Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
LIMS2Q7Z4I7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
LIMS2Q7Z4I7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
LIMS2Q7Z4I7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.37■■□□□ 1.65
LIMS2Q7Z4I7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
LIMS2Q7Z4I7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.37■■□□□ 1.65
LIMS2Q7Z4I7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
LIMS2Q7Z4I7 AC022616.5-201ENST00000518796 181 ntBASIC25.37■■□□□ 1.65
LIMS2Q7Z4I7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25.37■■□□□ 1.65
LIMS2Q7Z4I7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
LIMS2Q7Z4I7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC25.37■■□□□ 1.65
LIMS2Q7Z4I7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
LIMS2Q7Z4I7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.37■■□□□ 1.65
LIMS2Q7Z4I7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
LIMS2Q7Z4I7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
LIMS2Q7Z4I7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25.36■■□□□ 1.65
LIMS2Q7Z4I7 AC103724.3-201ENST00000564481 992 ntBASIC25.36■■□□□ 1.65
LIMS2Q7Z4I7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
LIMS2Q7Z4I7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.36■■□□□ 1.65
LIMS2Q7Z4I7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
LIMS2Q7Z4I7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.35■■□□□ 1.65
LIMS2Q7Z4I7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
LIMS2Q7Z4I7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
LIMS2Q7Z4I7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
LIMS2Q7Z4I7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
LIMS2Q7Z4I7 YBX1P4-201ENST00000392794 808 ntBASIC25.34■■□□□ 1.65
LIMS2Q7Z4I7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC25.34■■□□□ 1.65
LIMS2Q7Z4I7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LIMS2Q7Z4I7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
LIMS2Q7Z4I7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.33■■□□□ 1.65
LIMS2Q7Z4I7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
LIMS2Q7Z4I7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
LIMS2Q7Z4I7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
LIMS2Q7Z4I7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC25.33■■□□□ 1.65
LIMS2Q7Z4I7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
LIMS2Q7Z4I7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
LIMS2Q7Z4I7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC25.33■■□□□ 1.65
LIMS2Q7Z4I7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.32■■□□□ 1.64
LIMS2Q7Z4I7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
LIMS2Q7Z4I7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
LIMS2Q7Z4I7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25.31■■□□□ 1.64
LIMS2Q7Z4I7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
LIMS2Q7Z4I7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
LIMS2Q7Z4I7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LIMS2Q7Z4I7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC25.31■■□□□ 1.64
LIMS2Q7Z4I7 AL592295.1-201ENST00000400984 884 ntBASIC25.3■■□□□ 1.64
LIMS2Q7Z4I7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25.3■■□□□ 1.64
LIMS2Q7Z4I7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC25.3■■□□□ 1.64
LIMS2Q7Z4I7 AL451085.2-201ENST00000605085 799 ntBASIC25.3■■□□□ 1.64
LIMS2Q7Z4I7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
LIMS2Q7Z4I7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.29■■□□□ 1.64
LIMS2Q7Z4I7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.29■■□□□ 1.64
LIMS2Q7Z4I7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.29■■□□□ 1.64
LIMS2Q7Z4I7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.29■■□□□ 1.64
LIMS2Q7Z4I7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
LIMS2Q7Z4I7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LIMS2Q7Z4I7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LIMS2Q7Z4I7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.28■■□□□ 1.64
LIMS2Q7Z4I7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LIMS2Q7Z4I7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LIMS2Q7Z4I7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC25.28■■□□□ 1.64
LIMS2Q7Z4I7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LIMS2Q7Z4I7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.28■■□□□ 1.64
LIMS2Q7Z4I7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LIMS2Q7Z4I7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
LIMS2Q7Z4I7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LIMS2Q7Z4I7 KRT18P24-201ENST00000344739 1156 ntBASIC25.27■■□□□ 1.64
LIMS2Q7Z4I7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LIMS2Q7Z4I7 FOXO3B-201ENST00000395675 1928 ntBASIC25.27■■□□□ 1.64
LIMS2Q7Z4I7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
LIMS2Q7Z4I7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.27■■□□□ 1.64
LIMS2Q7Z4I7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
LIMS2Q7Z4I7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
LIMS2Q7Z4I7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
LIMS2Q7Z4I7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
LIMS2Q7Z4I7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
LIMS2Q7Z4I7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
LIMS2Q7Z4I7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
LIMS2Q7Z4I7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
LIMS2Q7Z4I7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
LIMS2Q7Z4I7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
LIMS2Q7Z4I7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
LIMS2Q7Z4I7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
LIMS2Q7Z4I7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
LIMS2Q7Z4I7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC25.23■■□□□ 1.63
LIMS2Q7Z4I7 AL031848.2-201ENST00000607670 837 ntBASIC25.23■■□□□ 1.63
LIMS2Q7Z4I7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
LIMS2Q7Z4I7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC25.22■■□□□ 1.63
LIMS2Q7Z4I7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
LIMS2Q7Z4I7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
LIMS2Q7Z4I7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
LIMS2Q7Z4I7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
LIMS2Q7Z4I7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
LIMS2Q7Z4I7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
LIMS2Q7Z4I7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
LIMS2Q7Z4I7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.21■■□□□ 1.63
LIMS2Q7Z4I7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
LIMS2Q7Z4I7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
LIMS2Q7Z4I7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.2■■□□□ 1.63
LIMS2Q7Z4I7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms