Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.61■□□□□ 0.57
TTC9CQ8N5M4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.61■□□□□ 0.57
TTC9CQ8N5M4 MIR6765-201ENST00000614092 87 ntBASIC18.61■□□□□ 0.57
TTC9CQ8N5M4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TTC9CQ8N5M4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.61■□□□□ 0.57
TTC9CQ8N5M4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TTC9CQ8N5M4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TTC9CQ8N5M4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TTC9CQ8N5M4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TTC9CQ8N5M4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.6■□□□□ 0.57
TTC9CQ8N5M4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.6■□□□□ 0.57
TTC9CQ8N5M4 RPS2P7-201ENST00000447334 885 ntBASIC18.6■□□□□ 0.57
TTC9CQ8N5M4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TTC9CQ8N5M4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TTC9CQ8N5M4 AP003733.4-201ENST00000623785 1697 ntBASIC18.6■□□□□ 0.57
TTC9CQ8N5M4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.59■□□□□ 0.57
TTC9CQ8N5M4 DUX4L9-201ENST00000449051 1259 ntBASIC18.59■□□□□ 0.57
TTC9CQ8N5M4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TTC9CQ8N5M4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TTC9CQ8N5M4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TTC9CQ8N5M4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TTC9CQ8N5M4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TTC9CQ8N5M4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.58■□□□□ 0.57
TTC9CQ8N5M4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TTC9CQ8N5M4 KRT18P60-201ENST00000312876 1297 ntBASIC18.58■□□□□ 0.56
TTC9CQ8N5M4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TTC9CQ8N5M4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.58■□□□□ 0.56
TTC9CQ8N5M4 NTF6A-201ENST00000591175 560 ntBASIC18.58■□□□□ 0.56
TTC9CQ8N5M4 AC129492.7-201ENST00000622992 756 ntBASIC18.58■□□□□ 0.56
TTC9CQ8N5M4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.57■□□□□ 0.56
TTC9CQ8N5M4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.57■□□□□ 0.56
TTC9CQ8N5M4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TTC9CQ8N5M4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TTC9CQ8N5M4 AC087393.1-201ENST00000582896 145 ntBASIC18.57■□□□□ 0.56
TTC9CQ8N5M4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.57■□□□□ 0.56
TTC9CQ8N5M4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TTC9CQ8N5M4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.56■□□□□ 0.56
TTC9CQ8N5M4 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TTC9CQ8N5M4 FOXO3B-201ENST00000395675 1928 ntBASIC18.56■□□□□ 0.56
TTC9CQ8N5M4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
TTC9CQ8N5M4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.55■□□□□ 0.56
TTC9CQ8N5M4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TTC9CQ8N5M4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TTC9CQ8N5M4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.55■□□□□ 0.56
TTC9CQ8N5M4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TTC9CQ8N5M4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
TTC9CQ8N5M4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TTC9CQ8N5M4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TTC9CQ8N5M4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TTC9CQ8N5M4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TTC9CQ8N5M4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TTC9CQ8N5M4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TTC9CQ8N5M4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TTC9CQ8N5M4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.54■□□□□ 0.56
TTC9CQ8N5M4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
TTC9CQ8N5M4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TTC9CQ8N5M4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.53■□□□□ 0.56
TTC9CQ8N5M4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TTC9CQ8N5M4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC9CQ8N5M4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.53■□□□□ 0.56
TTC9CQ8N5M4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.53■□□□□ 0.56
TTC9CQ8N5M4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC9CQ8N5M4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
TTC9CQ8N5M4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
TTC9CQ8N5M4 MIR6089-201ENST00000616698 64 ntBASIC18.53■□□□□ 0.56
TTC9CQ8N5M4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
TTC9CQ8N5M4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC9CQ8N5M4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC9CQ8N5M4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.52■□□□□ 0.56
TTC9CQ8N5M4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TTC9CQ8N5M4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TTC9CQ8N5M4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TTC9CQ8N5M4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TTC9CQ8N5M4 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TTC9CQ8N5M4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
TTC9CQ8N5M4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TTC9CQ8N5M4 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TTC9CQ8N5M4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TTC9CQ8N5M4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.51■□□□□ 0.55
TTC9CQ8N5M4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TTC9CQ8N5M4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TTC9CQ8N5M4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TTC9CQ8N5M4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TTC9CQ8N5M4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TTC9CQ8N5M4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TTC9CQ8N5M4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TTC9CQ8N5M4 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
TTC9CQ8N5M4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TTC9CQ8N5M4 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.5■□□□□ 0.55
TTC9CQ8N5M4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.5■□□□□ 0.55
TTC9CQ8N5M4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TTC9CQ8N5M4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.5■□□□□ 0.55
TTC9CQ8N5M4 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.49■□□□□ 0.55
TTC9CQ8N5M4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.49■□□□□ 0.55
TTC9CQ8N5M4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.49■□□□□ 0.55
TTC9CQ8N5M4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC9CQ8N5M4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.49■□□□□ 0.55
TTC9CQ8N5M4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.49■□□□□ 0.55
TTC9CQ8N5M4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC9CQ8N5M4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms