Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HCN1O60741 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.91■■□□□ 1.1
HCN1O60741 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HCN1O60741 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HCN1O60741 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
HCN1O60741 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HCN1O60741 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.9■■□□□ 1.1
HCN1O60741 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.9■■□□□ 1.1
HCN1O60741 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.9■■□□□ 1.1
HCN1O60741 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.9■■□□□ 1.1
HCN1O60741 AC010980.1-201ENST00000587192 1142 ntBASIC21.9■■□□□ 1.1
HCN1O60741 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HCN1O60741 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HCN1O60741 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HCN1O60741 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
HCN1O60741 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HCN1O60741 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HCN1O60741 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.89■■□□□ 1.09
HCN1O60741 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HCN1O60741 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HCN1O60741 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
HCN1O60741 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HCN1O60741 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
HCN1O60741 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HCN1O60741 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
HCN1O60741 KRT18P10-201ENST00000388836 1287 ntBASIC21.88■■□□□ 1.09
HCN1O60741 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HCN1O60741 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HCN1O60741 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.87■■□□□ 1.09
HCN1O60741 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
HCN1O60741 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
HCN1O60741 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
HCN1O60741 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HCN1O60741 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HCN1O60741 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HCN1O60741 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
HCN1O60741 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
HCN1O60741 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
HCN1O60741 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.86■■□□□ 1.09
HCN1O60741 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.86■■□□□ 1.09
HCN1O60741 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
HCN1O60741 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HCN1O60741 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HCN1O60741 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HCN1O60741 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HCN1O60741 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HCN1O60741 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
HCN1O60741 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
HCN1O60741 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HCN1O60741 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HCN1O60741 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HCN1O60741 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HCN1O60741 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.85■■□□□ 1.09
HCN1O60741 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
HCN1O60741 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HCN1O60741 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.85■■□□□ 1.09
HCN1O60741 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
HCN1O60741 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HCN1O60741 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
HCN1O60741 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.84■■□□□ 1.09
HCN1O60741 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HCN1O60741 AC087393.1-201ENST00000582896 145 ntBASIC21.84■■□□□ 1.09
HCN1O60741 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HCN1O60741 AC096887.2-201ENST00000623443 1957 ntBASIC21.84■■□□□ 1.09
HCN1O60741 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HCN1O60741 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HCN1O60741 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.84■■□□□ 1.09
HCN1O60741 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HCN1O60741 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HCN1O60741 AC142381.3-201ENST00000568208 1670 ntBASIC21.83■■□□□ 1.09
HCN1O60741 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HCN1O60741 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HCN1O60741 YBX1P4-201ENST00000392794 808 ntBASIC21.83■■□□□ 1.09
HCN1O60741 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HCN1O60741 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.83■■□□□ 1.09
HCN1O60741 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.83■■□□□ 1.09
HCN1O60741 AC019171.1-201ENST00000601251 1056 ntBASIC21.83■■□□□ 1.09
HCN1O60741 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HCN1O60741 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.09
HCN1O60741 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HCN1O60741 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HCN1O60741 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HCN1O60741 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HCN1O60741 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.82■■□□□ 1.08
HCN1O60741 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HCN1O60741 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HCN1O60741 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HCN1O60741 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HCN1O60741 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HCN1O60741 RPS2P7-201ENST00000447334 885 ntBASIC21.81■■□□□ 1.08
HCN1O60741 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.81■■□□□ 1.08
HCN1O60741 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.81■■□□□ 1.08
HCN1O60741 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
HCN1O60741 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HCN1O60741 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HCN1O60741 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.8■■□□□ 1.08
HCN1O60741 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HCN1O60741 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
HCN1O60741 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.8■■□□□ 1.08
HCN1O60741 MIR4508-201ENST00000584178 70 ntBASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms