Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP3S1Q92572 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.85■□□□□ 0.93
AP3S1Q92572 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.85■□□□□ 0.93
AP3S1Q92572 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
AP3S1Q92572 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.85■□□□□ 0.93
AP3S1Q92572 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
AP3S1Q92572 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.84■□□□□ 0.93
AP3S1Q92572 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
AP3S1Q92572 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
AP3S1Q92572 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
AP3S1Q92572 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
AP3S1Q92572 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
AP3S1Q92572 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
AP3S1Q92572 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
AP3S1Q92572 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
AP3S1Q92572 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
AP3S1Q92572 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.83■□□□□ 0.93
AP3S1Q92572 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
AP3S1Q92572 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
AP3S1Q92572 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
AP3S1Q92572 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
AP3S1Q92572 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.82■□□□□ 0.92
AP3S1Q92572 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
AP3S1Q92572 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.82■□□□□ 0.92
AP3S1Q92572 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP3S1Q92572 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.82■□□□□ 0.92
AP3S1Q92572 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP3S1Q92572 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
AP3S1Q92572 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP3S1Q92572 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.81■□□□□ 0.92
AP3S1Q92572 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP3S1Q92572 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP3S1Q92572 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
AP3S1Q92572 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.81■□□□□ 0.92
AP3S1Q92572 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP3S1Q92572 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP3S1Q92572 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
AP3S1Q92572 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP3S1Q92572 MIR6090-201ENST00000622481 60 ntBASIC20.8■□□□□ 0.92
AP3S1Q92572 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
AP3S1Q92572 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP3S1Q92572 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP3S1Q92572 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
AP3S1Q92572 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
AP3S1Q92572 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
AP3S1Q92572 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP3S1Q92572 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP3S1Q92572 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP3S1Q92572 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
AP3S1Q92572 PKD1P6-201ENST00000343738 4769 ntBASIC20.78■□□□□ 0.92
AP3S1Q92572 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
AP3S1Q92572 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP3S1Q92572 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP3S1Q92572 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP3S1Q92572 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP3S1Q92572 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
AP3S1Q92572 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP3S1Q92572 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP3S1Q92572 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP3S1Q92572 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP3S1Q92572 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
AP3S1Q92572 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
AP3S1Q92572 SLC6A10P-202ENST00000431994 2058 ntBASIC20.77■□□□□ 0.92
AP3S1Q92572 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
AP3S1Q92572 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
AP3S1Q92572 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
AP3S1Q92572 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
AP3S1Q92572 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.77■□□□□ 0.92
AP3S1Q92572 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
AP3S1Q92572 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
AP3S1Q92572 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.77■□□□□ 0.92
AP3S1Q92572 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
AP3S1Q92572 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.77■□□□□ 0.92
AP3S1Q92572 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
AP3S1Q92572 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
AP3S1Q92572 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
AP3S1Q92572 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
AP3S1Q92572 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
AP3S1Q92572 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
AP3S1Q92572 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
AP3S1Q92572 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
AP3S1Q92572 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
AP3S1Q92572 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.76■□□□□ 0.91
AP3S1Q92572 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
AP3S1Q92572 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
AP3S1Q92572 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
AP3S1Q92572 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP3S1Q92572 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
AP3S1Q92572 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.75■□□□□ 0.91
AP3S1Q92572 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP3S1Q92572 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.75■□□□□ 0.91
AP3S1Q92572 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.75■□□□□ 0.91
AP3S1Q92572 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP3S1Q92572 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP3S1Q92572 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
AP3S1Q92572 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.75■□□□□ 0.91
AP3S1Q92572 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP3S1Q92572 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
AP3S1Q92572 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP3S1Q92572 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms