Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.71■□□□□ 0.27
CSMD3Q7Z407 EXOG-217ENST00000630638 197 ntTSL 5 BASIC16.71■□□□□ 0.27
CSMD3Q7Z407 UNC93B3-201ENST00000308076 687 ntBASIC16.71■□□□□ 0.27
CSMD3Q7Z407 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.71■□□□□ 0.27
CSMD3Q7Z407 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.71■□□□□ 0.27
CSMD3Q7Z407 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSMD3Q7Z407 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC16.71■□□□□ 0.27
CSMD3Q7Z407 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
CSMD3Q7Z407 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.7■□□□□ 0.26
CSMD3Q7Z407 TFPT-201ENST00000391757 774 ntTSL 5 BASIC16.7■□□□□ 0.26
CSMD3Q7Z407 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSMD3Q7Z407 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC16.7■□□□□ 0.26
CSMD3Q7Z407 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSMD3Q7Z407 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSMD3Q7Z407 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CSMD3Q7Z407 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC16.7■□□□□ 0.26
CSMD3Q7Z407 AC024257.2-201ENST00000549699 147 ntBASIC16.7■□□□□ 0.26
CSMD3Q7Z407 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CSMD3Q7Z407 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC16.69■□□□□ 0.26
CSMD3Q7Z407 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSMD3Q7Z407 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSMD3Q7Z407 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.69■□□□□ 0.26
CSMD3Q7Z407 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSMD3Q7Z407 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.69■□□□□ 0.26
CSMD3Q7Z407 PBX2P1-201ENST00000493219 1291 ntBASIC16.69■□□□□ 0.26
CSMD3Q7Z407 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC16.69■□□□□ 0.26
CSMD3Q7Z407 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC16.68■□□□□ 0.26
CSMD3Q7Z407 DRD5P2-201ENST00000421395 2012 ntBASIC16.68■□□□□ 0.26
CSMD3Q7Z407 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CSMD3Q7Z407 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CSMD3Q7Z407 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CSMD3Q7Z407 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC16.68■□□□□ 0.26
CSMD3Q7Z407 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC16.68■□□□□ 0.26
CSMD3Q7Z407 AK3-203ENST00000447596 705 ntTSL 2 BASIC16.68■□□□□ 0.26
CSMD3Q7Z407 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSMD3Q7Z407 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CSMD3Q7Z407 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CSMD3Q7Z407 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CSMD3Q7Z407 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.67■□□□□ 0.26
CSMD3Q7Z407 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.67■□□□□ 0.26
CSMD3Q7Z407 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CSMD3Q7Z407 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSMD3Q7Z407 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC16.66■□□□□ 0.26
CSMD3Q7Z407 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSMD3Q7Z407 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSMD3Q7Z407 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSMD3Q7Z407 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CSMD3Q7Z407 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSMD3Q7Z407 AC105265.2-201ENST00000467189 838 ntBASIC16.66■□□□□ 0.26
CSMD3Q7Z407 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC16.66■□□□□ 0.26
CSMD3Q7Z407 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.66■□□□□ 0.26
CSMD3Q7Z407 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.66■□□□□ 0.26
CSMD3Q7Z407 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CSMD3Q7Z407 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CSMD3Q7Z407 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.66■□□□□ 0.26
CSMD3Q7Z407 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSMD3Q7Z407 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CSMD3Q7Z407 AL136967.2-201ENST00000623968 743 ntBASIC16.65■□□□□ 0.26
CSMD3Q7Z407 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSMD3Q7Z407 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.65■□□□□ 0.26
CSMD3Q7Z407 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.65■□□□□ 0.26
CSMD3Q7Z407 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSMD3Q7Z407 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSMD3Q7Z407 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSMD3Q7Z407 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSMD3Q7Z407 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CSMD3Q7Z407 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
CSMD3Q7Z407 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSMD3Q7Z407 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSMD3Q7Z407 MIR939-201ENST00000401314 82 ntBASIC16.64■□□□□ 0.25
CSMD3Q7Z407 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSMD3Q7Z407 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSMD3Q7Z407 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSMD3Q7Z407 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CSMD3Q7Z407 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CSMD3Q7Z407 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSMD3Q7Z407 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSMD3Q7Z407 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSMD3Q7Z407 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSMD3Q7Z407 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CSMD3Q7Z407 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CSMD3Q7Z407 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
CSMD3Q7Z407 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSMD3Q7Z407 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.63■□□□□ 0.25
CSMD3Q7Z407 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSMD3Q7Z407 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSMD3Q7Z407 KRT18P10-201ENST00000388836 1287 ntBASIC16.63■□□□□ 0.25
CSMD3Q7Z407 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
CSMD3Q7Z407 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CSMD3Q7Z407 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CSMD3Q7Z407 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSMD3Q7Z407 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSMD3Q7Z407 CLTA-206ENST00000466396 695 ntTSL 2 BASIC16.62■□□□□ 0.25
CSMD3Q7Z407 SNX5-217ENST00000606557 1087 ntBASIC16.62■□□□□ 0.25
CSMD3Q7Z407 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CSMD3Q7Z407 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.61■□□□□ 0.25
CSMD3Q7Z407 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSMD3Q7Z407 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.61■□□□□ 0.25
CSMD3Q7Z407 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.61■□□□□ 0.25
CSMD3Q7Z407 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms