Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RCCD1A6NED2 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
RCCD1A6NED2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
RCCD1A6NED2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.22■■□□□ 1.63
RCCD1A6NED2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RCCD1A6NED2 AC016575.1-201ENST00000607026 382 ntBASIC25.22■■□□□ 1.63
RCCD1A6NED2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.22■■□□□ 1.63
RCCD1A6NED2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
RCCD1A6NED2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RCCD1A6NED2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC25.22■■□□□ 1.63
RCCD1A6NED2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
RCCD1A6NED2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RCCD1A6NED2 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RCCD1A6NED2 ABHD17AP4-201ENST00000411545 909 ntBASIC25.21■■□□□ 1.63
RCCD1A6NED2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RCCD1A6NED2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
RCCD1A6NED2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.21■■□□□ 1.63
RCCD1A6NED2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RCCD1A6NED2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
RCCD1A6NED2 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RCCD1A6NED2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RCCD1A6NED2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.19■■□□□ 1.62
RCCD1A6NED2 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.19■■□□□ 1.62
RCCD1A6NED2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.19■■□□□ 1.62
RCCD1A6NED2 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.19■■□□□ 1.62
RCCD1A6NED2 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RCCD1A6NED2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RCCD1A6NED2 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.18■■□□□ 1.62
RCCD1A6NED2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.18■■□□□ 1.62
RCCD1A6NED2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.18■■□□□ 1.62
RCCD1A6NED2 AC141586.4-201ENST00000624558 1573 ntBASIC25.18■■□□□ 1.62
RCCD1A6NED2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RCCD1A6NED2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
RCCD1A6NED2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC25.17■■□□□ 1.62
RCCD1A6NED2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RCCD1A6NED2 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
RCCD1A6NED2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
RCCD1A6NED2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.17■■□□□ 1.62
RCCD1A6NED2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
RCCD1A6NED2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
RCCD1A6NED2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RCCD1A6NED2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.15■■□□□ 1.62
RCCD1A6NED2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
RCCD1A6NED2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RCCD1A6NED2 AC060814.1-201ENST00000554326 538 ntBASIC25.15■■□□□ 1.62
RCCD1A6NED2 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
RCCD1A6NED2 AC068473.5-201ENST00000616428 2072 ntBASIC25.15■■□□□ 1.62
RCCD1A6NED2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.15■■□□□ 1.62
RCCD1A6NED2 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
RCCD1A6NED2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RCCD1A6NED2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
RCCD1A6NED2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.14■■□□□ 1.62
RCCD1A6NED2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
RCCD1A6NED2 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RCCD1A6NED2 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RCCD1A6NED2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
RCCD1A6NED2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC25.13■■□□□ 1.61
RCCD1A6NED2 MIR6089-201ENST00000616698 64 ntBASIC25.13■■□□□ 1.61
RCCD1A6NED2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RCCD1A6NED2 ABCB10P4-201ENST00000566803 2184 ntBASIC25.12■■□□□ 1.61
RCCD1A6NED2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.12■■□□□ 1.61
RCCD1A6NED2 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RCCD1A6NED2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RCCD1A6NED2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RCCD1A6NED2 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RCCD1A6NED2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RCCD1A6NED2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.12■■□□□ 1.61
RCCD1A6NED2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RCCD1A6NED2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RCCD1A6NED2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC25.11■■□□□ 1.61
RCCD1A6NED2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RCCD1A6NED2 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RCCD1A6NED2 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC25.11■■□□□ 1.61
RCCD1A6NED2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
RCCD1A6NED2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
RCCD1A6NED2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
RCCD1A6NED2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RCCD1A6NED2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
RCCD1A6NED2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC25.1■■□□□ 1.61
RCCD1A6NED2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RCCD1A6NED2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.1■■□□□ 1.61
RCCD1A6NED2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
RCCD1A6NED2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.1■■□□□ 1.61
RCCD1A6NED2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RCCD1A6NED2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.09■■□□□ 1.61
RCCD1A6NED2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
RCCD1A6NED2 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
RCCD1A6NED2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RCCD1A6NED2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RCCD1A6NED2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.08■■□□□ 1.61
RCCD1A6NED2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.08■■□□□ 1.61
RCCD1A6NED2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
RCCD1A6NED2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.08■■□□□ 1.61
RCCD1A6NED2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.08■■□□□ 1.61
RCCD1A6NED2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
RCCD1A6NED2 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RCCD1A6NED2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RCCD1A6NED2 MIR3960-201ENST00000583311 91 ntBASIC25.08■■□□□ 1.61
RCCD1A6NED2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.08■■□□□ 1.61
RCCD1A6NED2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms