Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 YLR198CYLR198C 360 nt7.33□□□□□ -1.24
MSH4P40965 YNL120CYNL120C 486 nt7.33□□□□□ -1.24
MSH4P40965 YOR169CYOR169C 465 nt7.33□□□□□ -1.24
MSH4P40965 PRM4YPL156C 855 nt7.33□□□□□ -1.24
MSH4P40965 TFB4YPR056W 1017 nt7.33□□□□□ -1.24
MSH4P40965 ALT2YDR111C 1524 nt7.32□□□□□ -1.24
MSH4P40965 RTG3YBL103C 1461 nt7.32□□□□□ -1.24
MSH4P40965 YPT1YFL038C 621 nt7.32□□□□□ -1.24
MSH4P40965 MDE1YJR024C 735 nt7.32□□□□□ -1.24
MSH4P40965 YJU2YKL095W 837 nt7.32□□□□□ -1.24
MSH4P40965 YKR075CYKR075C 924 nt7.32□□□□□ -1.24
MSH4P40965 FAR3YMR052W 615 nt7.32□□□□□ -1.24
MSH4P40965 YNL303WYNL303W 348 nt7.32□□□□□ -1.24
MSH4P40965 ODC2YOR222W 924 nt7.32□□□□□ -1.24
MSH4P40965 GTO3YMR251W 1101 nt7.31□□□□□ -1.24
MSH4P40965 GLC8YMR311C 690 nt7.31□□□□□ -1.24
MSH4P40965 KTR5YNL029C 1569 nt7.31□□□□□ -1.24
MSH4P40965 RCK1YGL158W 1539 nt7.31□□□□□ -1.24
MSH4P40965 WHI4YDL224C 1950 nt7.3□□□□□ -1.24
MSH4P40965 snR57snR57 88 nt7.3□□□□□ -1.24
MSH4P40965 FSH1YHR049W 732 nt7.3□□□□□ -1.24
MSH4P40965 OSW1YOR255W 837 nt7.3□□□□□ -1.24
MSH4P40965 GLE1YDL207W 1617 nt7.3□□□□□ -1.24
MSH4P40965 GPI18YBR004C 1302 nt7.29□□□□□ -1.24
MSH4P40965 GEF1YJR040W 2340 nt7.29□□□□□ -1.24
MSH4P40965 CRF1YDR223W 1404 nt7.29□□□□□ -1.24
MSH4P40965 SKI2YLR398C 3864 nt7.29□□□□□ -1.24
MSH4P40965 SIT4YDL047W 936 nt7.29□□□□□ -1.24
MSH4P40965 YDL218WYDL218W 954 nt7.29□□□□□ -1.24
MSH4P40965 TRP4YDR354W 1143 nt7.29□□□□□ -1.24
MSH4P40965 YGR291CYGR291C 222 nt7.29□□□□□ -1.24
MSH4P40965 YKR032WYKR032W 315 nt7.29□□□□□ -1.24
MSH4P40965 SEN34YAR008W 828 nt7.29□□□□□ -1.24
MSH4P40965 RSF1YMR030W 1131 nt7.29□□□□□ -1.24
MSH4P40965 YNL228WYNL228W 777 nt7.29□□□□□ -1.24
MSH4P40965 ENV7YPL236C 1095 nt7.29□□□□□ -1.24
MSH4P40965 snR189snR189 189 nt7.29□□□□□ -1.24
MSH4P40965 YBR298C-AYBR298C-A 222 nt7.29□□□□□ -1.24
MSH4P40965 LDB16YCL005W 771 nt7.29□□□□□ -1.24
MSH4P40965 CSC1YLR241W 2349 nt7.28□□□□□ -1.24
MSH4P40965 RSA4YCR072C 1548 nt7.28□□□□□ -1.24
MSH4P40965 RAD59YDL059C 717 nt7.28□□□□□ -1.24
MSH4P40965 PCL1YNL289W 840 nt7.28□□□□□ -1.24
MSH4P40965 HEM15YOR176W 1182 nt7.28□□□□□ -1.24
MSH4P40965 MSY1YPL097W 1479 nt7.28□□□□□ -1.24
MSH4P40965 RPN5YDL147W 1338 nt7.27□□□□□ -1.24
MSH4P40965 YDR015CYDR015C 240 nt7.27□□□□□ -1.25
MSH4P40965 HAT2YEL056W 1206 nt7.27□□□□□ -1.25
MSH4P40965 YGR066CYGR066C 879 nt7.27□□□□□ -1.25
MSH4P40965 DOT5YIL010W 648 nt7.27□□□□□ -1.25
MSH4P40965 FBA1YKL060C 1080 nt7.27□□□□□ -1.25
MSH4P40965 COX5AYNL052W 462 nt7.27□□□□□ -1.25
MSH4P40965 YBL070CYBL070C 321 nt7.27□□□□□ -1.25
MSH4P40965 YOL038C-AYOL038C-A 96 nt7.27□□□□□ -1.25
MSH4P40965 RER1YCL001W 567 nt7.27□□□□□ -1.25
MSH4P40965 GPA2YER020W 1350 nt7.27□□□□□ -1.25
MSH4P40965 NHA1YLR138W 2958 nt7.27□□□□□ -1.25
MSH4P40965 RGD1YBR260C 2001 nt7.27□□□□□ -1.25
MSH4P40965 YDL085C-AYDL085C-A 207 nt7.26□□□□□ -1.25
MSH4P40965 MRPS8YMR158W 468 nt7.26□□□□□ -1.25
MSH4P40965 PHA2YNL316C 1005 nt7.26□□□□□ -1.25
MSH4P40965 ECM31YBR176W 939 nt7.26□□□□□ -1.25
MSH4P40965 NOP7YGR103W 1818 nt7.26□□□□□ -1.25
MSH4P40965 MUM3YOR298W 1440 nt7.26□□□□□ -1.25
MSH4P40965 RMD5YDR255C 1266 nt7.25□□□□□ -1.25
MSH4P40965 BUD16YEL029C 939 nt7.25□□□□□ -1.25
MSH4P40965 ADK2YER170W 678 nt7.25□□□□□ -1.25
MSH4P40965 BUD32YGR262C 786 nt7.25□□□□□ -1.25
MSH4P40965 SQT1YIR012W 1296 nt7.25□□□□□ -1.25
MSH4P40965 CSI1YMR025W 888 nt7.25□□□□□ -1.25
MSH4P40965 ATG7YHR171W 1893 nt7.25□□□□□ -1.25
MSH4P40965 SES1YDR023W 1389 nt7.24□□□□□ -1.25
MSH4P40965 BNA5YLR231C 1362 nt7.24□□□□□ -1.25
MSH4P40965 PMT3YOR321W 2262 nt7.24□□□□□ -1.25
MSH4P40965 RAM1YDL090C 1296 nt7.24□□□□□ -1.25
MSH4P40965 YEA6YEL006W 1008 nt7.24□□□□□ -1.25
MSH4P40965 RFA2YNL312W 822 nt7.24□□□□□ -1.25
MSH4P40965 YOL024WYOL024W 519 nt7.24□□□□□ -1.25
MSH4P40965 RDL1YOR285W 420 nt7.24□□□□□ -1.25
MSH4P40965 YDL144CYDL144C 1071 nt7.23□□□□□ -1.25
MSH4P40965 RTN1YDR233C 888 nt7.23□□□□□ -1.25
MSH4P40965 MEH1YKR007W 555 nt7.23□□□□□ -1.25
MSH4P40965 SSP2YOR242C 1116 nt7.23□□□□□ -1.25
MSH4P40965 PTR2YKR093W 1806 nt7.22□□□□□ -1.25
MSH4P40965 THI2YBR240C 1353 nt7.22□□□□□ -1.25
MSH4P40965 YDL129WYDL129W 876 nt7.22□□□□□ -1.25
MSH4P40965 NCS6YGL211W 1080 nt7.22□□□□□ -1.25
MSH4P40965 OAC1YKL120W 975 nt7.22□□□□□ -1.25
MSH4P40965 YLR285C-AYLR285C-A 171 nt7.22□□□□□ -1.25
MSH4P40965 YLR312CYLR312C 1197 nt7.22□□□□□ -1.25
MSH4P40965 ERV41YML067C 1059 nt7.22□□□□□ -1.25
MSH4P40965 ALG5YPL227C 1005 nt7.22□□□□□ -1.25
MSH4P40965 SUT2YPR009W 807 nt7.22□□□□□ -1.25
MSH4P40965 RPO26YPR187W 468 nt7.22□□□□□ -1.25
MSH4P40965 RMD9YGL107C 1941 nt7.22□□□□□ -1.25
MSH4P40965 HER2YMR293C 1395 nt7.21□□□□□ -1.25
MSH4P40965 RIX7YLL034C 2514 nt7.21□□□□□ -1.26
MSH4P40965 YCR006CYCR006C 474 nt7.21□□□□□ -1.26
MSH4P40965 SUF5tG(CCC)O 72 nt7.21□□□□□ -1.26
MSH4P40965 EGD2YHR193C 525 nt7.21□□□□□ -1.26
Retrieved 100 of 7,029 protein–RNA pairs in 11.3 ms