Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBR4Q5T4S7 AC027682.1-201ENST00000562846 899 ntBASIC13.35□□□□□ -0.27
UBR4Q5T4S7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC13.35□□□□□ -0.27
UBR4Q5T4S7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBR4Q5T4S7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBR4Q5T4S7 CD72-202ENST00000378430 585 ntTSL 3 BASIC13.35□□□□□ -0.27
UBR4Q5T4S7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC13.35□□□□□ -0.27
UBR4Q5T4S7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBR4Q5T4S7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC13.34□□□□□ -0.27
UBR4Q5T4S7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC13.34□□□□□ -0.27
UBR4Q5T4S7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UBR4Q5T4S7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
UBR4Q5T4S7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC13.34□□□□□ -0.27
UBR4Q5T4S7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
UBR4Q5T4S7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
UBR4Q5T4S7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.34□□□□□ -0.27
UBR4Q5T4S7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC13.34□□□□□ -0.27
UBR4Q5T4S7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC13.34□□□□□ -0.27
UBR4Q5T4S7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
UBR4Q5T4S7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
UBR4Q5T4S7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UBR4Q5T4S7 MIR4651-201ENST00000582622 73 ntBASIC13.33□□□□□ -0.28
UBR4Q5T4S7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC13.33□□□□□ -0.28
UBR4Q5T4S7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
UBR4Q5T4S7 AL355802.2-201ENST00000402069 882 ntBASIC13.33□□□□□ -0.28
UBR4Q5T4S7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC13.33□□□□□ -0.28
UBR4Q5T4S7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC13.33□□□□□ -0.28
UBR4Q5T4S7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC13.33□□□□□ -0.28
UBR4Q5T4S7 WHAMMP3-201ENST00000611636 1609 ntBASIC13.32□□□□□ -0.28
UBR4Q5T4S7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBR4Q5T4S7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC13.32□□□□□ -0.28
UBR4Q5T4S7 SMUG1P1-201ENST00000590640 811 ntBASIC13.32□□□□□ -0.28
UBR4Q5T4S7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC13.32□□□□□ -0.28
UBR4Q5T4S7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
UBR4Q5T4S7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBR4Q5T4S7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC13.32□□□□□ -0.28
UBR4Q5T4S7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBR4Q5T4S7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC13.32□□□□□ -0.28
UBR4Q5T4S7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
UBR4Q5T4S7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC13.32□□□□□ -0.28
UBR4Q5T4S7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBR4Q5T4S7 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBR4Q5T4S7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBR4Q5T4S7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBR4Q5T4S7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
UBR4Q5T4S7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
UBR4Q5T4S7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBR4Q5T4S7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC13.3□□□□□ -0.28
UBR4Q5T4S7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC13.3□□□□□ -0.28
UBR4Q5T4S7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC13.3□□□□□ -0.28
UBR4Q5T4S7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBR4Q5T4S7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBR4Q5T4S7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC13.3□□□□□ -0.28
UBR4Q5T4S7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBR4Q5T4S7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBR4Q5T4S7 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBR4Q5T4S7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC13.29□□□□□ -0.28
UBR4Q5T4S7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC13.29□□□□□ -0.28
UBR4Q5T4S7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBR4Q5T4S7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC13.29□□□□□ -0.28
UBR4Q5T4S7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
UBR4Q5T4S7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC13.29□□□□□ -0.28
UBR4Q5T4S7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC13.29□□□□□ -0.28
UBR4Q5T4S7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
UBR4Q5T4S7 CD99P1-205ENST00000527459 561 ntBASIC13.29□□□□□ -0.28
UBR4Q5T4S7 AL359504.2-201ENST00000605506 1601 ntBASIC13.29□□□□□ -0.28
UBR4Q5T4S7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UBR4Q5T4S7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBR4Q5T4S7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
UBR4Q5T4S7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBR4Q5T4S7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC13.28□□□□□ -0.28
UBR4Q5T4S7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBR4Q5T4S7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBR4Q5T4S7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBR4Q5T4S7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
UBR4Q5T4S7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBR4Q5T4S7 AK1-201ENST00000223836 736 ntTSL 3 BASIC13.28□□□□□ -0.28
UBR4Q5T4S7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC13.28□□□□□ -0.28
UBR4Q5T4S7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC13.28□□□□□ -0.28
UBR4Q5T4S7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC13.27□□□□□ -0.28
UBR4Q5T4S7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
UBR4Q5T4S7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBR4Q5T4S7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC13.27□□□□□ -0.29
UBR4Q5T4S7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBR4Q5T4S7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBR4Q5T4S7 KRT18P6-201ENST00000555540 1265 ntBASIC13.26□□□□□ -0.29
UBR4Q5T4S7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBR4Q5T4S7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBR4Q5T4S7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBR4Q5T4S7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
UBR4Q5T4S7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC13.26□□□□□ -0.29
UBR4Q5T4S7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBR4Q5T4S7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBR4Q5T4S7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBR4Q5T4S7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC13.26□□□□□ -0.29
UBR4Q5T4S7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UBR4Q5T4S7 MIR4767-201ENST00000582827 78 ntBASIC13.26□□□□□ -0.29
UBR4Q5T4S7 CROCCP5-201ENST00000436658 830 ntBASIC13.25□□□□□ -0.29
UBR4Q5T4S7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC13.25□□□□□ -0.29
UBR4Q5T4S7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms