Protein–RNA interactions for Protein: P0CX61

TY2A-F, Transposon Ty2-F Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-FP0CX61 YNL285WYNL285W 372 nt5.81□□□□□ -1.48
TY2A-FP0CX61 ICL1YER065C 1674 nt5.81□□□□□ -1.48
TY2A-FP0CX61 YLL067CYLL067C 3618 nt5.81□□□□□ -1.48
TY2A-FP0CX61 MKC7YDR144C 1791 nt5.8□□□□□ -1.48
TY2A-FP0CX61 VMS1YDR049W 1899 nt5.8□□□□□ -1.48
TY2A-FP0CX61 WHI2YOR043W 1461 nt5.8□□□□□ -1.48
TY2A-FP0CX61 YDR278CYDR278C 318 nt5.8□□□□□ -1.48
TY2A-FP0CX61 PCL6YER059W 1263 nt5.8□□□□□ -1.48
TY2A-FP0CX61 TSA1YML028W 591 nt5.8□□□□□ -1.48
TY2A-FP0CX61 YMR119W-AYMR119W-A 375 nt5.8□□□□□ -1.48
TY2A-FP0CX61 MTF1YMR228W 1026 nt5.8□□□□□ -1.48
TY2A-FP0CX61 DDC1YPL194W 1839 nt5.8□□□□□ -1.48
TY2A-FP0CX61 GIT1YCR098C 1557 nt5.8□□□□□ -1.48
TY2A-FP0CX61 GPI11YDR302W 660 nt5.79□□□□□ -1.48
TY2A-FP0CX61 BCY1YIL033C 1251 nt5.79□□□□□ -1.48
TY2A-FP0CX61 PML1YLR016C 615 nt5.79□□□□□ -1.48
TY2A-FP0CX61 MRPS16YPL013C 366 nt5.79□□□□□ -1.48
TY2A-FP0CX61 SVF1YDR346C 1446 nt5.79□□□□□ -1.48
TY2A-FP0CX61 SRV2YNL138W 1581 nt5.79□□□□□ -1.48
TY2A-FP0CX61 UTP4YDR324C 2331 nt5.79□□□□□ -1.48
TY2A-FP0CX61 AVO1YOL078W 3531 nt5.78□□□□□ -1.48
TY2A-FP0CX61 GUD1YDL238C 1470 nt5.78□□□□□ -1.48
TY2A-FP0CX61 YDR034W-BYDR034W-B 156 nt5.78□□□□□ -1.48
TY2A-FP0CX61 QRI5YLR204W 336 nt5.78□□□□□ -1.48
TY2A-FP0CX61 YNR068CYNR068C 819 nt5.78□□□□□ -1.48
TY2A-FP0CX61 HXT17YNR072W 1695 nt5.78□□□□□ -1.48
TY2A-FP0CX61 GPB2YAL056W 2643 nt5.78□□□□□ -1.48
TY2A-FP0CX61 UTP6YDR449C 1323 nt5.77□□□□□ -1.49
TY2A-FP0CX61 PCL10YGL134W 1302 nt5.77□□□□□ -1.49
TY2A-FP0CX61 HST3YOR025W 1344 nt5.77□□□□□ -1.49
TY2A-FP0CX61 RPT3YDR394W 1287 nt5.77□□□□□ -1.49
TY2A-FP0CX61 YEL068CYEL068C 333 nt5.77□□□□□ -1.49
TY2A-FP0CX61 BUR6YER159C 429 nt5.77□□□□□ -1.49
TY2A-FP0CX61 LYS12YIL094C 1116 nt5.77□□□□□ -1.49
TY2A-FP0CX61 AIM41YOR215C 558 nt5.77□□□□□ -1.49
TY2A-FP0CX61 PYC2YBR218C 3543 nt5.77□□□□□ -1.49
TY2A-FP0CX61 CLD1YGR110W 1338 nt5.76□□□□□ -1.49
TY2A-FP0CX61 YUR1YJL139C 1287 nt5.76□□□□□ -1.49
TY2A-FP0CX61 TAF4YMR005W 1167 nt5.76□□□□□ -1.49
TY2A-FP0CX61 AVT4YNL101W 2142 nt5.76□□□□□ -1.49
TY2A-FP0CX61 DAP1YPL170W 459 nt5.76□□□□□ -1.49
TY2A-FP0CX61 YDR387CYDR387C 1668 nt5.75□□□□□ -1.49
TY2A-FP0CX61 MDM31YHR194W 1740 nt5.75□□□□□ -1.49
TY2A-FP0CX61 AAD6YFL056C 639 nt5.75□□□□□ -1.49
TY2A-FP0CX61 DOT5YIL010W 648 nt5.75□□□□□ -1.49
TY2A-FP0CX61 PRE3YJL001W 648 nt5.75□□□□□ -1.49
TY2A-FP0CX61 RPS5YJR123W 678 nt5.75□□□□□ -1.49
TY2A-FP0CX61 HAP3YBL021C 435 nt5.75□□□□□ -1.49
TY2A-FP0CX61 JNM1YMR294W 1122 nt5.75□□□□□ -1.49
TY2A-FP0CX61 MRPS12YNR036C 462 nt5.75□□□□□ -1.49
TY2A-FP0CX61 YPR114WYPR114W 948 nt5.75□□□□□ -1.49
TY2A-FP0CX61 RKM4YDR257C 1485 nt5.75□□□□□ -1.49
TY2A-FP0CX61 CEF1YMR213W 1773 nt5.75□□□□□ -1.49
TY2A-FP0CX61 TEP1YNL128W 1305 nt5.74□□□□□ -1.49
TY2A-FP0CX61 SPO77YLR341W 1434 nt5.74□□□□□ -1.49
TY2A-FP0CX61 URA7YBL039C 1740 nt5.74□□□□□ -1.49
TY2A-FP0CX61 MAD2YJL030W 591 nt5.74□□□□□ -1.49
TY2A-FP0CX61 GLN1YPR035W 1113 nt5.74□□□□□ -1.49
TY2A-FP0CX61 MOG1YJR074W 657 nt5.73□□□□□ -1.49
TY2A-FP0CX61 YOL163WYOL163W 510 nt5.73□□□□□ -1.49
TY2A-FP0CX61 RPS28AYOR167C 204 nt5.73□□□□□ -1.49
TY2A-FP0CX61 ASN1YPR145W 1719 nt5.73□□□□□ -1.49
TY2A-FP0CX61 HXT2YMR011W 1626 nt5.73□□□□□ -1.49
TY2A-FP0CX61 KKQ8YKL168C 2175 nt5.73□□□□□ -1.49
TY2A-FP0CX61 ISC1YER019W 1434 nt5.73□□□□□ -1.49
TY2A-FP0CX61 YLH47YPR125W 1365 nt5.72□□□□□ -1.49
TY2A-FP0CX61 UTP9YHR196W 1728 nt5.72□□□□□ -1.49
TY2A-FP0CX61 PGK1YCR012W 1251 nt5.72□□□□□ -1.49
TY2A-FP0CX61 YDL129WYDL129W 876 nt5.72□□□□□ -1.49
TY2A-FP0CX61 SOH1YGL127C 384 nt5.72□□□□□ -1.49
TY2A-FP0CX61 RAI1YGL246C 1164 nt5.72□□□□□ -1.49
TY2A-FP0CX61 BUD32YGR262C 786 nt5.72□□□□□ -1.49
TY2A-FP0CX61 tR(ACG)DtR(ACG)D 73 nt5.72□□□□□ -1.49
TY2A-FP0CX61 tR(ACG)EtR(ACG)E 73 nt5.72□□□□□ -1.49
TY2A-FP0CX61 tR(ACG)KtR(ACG)K 73 nt5.72□□□□□ -1.49
TY2A-FP0CX61 tR(ACG)LtR(ACG)L 73 nt5.72□□□□□ -1.49
TY2A-FP0CX61 tR(ACG)OtR(ACG)O 73 nt5.72□□□□□ -1.49
TY2A-FP0CX61 SNN1YNL086W 309 nt5.72□□□□□ -1.49
TY2A-FP0CX61 YOL035CYOL035C 303 nt5.72□□□□□ -1.49
TY2A-FP0CX61 IFA38YBR159W 1044 nt5.72□□□□□ -1.49
TY2A-FP0CX61 VRP1YLR337C 2454 nt5.72□□□□□ -1.49
TY2A-FP0CX61 SKS1YPL026C 1509 nt5.71□□□□□ -1.5
TY2A-FP0CX61 YKR075CYKR075C 924 nt5.71□□□□□ -1.5
TY2A-FP0CX61 YMR135W-AYMR135W-A 534 nt5.71□□□□□ -1.5
TY2A-FP0CX61 YNL042W-BYNL042W-B 258 nt5.71□□□□□ -1.5
TY2A-FP0CX61 YPR160C-AYPR160C-A 285 nt5.71□□□□□ -1.5
TY2A-FP0CX61 IMG2YCR071C 441 nt5.7□□□□□ -1.5
TY2A-FP0CX61 YHR095WYHR095W 495 nt5.7□□□□□ -1.5
TY2A-FP0CX61 YML083CYML083C 1257 nt5.7□□□□□ -1.5
TY2A-FP0CX61 CIN4YMR138W 576 nt5.7□□□□□ -1.5
TY2A-FP0CX61 OSW5YMR148W 447 nt5.7□□□□□ -1.5
TY2A-FP0CX61 ATG4YNL223W 1485 nt5.7□□□□□ -1.5
TY2A-FP0CX61 TPO3YPR156C 1869 nt5.69□□□□□ -1.5
TY2A-FP0CX61 YHL017WYHL017W 1599 nt5.69□□□□□ -1.5
TY2A-FP0CX61 SPG1YGR236C 288 nt5.69□□□□□ -1.5
TY2A-FP0CX61 YIR018C-AYIR018C-A 138 nt5.69□□□□□ -1.5
TY2A-FP0CX61 YPR123CYPR123C 435 nt5.69□□□□□ -1.5
TY2A-FP0CX61 PEX32YBR168W 1242 nt5.69□□□□□ -1.5
TY2A-FP0CX61 MNN5YJL186W 1761 nt5.69□□□□□ -1.5
TY2A-FP0CX61 RAD24YER173W 1980 nt5.69□□□□□ -1.5
Retrieved 100 of 7,029 protein–RNA pairs in 43.2 ms