Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 ATO2YNR002C 849 nt8.27□□□□□ -1.08
TY1B-HO13535 YAP1YML007W 1953 nt8.27□□□□□ -1.09
TY1B-HO13535 RPP0YLR340W 939 nt8.27□□□□□ -1.09
TY1B-HO13535 SMF2YHR050W 1650 nt8.27□□□□□ -1.09
TY1B-HO13535 YML133CYML133C 4125 nt8.26□□□□□ -1.09
TY1B-HO13535 UBC4YBR082C 447 nt8.26□□□□□ -1.09
TY1B-HO13535 SCW4YGR279C 1161 nt8.25□□□□□ -1.09
TY1B-HO13535 YIL060WYIL060W 435 nt8.25□□□□□ -1.09
TY1B-HO13535 YMR111CYMR111C 1389 nt8.25□□□□□ -1.09
TY1B-HO13535 PYC1YGL062W 3537 nt8.25□□□□□ -1.09
TY1B-HO13535 YEH1YLL012W 1722 nt8.25□□□□□ -1.09
TY1B-HO13535 MNN10YDR245W 1182 nt8.24□□□□□ -1.09
TY1B-HO13535 YPS7YDR349C 1791 nt8.23□□□□□ -1.09
TY1B-HO13535 PHO3YBR092C 1404 nt8.23□□□□□ -1.09
TY1B-HO13535 GFD1YMR255W 567 nt8.23□□□□□ -1.09
TY1B-HO13535 VMA4YOR332W 702 nt8.23□□□□□ -1.09
TY1B-HO13535 YNR040WYNR040W 771 nt8.22□□□□□ -1.09
TY1B-HO13535 AIM10YER087W 1731 nt8.21□□□□□ -1.09
TY1B-HO13535 SCT1YBL011W 2280 nt8.2□□□□□ -1.1
TY1B-HO13535 STL1YDR536W 1710 nt8.2□□□□□ -1.1
TY1B-HO13535 SCM3YDL139C 672 nt8.2□□□□□ -1.1
TY1B-HO13535 MRPL1YDR116C 858 nt8.2□□□□□ -1.1
TY1B-HO13535 MRS1YIR021W 1092 nt8.19□□□□□ -1.1
TY1B-HO13535 BAP2YBR068C 1830 nt8.18□□□□□ -1.1
TY1B-HO13535 PFK2YMR205C 2880 nt8.18□□□□□ -1.1
TY1B-HO13535 GGC1YDL198C 903 nt8.17□□□□□ -1.1
TY1B-HO13535 LYS5YGL154C 819 nt8.17□□□□□ -1.1
TY1B-HO13535 GEP3YOR205C 1671 nt8.17□□□□□ -1.1
TY1B-HO13535 DRN1YGR093W 1524 nt8.17□□□□□ -1.1
TY1B-HO13535 YOL036WYOL036W 2286 nt8.17□□□□□ -1.1
TY1B-HO13535 MVD1YNR043W 1191 nt8.17□□□□□ -1.1
TY1B-HO13535 FET4YMR319C 1659 nt8.16□□□□□ -1.1
TY1B-HO13535 ICS3YJL077C 396 nt8.16□□□□□ -1.1
TY1B-HO13535 ISC1YER019W 1434 nt8.16□□□□□ -1.1
TY1B-HO13535 AVO1YOL078W 3531 nt8.15□□□□□ -1.1
TY1B-HO13535 ARN1YHL040C 1884 nt8.15□□□□□ -1.11
TY1B-HO13535 YIL171W-AYIL171W-A 453 nt8.15□□□□□ -1.11
TY1B-HO13535 YJL220WYJL220W 453 nt8.15□□□□□ -1.11
TY1B-HO13535 OAC1YKL120W 975 nt8.15□□□□□ -1.11
TY1B-HO13535 OAZ1YPL052W 879 nt8.15□□□□□ -1.11
TY1B-HO13535 MLC2YPR188C 492 nt8.15□□□□□ -1.11
TY1B-HO13535 MID1YNL291C 1647 nt8.14□□□□□ -1.11
TY1B-HO13535 YOR389WYOR389W 1875 nt8.14□□□□□ -1.11
TY1B-HO13535 GYP1YOR070C 1914 nt8.14□□□□□ -1.11
TY1B-HO13535 SPC34YKR037C 888 nt8.13□□□□□ -1.11
TY1B-HO13535 UTP7YER082C 1665 nt8.13□□□□□ -1.11
TY1B-HO13535 TAF10YDR167W 621 nt8.11□□□□□ -1.11
TY1B-HO13535 MTQ1YNL063W 945 nt8.1□□□□□ -1.11
TY1B-HO13535 GWT1YJL091C 1473 nt8.1□□□□□ -1.11
TY1B-HO13535 HSF1YGL073W 2502 nt8.1□□□□□ -1.11
TY1B-HO13535 LCP5YER127W 1074 nt8.1□□□□□ -1.11
TY1B-HO13535 PRP24YMR268C 1335 nt8.09□□□□□ -1.11
TY1B-HO13535 JEM1YJL073W 1938 nt8.09□□□□□ -1.11
TY1B-HO13535 ATM1YMR301C 2073 nt8.08□□□□□ -1.12
TY1B-HO13535 FAU1YER183C 636 nt8.08□□□□□ -1.12
TY1B-HO13535 SNZ3YFL059W 897 nt8.08□□□□□ -1.12
TY1B-HO13535 SNZ2YNL333W 897 nt8.08□□□□□ -1.12
TY1B-HO13535 BSP1YPR171W 1731 nt8.08□□□□□ -1.12
TY1B-HO13535 WTM1YOR230W 1314 nt8.08□□□□□ -1.12
TY1B-HO13535 TOM71YHR117W 1920 nt8.08□□□□□ -1.12
TY1B-HO13535 PRP31YGR091W 1485 nt8.08□□□□□ -1.12
TY1B-HO13535 VPS29YHR012W 849 nt8.07□□□□□ -1.12
TY1B-HO13535 FRE6YLL051C 2139 nt8.07□□□□□ -1.12
TY1B-HO13535 UBA3YPR066W 900 nt8.06□□□□□ -1.12
TY1B-HO13535 GPT2YKR067W 2232 nt8.06□□□□□ -1.12
TY1B-HO13535 MTQ2YDR140W 666 nt8.05□□□□□ -1.12
TY1B-HO13535 DCC1YCL016C 1143 nt8.05□□□□□ -1.12
TY1B-HO13535 ERG4YGL012W 1422 nt8.04□□□□□ -1.12
TY1B-HO13535 SLC1YDL052C 912 nt8.04□□□□□ -1.12
TY1B-HO13535 SEH1YGL100W 1050 nt8.04□□□□□ -1.12
TY1B-HO13535 YNG2YHR090C 849 nt8.04□□□□□ -1.12
TY1B-HO13535 ARG8YOL140W 1272 nt8.04□□□□□ -1.12
TY1B-HO13535 MCH4YOL119C 1506 nt8.04□□□□□ -1.12
TY1B-HO13535 PEP4YPL154C 1218 nt8.03□□□□□ -1.12
TY1B-HO13535 YIL067CYIL067C 2037 nt8.01□□□□□ -1.13
TY1B-HO13535 SRV2YNL138W 1581 nt8.01□□□□□ -1.13
TY1B-HO13535 ACF2YLR144C 2340 nt8.01□□□□□ -1.13
TY1B-HO13535 MRC1YCL061C 3291 nt8.01□□□□□ -1.13
TY1B-HO13535 RPN7YPR108W 1290 nt8.01□□□□□ -1.13
TY1B-HO13535 YPR123CYPR123C 435 nt8.01□□□□□ -1.13
TY1B-HO13535 PXR1YGR280C 816 nt8□□□□□ -1.13
TY1B-HO13535 HRP1YOL123W 1605 nt8□□□□□ -1.13
TY1B-HO13535 DIT2YDR402C 1470 nt8□□□□□ -1.13
TY1B-HO13535 VAM7YGL212W 951 nt7.99□□□□□ -1.13
TY1B-HO13535 GDT1YBR187W 843 nt7.99□□□□□ -1.13
TY1B-HO13535 BUD8YLR353W 1812 nt7.98□□□□□ -1.13
TY1B-HO13535 YDR053WYDR053W 396 nt7.98□□□□□ -1.13
TY1B-HO13535 ULA1YPL003W 1389 nt7.98□□□□□ -1.13
TY1B-HO13535 QDR3YBR043C 2070 nt7.98□□□□□ -1.13
TY1B-HO13535 YRF1-4YLR466W 4149 nt7.98□□□□□ -1.13
TY1B-HO13535 CCS1YMR038C 750 nt7.97□□□□□ -1.13
TY1B-HO13535 AFG2YLR397C 2343 nt7.97□□□□□ -1.13
TY1B-HO13535 RPT4YOR259C 1314 nt7.97□□□□□ -1.13
TY1B-HO13535 THI4YGR144W 981 nt7.97□□□□□ -1.13
TY1B-HO13535 NHP6AYPR052C 282 nt7.97□□□□□ -1.13
TY1B-HO13535 SCO2YBR024W 906 nt7.96□□□□□ -1.14
TY1B-HO13535 TRP5YGL026C 2124 nt7.95□□□□□ -1.14
TY1B-HO13535 CKB2YOR039W 777 nt7.94□□□□□ -1.14
TY1B-HO13535 TIF5YPR041W 1218 nt7.94□□□□□ -1.14
TY1B-HO13535 YDR541CYDR541C 1035 nt7.93□□□□□ -1.14
Retrieved 100 of 7,029 protein–RNA pairs in 42 ms