP0CH09 MSH1YHR120W 2880 nt5.05□□□□□ -1.6
RPL40BP0CH09 SCS2YER120W 735 nt5.05□□□□□ -1.6
RPL40BP0CH09 RPS2YGL123W 765 nt5.05□□□□□ -1.6
RPL40BP0CH09 RME1YGR044C 903 nt5.05□□□□□ -1.6
RPL40BP0CH09 YLR317WYLR317W 435 nt5.05□□□□□ -1.6
RPL40BP0CH09 YBL010CYBL010C 843 nt5.05□□□□□ -1.6
RPL40BP0CH09 CPA1YOR303W 1236 nt5.05□□□□□ -1.6
RPL40BP0CH09 DRN1YGR093W 1524 nt5.05□□□□□ -1.6
RPL40BP0CH09 GDA1YEL042W 1557 nt5.04□□□□□ -1.6
RPL40BP0CH09 RET1YOR207C 3450 nt5.04□□□□□ -1.6
RPL40BP0CH09 SHE10YGL228W 1734 nt5.04□□□□□ -1.6
RPL40BP0CH09 YER010CYER010C 705 nt5.04□□□□□ -1.6
RPL40BP0CH09 RPN12YFR052W 825 nt5.04□□□□□ -1.6
RPL40BP0CH09 MTM1YGR257C 1101 nt5.04□□□□□ -1.6
Retrieved 100 of 7,029 protein–RNA pairs in 172.6 ms