Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3DO95716 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3DO95716 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RAB3DO95716 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3DO95716 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3DO95716 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3DO95716 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3DO95716 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3DO95716 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3DO95716 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.95■□□□□ 0.78
RAB3DO95716 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3DO95716 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3DO95716 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3DO95716 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB3DO95716 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB3DO95716 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
RAB3DO95716 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB3DO95716 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RAB3DO95716 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAB3DO95716 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB3DO95716 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RAB3DO95716 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.94■□□□□ 0.78
RAB3DO95716 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB3DO95716 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB3DO95716 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAB3DO95716 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB3DO95716 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB3DO95716 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB3DO95716 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.93■□□□□ 0.78
RAB3DO95716 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAB3DO95716 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.93■□□□□ 0.78
RAB3DO95716 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RAB3DO95716 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB3DO95716 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB3DO95716 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.92■□□□□ 0.78
RAB3DO95716 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RAB3DO95716 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.92■□□□□ 0.78
RAB3DO95716 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAB3DO95716 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB3DO95716 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.92■□□□□ 0.78
RAB3DO95716 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB3DO95716 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB3DO95716 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB3DO95716 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB3DO95716 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RAB3DO95716 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB3DO95716 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB3DO95716 ABCB10P4-201ENST00000566803 2184 ntBASIC19.91■□□□□ 0.78
RAB3DO95716 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB3DO95716 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RAB3DO95716 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RAB3DO95716 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB3DO95716 AL359258.2-201ENST00000564063 1566 ntBASIC19.91■□□□□ 0.78
RAB3DO95716 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3DO95716 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3DO95716 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.9■□□□□ 0.78
RAB3DO95716 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3DO95716 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3DO95716 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3DO95716 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3DO95716 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RAB3DO95716 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3DO95716 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3DO95716 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3DO95716 AC087741.3-201ENST00000624270 1347 ntBASIC19.9■□□□□ 0.78
RAB3DO95716 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3DO95716 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.9■□□□□ 0.78
RAB3DO95716 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RAB3DO95716 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3DO95716 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3DO95716 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3DO95716 CLDN5-201ENST00000403084 2357 ntBASIC19.9■□□□□ 0.78
RAB3DO95716 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3DO95716 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB3DO95716 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB3DO95716 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB3DO95716 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RAB3DO95716 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB3DO95716 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RAB3DO95716 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RAB3DO95716 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.89■□□□□ 0.77
RAB3DO95716 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB3DO95716 AP006261.1-201ENST00000584783 668 ntBASIC19.89■□□□□ 0.77
RAB3DO95716 MIR219A2-201ENST00000608502 1504 ntBASIC19.89■□□□□ 0.77
RAB3DO95716 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RAB3DO95716 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB3DO95716 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB3DO95716 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RAB3DO95716 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB3DO95716 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.88■□□□□ 0.77
RAB3DO95716 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB3DO95716 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB3DO95716 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB3DO95716 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB3DO95716 AC021231.2-201ENST00000594613 730 ntBASIC19.88■□□□□ 0.77
RAB3DO95716 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB3DO95716 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAB3DO95716 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.88■□□□□ 0.77
RAB3DO95716 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB3DO95716 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms