Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
P04436 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.5■■□□□ 1.03
P04436 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
P04436 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.5■■□□□ 1.03
P04436 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
P04436 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
P04436 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
P04436 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
P04436 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.49■■□□□ 1.03
P04436 MIR4787-201ENST00000607364 84 ntBASIC21.49■■□□□ 1.03
P04436 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.49■■□□□ 1.03
P04436 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
P04436 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.48■■□□□ 1.03
P04436 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.48■■□□□ 1.03
P04436 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.48■■□□□ 1.03
P04436 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.48■■□□□ 1.03
P04436 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
P04436 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
P04436 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
P04436 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
P04436 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.47■■□□□ 1.03
P04436 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.47■■□□□ 1.03
P04436 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.46■■□□□ 1.03
P04436 AC090877.2-201ENST00000558441 1738 ntBASIC21.46■■□□□ 1.03
P04436 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
P04436 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
P04436 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
P04436 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
P04436 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.46■■□□□ 1.03
P04436 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.46■■□□□ 1.03
P04436 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
P04436 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.46■■□□□ 1.03
P04436 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
P04436 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
P04436 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
P04436 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
P04436 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
P04436 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
P04436 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
P04436 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.45■■□□□ 1.02
P04436 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
P04436 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
P04436 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
P04436 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
P04436 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
P04436 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.44■■□□□ 1.02
P04436 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
P04436 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
P04436 AC021242.3-201ENST00000607598 1377 ntBASIC21.44■■□□□ 1.02
P04436 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
P04436 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.44■■□□□ 1.02
P04436 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
P04436 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
P04436 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
P04436 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.43■■□□□ 1.02
P04436 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
P04436 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
P04436 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.43■■□□□ 1.02
P04436 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
P04436 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
P04436 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.42■■□□□ 1.02
P04436 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.42■■□□□ 1.02
P04436 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
P04436 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.41■■□□□ 1.02
P04436 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
P04436 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
P04436 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
P04436 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.41■■□□□ 1.02
P04436 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
P04436 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.41■■□□□ 1.02
P04436 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.41■■□□□ 1.02
P04436 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.41■■□□□ 1.02
P04436 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
P04436 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
P04436 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
P04436 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
P04436 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
P04436 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.4■■□□□ 1.02
P04436 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.4■■□□□ 1.02
P04436 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
P04436 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
P04436 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
P04436 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
P04436 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.39■■□□□ 1.01
P04436 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
P04436 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
P04436 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.39■■□□□ 1.01
P04436 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
P04436 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
P04436 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
P04436 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
P04436 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.38■■□□□ 1.01
P04436 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.37■■□□□ 1.01
P04436 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.37■■□□□ 1.01
P04436 TSPY9P-201ENST00000440215 945 ntBASIC21.37■■□□□ 1.01
P04436 TSPY11P-201ENST00000442607 1045 ntBASIC21.37■■□□□ 1.01
P04436 AL356441.2-201ENST00000443009 864 ntBASIC21.37■■□□□ 1.01
P04436 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
P04436 AC092028.1-203ENST00000608262 953 ntBASIC21.37■■□□□ 1.01
P04436 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 296.5 ms