Protein–RNA interactions for Protein: P33400

RIM101, pH-response transcription factor pacC/RIM101, yeastyeast

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM101P33400 MOD5YOR274W 1287 nt14.25□□□□□ -0.13
RIM101P33400 POA1YBR022W 534 nt14.22□□□□□ -0.13
RIM101P33400 YGL118CYGL118C 438 nt14.21□□□□□ -0.13
RIM101P33400 MPS2YGL075C 1164 nt14.2□□□□□ -0.14
RIM101P33400 YHP1YDR451C 1062 nt14.18□□□□□ -0.14
RIM101P33400 MPC1YGL080W 393 nt14.18□□□□□ -0.14
RIM101P33400 STB1YNL309W 1263 nt14.18□□□□□ -0.14
RIM101P33400 YPL041CYPL041C 624 nt14.18□□□□□ -0.14
RIM101P33400 YML079WYML079W 606 nt14.16□□□□□ -0.14
RIM101P33400 YJR154WYJR154W 1041 nt14.15□□□□□ -0.14
RIM101P33400 YMR306C-AYMR306C-A 390 nt14.15□□□□□ -0.14
RIM101P33400 BSC6YOL137W 1494 nt14.14□□□□□ -0.15
RIM101P33400 FTH1YBR207W 1398 nt14.14□□□□□ -0.15
RIM101P33400 UBC12YLR306W 567 nt14.14□□□□□ -0.15
RIM101P33400 COG1YGL223C 1254 nt14.13□□□□□ -0.15
RIM101P33400 PIC2YER053C 903 nt14.12□□□□□ -0.15
RIM101P33400 PET122YER153C 765 nt14.12□□□□□ -0.15
RIM101P33400 SCR1SCR1 522 nt14.11□□□□□ -0.15
RIM101P33400 GTT3YEL017W 1014 nt14.09□□□□□ -0.15
RIM101P33400 ARC19YKL013C 516 nt14.09□□□□□ -0.15
RIM101P33400 FAR3YMR052W 615 nt14.08□□□□□ -0.16
RIM101P33400 YBL081WYBL081W 1107 nt14.07□□□□□ -0.16
RIM101P33400 tR(UCU)Q1tR(UCU)Q1 73 nt14.06□□□□□ -0.16
RIM101P33400 COX3Q0275 810 nt14.05□□□□□ -0.16
RIM101P33400 BDF1YLR399C 2061 nt14.05□□□□□ -0.16
RIM101P33400 PAB1YER165W 1734 nt14.04□□□□□ -0.16
RIM101P33400 YHR049C-AYHR049C-A 297 nt14□□□□□ -0.17
RIM101P33400 BNS1YGR230W 414 nt13.97□□□□□ -0.17
RIM101P33400 YNL234WYNL234W 1281 nt13.97□□□□□ -0.17
RIM101P33400 BNA3YJL060W 1335 nt13.96□□□□□ -0.17
RIM101P33400 NAT5YOR253W 531 nt13.95□□□□□ -0.18
RIM101P33400 RVS167YDR388W 1449 nt13.94□□□□□ -0.18
RIM101P33400 SED5YLR026C 1023 nt13.94□□□□□ -0.18
RIM101P33400 MRPL36YBR122C 534 nt13.94□□□□□ -0.18
RIM101P33400 ARP6YLR085C 1317 nt13.93□□□□□ -0.18
RIM101P33400 tP(UGG)O3tP(UGG)O3 72 nt13.93□□□□□ -0.18
RIM101P33400 HOS2YGL194C 1359 nt13.92□□□□□ -0.18
RIM101P33400 AIM41YOR215C 558 nt13.9□□□□□ -0.18
RIM101P33400 ICE2YIL090W 1476 nt13.88□□□□□ -0.19
RIM101P33400 RUF21RUF21 707 nt13.88□□□□□ -0.19
RIM101P33400 VPS28YPL065W 729 nt13.88□□□□□ -0.19
RIM101P33400 YPR1YDR368W 939 nt13.86□□□□□ -0.19
RIM101P33400 YMR119W-AYMR119W-A 375 nt13.86□□□□□ -0.19
RIM101P33400 NEJ1YLR265C 1029 nt13.85□□□□□ -0.19
RIM101P33400 SAH1YER043C 1350 nt13.84□□□□□ -0.19
RIM101P33400 YLR311CYLR311C 348 nt13.84□□□□□ -0.19
RIM101P33400 YNL040WYNL040W 1371 nt13.83□□□□□ -0.19
RIM101P33400 YDL157CYDL157C 357 nt13.83□□□□□ -0.2
RIM101P33400 DIA1YMR316W 1011 nt13.83□□□□□ -0.2
RIM101P33400 YTH1YPR107C 627 nt13.83□□□□□ -0.2
RIM101P33400 APM1YPL259C 1428 nt13.82□□□□□ -0.2
RIM101P33400 TSR2YLR435W 618 nt13.82□□□□□ -0.2
RIM101P33400 REC114YMR133W 1287 nt13.81□□□□□ -0.2
RIM101P33400 TAT1YBR069C 1860 nt13.8□□□□□ -0.2
RIM101P33400 YHR054CYHR054C 1065 nt13.79□□□□□ -0.2
RIM101P33400 PAC11YDR488C 1602 nt13.78□□□□□ -0.2
RIM101P33400 RRN5YLR141W 1092 nt13.77□□□□□ -0.21
RIM101P33400 URN1YPR152C 1398 nt13.73□□□□□ -0.21
RIM101P33400 PEX34YCL056C 435 nt13.73□□□□□ -0.21
RIM101P33400 YMR147WYMR147W 672 nt13.71□□□□□ -0.21
RIM101P33400 SUA5YGL169W 1281 nt13.7□□□□□ -0.22
RIM101P33400 YGR011WYGR011W 327 nt13.7□□□□□ -0.22
RIM101P33400 RSA3YLR221C 663 nt13.7□□□□□ -0.22
RIM101P33400 AME1YBR211C 975 nt13.7□□□□□ -0.22
RIM101P33400 TAZ1YPR140W 1146 nt13.65□□□□□ -0.22
RIM101P33400 YDL158CYDL158C 309 nt13.64□□□□□ -0.23
RIM101P33400 OPI9YLR338W 858 nt13.64□□□□□ -0.23
RIM101P33400 NDJ1YOL104C 1059 nt13.64□□□□□ -0.23
RIM101P33400 GET2YER083C 858 nt13.62□□□□□ -0.23
RIM101P33400 PUS5YLR165C 765 nt13.62□□□□□ -0.23
RIM101P33400 ATG17YLR423C 1254 nt13.62□□□□□ -0.23
RIM101P33400 YMR074CYMR074C 438 nt13.61□□□□□ -0.23
RIM101P33400 RSB1YOR049C 1065 nt13.61□□□□□ -0.23
RIM101P33400 SCO2YBR024W 906 nt13.61□□□□□ -0.23
RIM101P33400 NVJ2YPR091C 2313 nt13.6□□□□□ -0.23
RIM101P33400 COX16YJL003W 357 nt13.58□□□□□ -0.24
RIM101P33400 PCL10YGL134W 1302 nt13.58□□□□□ -0.24
RIM101P33400 PUS9YDL036C 1389 nt13.57□□□□□ -0.24
RIM101P33400 FHN1YGR131W 525 nt13.55□□□□□ -0.24
RIM101P33400 RPM1RPM1 483 nt13.55□□□□□ -0.24
RIM101P33400 YJR056CYJR056C 711 nt13.54□□□□□ -0.24
RIM101P33400 LIP2YLR239C 987 nt13.54□□□□□ -0.24
RIM101P33400 AQY1YPR192W 918 nt13.54□□□□□ -0.24
RIM101P33400 ECM9YKR004C 1134 nt13.53□□□□□ -0.24
RIM101P33400 TAF4YMR005W 1167 nt13.53□□□□□ -0.24
RIM101P33400 SUT2YPR009W 807 nt13.53□□□□□ -0.24
RIM101P33400 TIF34YMR146C 1044 nt13.52□□□□□ -0.25
RIM101P33400 PRM4YPL156C 855 nt13.52□□□□□ -0.25
RIM101P33400 MRI1YPR118W 1236 nt13.52□□□□□ -0.25
RIM101P33400 BUD23YCR047C 828 nt13.51□□□□□ -0.25
RIM101P33400 SLX1YBR228W 915 nt13.51□□□□□ -0.25
RIM101P33400 HAS1YMR290C 1518 nt13.5□□□□□ -0.25
RIM101P33400 CSI1YMR025W 888 nt13.5□□□□□ -0.25
RIM101P33400 ZTA1YBR046C 1005 nt13.5□□□□□ -0.25
RIM101P33400 IDI1YPL117C 867 nt13.5□□□□□ -0.25
RIM101P33400 YER088W-BYER088W-B 147 nt13.48□□□□□ -0.25
RIM101P33400 MSA2YKR077W 1092 nt13.48□□□□□ -0.25
RIM101P33400 FAF1YIL019W 1041 nt13.47□□□□□ -0.25
RIM101P33400 YDJ1YNL064C 1230 nt13.46□□□□□ -0.25
RIM101P33400 YOL107WYOL107W 1029 nt13.46□□□□□ -0.25
Retrieved 100 of 7,029 protein–RNA pairs in 15.9 ms