Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
HTR3AP46098 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HTR3AP46098 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
HTR3AP46098 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
HTR3AP46098 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HTR3AP46098 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HTR3AP46098 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HTR3AP46098 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HTR3AP46098 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HTR3AP46098 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HTR3AP46098 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
HTR3AP46098 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.79■■□□□ 1.08
HTR3AP46098 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
HTR3AP46098 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HTR3AP46098 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
HTR3AP46098 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HTR3AP46098 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HTR3AP46098 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HTR3AP46098 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.78■■□□□ 1.08
HTR3AP46098 KRT18P10-201ENST00000388836 1287 ntBASIC21.78■■□□□ 1.08
HTR3AP46098 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
HTR3AP46098 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.78■■□□□ 1.08
HTR3AP46098 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.78■■□□□ 1.08
HTR3AP46098 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HTR3AP46098 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HTR3AP46098 AC096887.2-201ENST00000623443 1957 ntBASIC21.78■■□□□ 1.08
HTR3AP46098 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HTR3AP46098 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.77■■□□□ 1.08
HTR3AP46098 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HTR3AP46098 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
HTR3AP46098 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HTR3AP46098 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.77■■□□□ 1.08
HTR3AP46098 AC133552.2-201ENST00000619106 1032 ntBASIC21.77■■□□□ 1.08
HTR3AP46098 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
HTR3AP46098 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
HTR3AP46098 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
HTR3AP46098 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HTR3AP46098 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.76■■□□□ 1.07
HTR3AP46098 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HTR3AP46098 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
HTR3AP46098 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HTR3AP46098 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HTR3AP46098 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HTR3AP46098 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HTR3AP46098 AC009831.1-201ENST00000580420 1582 ntBASIC21.75■■□□□ 1.07
HTR3AP46098 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
HTR3AP46098 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HTR3AP46098 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.75■■□□□ 1.07
HTR3AP46098 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
HTR3AP46098 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HTR3AP46098 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
HTR3AP46098 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HTR3AP46098 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.74■■□□□ 1.07
HTR3AP46098 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HTR3AP46098 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
HTR3AP46098 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.74■■□□□ 1.07
HTR3AP46098 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HTR3AP46098 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
HTR3AP46098 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.73■■□□□ 1.07
HTR3AP46098 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HTR3AP46098 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HTR3AP46098 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HTR3AP46098 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
HTR3AP46098 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HTR3AP46098 AC012676.1-201ENST00000574705 1949 ntBASIC21.72■■□□□ 1.07
HTR3AP46098 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.72■■□□□ 1.07
HTR3AP46098 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HTR3AP46098 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HTR3AP46098 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HTR3AP46098 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
HTR3AP46098 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.71■■□□□ 1.07
HTR3AP46098 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
HTR3AP46098 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HTR3AP46098 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HTR3AP46098 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
HTR3AP46098 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.71■■□□□ 1.07
HTR3AP46098 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HTR3AP46098 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
HTR3AP46098 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
HTR3AP46098 AC097639.1-201ENST00000565519 1891 ntBASIC21.71■■□□□ 1.07
HTR3AP46098 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.71■■□□□ 1.07
HTR3AP46098 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HTR3AP46098 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HTR3AP46098 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
HTR3AP46098 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.7■■□□□ 1.06
HTR3AP46098 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
HTR3AP46098 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HTR3AP46098 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
HTR3AP46098 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.7■■□□□ 1.06
HTR3AP46098 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HTR3AP46098 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.7■■□□□ 1.06
HTR3AP46098 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HTR3AP46098 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.7■■□□□ 1.06
HTR3AP46098 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.69■■□□□ 1.06
HTR3AP46098 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HTR3AP46098 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HTR3AP46098 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.69■■□□□ 1.06
HTR3AP46098 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HTR3AP46098 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HTR3AP46098 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms