Protein–RNA interactions for Protein: P04155

TFF1, Trefoil factor 1, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1P04155 AC018755.3-202ENST00000596210 929 ntBASIC19.94■□□□□ 0.78
TFF1P04155 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.94■□□□□ 0.78
TFF1P04155 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.94■□□□□ 0.78
TFF1P04155 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TFF1P04155 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.94■□□□□ 0.78
TFF1P04155 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TFF1P04155 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.93■□□□□ 0.78
TFF1P04155 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TFF1P04155 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TFF1P04155 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TFF1P04155 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TFF1P04155 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TFF1P04155 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.93■□□□□ 0.78
TFF1P04155 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
TFF1P04155 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.93■□□□□ 0.78
TFF1P04155 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TFF1P04155 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TFF1P04155 MIR6765-201ENST00000614092 87 ntBASIC19.92■□□□□ 0.78
TFF1P04155 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
TFF1P04155 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TFF1P04155 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.92■□□□□ 0.78
TFF1P04155 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TFF1P04155 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TFF1P04155 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TFF1P04155 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TFF1P04155 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TFF1P04155 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.91■□□□□ 0.78
TFF1P04155 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TFF1P04155 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TFF1P04155 AL033527.3-201ENST00000566366 1196 ntBASIC19.91■□□□□ 0.78
TFF1P04155 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.91■□□□□ 0.78
TFF1P04155 SLC6A10P-202ENST00000431994 2058 ntBASIC19.91■□□□□ 0.78
TFF1P04155 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TFF1P04155 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TFF1P04155 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.9■□□□□ 0.78
TFF1P04155 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TFF1P04155 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TFF1P04155 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TFF1P04155 ATP5G2P3-201ENST00000429083 425 ntBASIC19.9■□□□□ 0.78
TFF1P04155 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TFF1P04155 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.9■□□□□ 0.78
TFF1P04155 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
TFF1P04155 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.9■□□□□ 0.78
TFF1P04155 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TFF1P04155 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TFF1P04155 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TFF1P04155 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TFF1P04155 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TFF1P04155 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TFF1P04155 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TFF1P04155 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TFF1P04155 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TFF1P04155 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TFF1P04155 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.89■□□□□ 0.77
TFF1P04155 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.89■□□□□ 0.77
TFF1P04155 AC022211.4-201ENST00000625094 2161 ntBASIC19.89■□□□□ 0.77
TFF1P04155 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TFF1P04155 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TFF1P04155 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TFF1P04155 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TFF1P04155 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
TFF1P04155 RPS2P7-201ENST00000447334 885 ntBASIC19.88■□□□□ 0.77
TFF1P04155 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TFF1P04155 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TFF1P04155 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TFF1P04155 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TFF1P04155 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TFF1P04155 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TFF1P04155 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
TFF1P04155 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TFF1P04155 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TFF1P04155 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TFF1P04155 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TFF1P04155 AC135731.1-201ENST00000569415 2548 ntBASIC19.87■□□□□ 0.77
TFF1P04155 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TFF1P04155 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TFF1P04155 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TFF1P04155 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TFF1P04155 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.86■□□□□ 0.77
TFF1P04155 AC138932.3-201ENST00000567634 1902 ntBASIC19.86■□□□□ 0.77
TFF1P04155 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TFF1P04155 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TFF1P04155 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TFF1P04155 AC012354.3-201ENST00000623734 483 ntBASIC19.86■□□□□ 0.77
TFF1P04155 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TFF1P04155 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TFF1P04155 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
TFF1P04155 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TFF1P04155 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TFF1P04155 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TFF1P04155 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TFF1P04155 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TFF1P04155 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.85■□□□□ 0.77
TFF1P04155 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TFF1P04155 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.85■□□□□ 0.77
TFF1P04155 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TFF1P04155 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TFF1P04155 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TFF1P04155 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TFF1P04155 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms