Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19■□□□□ 0.63
TCRBV4S1A1TA0A5B7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV4S1A1TA0A5B7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV4S1A1TA0A5B7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV4S1A1TA0A5B7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV4S1A1TA0A5B7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.99■□□□□ 0.63
TCRBV4S1A1TA0A5B7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.99■□□□□ 0.63
TCRBV4S1A1TA0A5B7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV4S1A1TA0A5B7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV4S1A1TA0A5B7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV4S1A1TA0A5B7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.98■□□□□ 0.63
TCRBV4S1A1TA0A5B7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV4S1A1TA0A5B7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TCRBV4S1A1TA0A5B7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.98■□□□□ 0.63
TCRBV4S1A1TA0A5B7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TCRBV4S1A1TA0A5B7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.98■□□□□ 0.63
TCRBV4S1A1TA0A5B7 AC010980.1-201ENST00000587192 1142 ntBASIC18.98■□□□□ 0.63
TCRBV4S1A1TA0A5B7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TCRBV4S1A1TA0A5B7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.98■□□□□ 0.63
TCRBV4S1A1TA0A5B7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.98■□□□□ 0.63
TCRBV4S1A1TA0A5B7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV4S1A1TA0A5B7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV4S1A1TA0A5B7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.97■□□□□ 0.63
TCRBV4S1A1TA0A5B7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.97■□□□□ 0.63
TCRBV4S1A1TA0A5B7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TCRBV4S1A1TA0A5B7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV4S1A1TA0A5B7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV4S1A1TA0A5B7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV4S1A1TA0A5B7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
TCRBV4S1A1TA0A5B7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV4S1A1TA0A5B7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV4S1A1TA0A5B7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV4S1A1TA0A5B7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV4S1A1TA0A5B7 AC142381.3-201ENST00000568208 1670 ntBASIC18.96■□□□□ 0.63
TCRBV4S1A1TA0A5B7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.96■□□□□ 0.63
TCRBV4S1A1TA0A5B7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV4S1A1TA0A5B7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
TCRBV4S1A1TA0A5B7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV4S1A1TA0A5B7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV4S1A1TA0A5B7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV4S1A1TA0A5B7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV4S1A1TA0A5B7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
TCRBV4S1A1TA0A5B7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV4S1A1TA0A5B7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV4S1A1TA0A5B7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV4S1A1TA0A5B7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV4S1A1TA0A5B7 KRT8P33-201ENST00000508125 1423 ntBASIC18.94■□□□□ 0.62
TCRBV4S1A1TA0A5B7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV4S1A1TA0A5B7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV4S1A1TA0A5B7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV4S1A1TA0A5B7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.94■□□□□ 0.62
TCRBV4S1A1TA0A5B7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV4S1A1TA0A5B7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV4S1A1TA0A5B7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.94■□□□□ 0.62
TCRBV4S1A1TA0A5B7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV4S1A1TA0A5B7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TCRBV4S1A1TA0A5B7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV4S1A1TA0A5B7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.93■□□□□ 0.62
TCRBV4S1A1TA0A5B7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV4S1A1TA0A5B7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.93■□□□□ 0.62
TCRBV4S1A1TA0A5B7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV4S1A1TA0A5B7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.93■□□□□ 0.62
TCRBV4S1A1TA0A5B7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.93■□□□□ 0.62
TCRBV4S1A1TA0A5B7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV4S1A1TA0A5B7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV4S1A1TA0A5B7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.92■□□□□ 0.62
TCRBV4S1A1TA0A5B7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
TCRBV4S1A1TA0A5B7 YBX1P4-201ENST00000392794 808 ntBASIC18.92■□□□□ 0.62
TCRBV4S1A1TA0A5B7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.92■□□□□ 0.62
TCRBV4S1A1TA0A5B7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.92■□□□□ 0.62
TCRBV4S1A1TA0A5B7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.92■□□□□ 0.62
TCRBV4S1A1TA0A5B7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.91■□□□□ 0.62
TCRBV4S1A1TA0A5B7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TCRBV4S1A1TA0A5B7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV4S1A1TA0A5B7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV4S1A1TA0A5B7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV4S1A1TA0A5B7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.91■□□□□ 0.62
TCRBV4S1A1TA0A5B7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV4S1A1TA0A5B7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV4S1A1TA0A5B7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV4S1A1TA0A5B7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.91■□□□□ 0.62
TCRBV4S1A1TA0A5B7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TCRBV4S1A1TA0A5B7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
TCRBV4S1A1TA0A5B7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.9■□□□□ 0.62
TCRBV4S1A1TA0A5B7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV4S1A1TA0A5B7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TCRBV4S1A1TA0A5B7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV4S1A1TA0A5B7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV4S1A1TA0A5B7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
TCRBV4S1A1TA0A5B7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TCRBV4S1A1TA0A5B7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TCRBV4S1A1TA0A5B7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV4S1A1TA0A5B7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.89■□□□□ 0.61
TCRBV4S1A1TA0A5B7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV4S1A1TA0A5B7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.89■□□□□ 0.61
TCRBV4S1A1TA0A5B7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV4S1A1TA0A5B7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.89■□□□□ 0.61
TCRBV4S1A1TA0A5B7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV4S1A1TA0A5B7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV4S1A1TA0A5B7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms