Protein–RNA interactions for Protein: Q8N535

LINC00471, Putative uncharacterized protein encoded by LINC00471, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00471Q8N535 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.66■■□□□ 1.06
LINC00471Q8N535 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.66■■□□□ 1.06
LINC00471Q8N535 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.65■■□□□ 1.06
LINC00471Q8N535 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LINC00471Q8N535 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LINC00471Q8N535 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.65■■□□□ 1.06
LINC00471Q8N535 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LINC00471Q8N535 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
LINC00471Q8N535 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LINC00471Q8N535 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
LINC00471Q8N535 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.64■■□□□ 1.06
LINC00471Q8N535 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.64■■□□□ 1.06
LINC00471Q8N535 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LINC00471Q8N535 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
LINC00471Q8N535 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LINC00471Q8N535 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
LINC00471Q8N535 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LINC00471Q8N535 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
LINC00471Q8N535 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
LINC00471Q8N535 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LINC00471Q8N535 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LINC00471Q8N535 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LINC00471Q8N535 MIR3960-201ENST00000583311 91 ntBASIC21.63■■□□□ 1.05
LINC00471Q8N535 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LINC00471Q8N535 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
LINC00471Q8N535 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LINC00471Q8N535 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.62■■□□□ 1.05
LINC00471Q8N535 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LINC00471Q8N535 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LINC00471Q8N535 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LINC00471Q8N535 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LINC00471Q8N535 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LINC00471Q8N535 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LINC00471Q8N535 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LINC00471Q8N535 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.61■■□□□ 1.05
LINC00471Q8N535 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
LINC00471Q8N535 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LINC00471Q8N535 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LINC00471Q8N535 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LINC00471Q8N535 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.6■■□□□ 1.05
LINC00471Q8N535 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
LINC00471Q8N535 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LINC00471Q8N535 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LINC00471Q8N535 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.6■■□□□ 1.05
LINC00471Q8N535 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
LINC00471Q8N535 AC025884.2-201ENST00000553429 711 ntBASIC21.6■■□□□ 1.05
LINC00471Q8N535 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.6■■□□□ 1.05
LINC00471Q8N535 MIR6089-201ENST00000616698 64 ntBASIC21.6■■□□□ 1.05
LINC00471Q8N535 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LINC00471Q8N535 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.6■■□□□ 1.05
LINC00471Q8N535 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LINC00471Q8N535 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.59■■□□□ 1.05
LINC00471Q8N535 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LINC00471Q8N535 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
LINC00471Q8N535 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.59■■□□□ 1.05
LINC00471Q8N535 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
LINC00471Q8N535 MIR3648-2-201ENST00000581792 180 ntBASIC21.59■■□□□ 1.05
LINC00471Q8N535 MIR3648-1-201ENST00000615959 180 ntBASIC21.59■■□□□ 1.05
LINC00471Q8N535 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.59■■□□□ 1.05
LINC00471Q8N535 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.59■■□□□ 1.05
LINC00471Q8N535 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LINC00471Q8N535 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
LINC00471Q8N535 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LINC00471Q8N535 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
LINC00471Q8N535 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LINC00471Q8N535 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LINC00471Q8N535 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LINC00471Q8N535 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
LINC00471Q8N535 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.58■■□□□ 1.04
LINC00471Q8N535 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LINC00471Q8N535 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
LINC00471Q8N535 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LINC00471Q8N535 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LINC00471Q8N535 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LINC00471Q8N535 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.57■■□□□ 1.04
LINC00471Q8N535 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.57■■□□□ 1.04
LINC00471Q8N535 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LINC00471Q8N535 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
LINC00471Q8N535 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.57■■□□□ 1.04
LINC00471Q8N535 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LINC00471Q8N535 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINC00471Q8N535 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINC00471Q8N535 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINC00471Q8N535 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINC00471Q8N535 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINC00471Q8N535 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
LINC00471Q8N535 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.56■■□□□ 1.04
LINC00471Q8N535 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINC00471Q8N535 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINC00471Q8N535 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.56■■□□□ 1.04
LINC00471Q8N535 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.55■■□□□ 1.04
LINC00471Q8N535 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LINC00471Q8N535 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LINC00471Q8N535 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LINC00471Q8N535 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
LINC00471Q8N535 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.55■■□□□ 1.04
LINC00471Q8N535 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.55■■□□□ 1.04
LINC00471Q8N535 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
LINC00471Q8N535 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LINC00471Q8N535 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms