Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDH18Q9HCL0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PCDH18Q9HCL0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
PCDH18Q9HCL0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PCDH18Q9HCL0 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC24.78■■□□□ 1.56
PCDH18Q9HCL0 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC24.78■■□□□ 1.56
PCDH18Q9HCL0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDH18Q9HCL0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDH18Q9HCL0 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDH18Q9HCL0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDH18Q9HCL0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDH18Q9HCL0 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
PCDH18Q9HCL0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDH18Q9HCL0 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDH18Q9HCL0 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
PCDH18Q9HCL0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.77■■□□□ 1.56
PCDH18Q9HCL0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.77■■□□□ 1.56
PCDH18Q9HCL0 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC24.76■■□□□ 1.55
PCDH18Q9HCL0 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC24.76■■□□□ 1.55
PCDH18Q9HCL0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.76■■□□□ 1.55
PCDH18Q9HCL0 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.76■■□□□ 1.55
PCDH18Q9HCL0 AC133552.2-201ENST00000619106 1032 ntBASIC24.76■■□□□ 1.55
PCDH18Q9HCL0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.76■■□□□ 1.55
PCDH18Q9HCL0 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH18Q9HCL0 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH18Q9HCL0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH18Q9HCL0 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH18Q9HCL0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH18Q9HCL0 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.75■■□□□ 1.55
PCDH18Q9HCL0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
PCDH18Q9HCL0 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH18Q9HCL0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH18Q9HCL0 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH18Q9HCL0 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
PCDH18Q9HCL0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH18Q9HCL0 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH18Q9HCL0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH18Q9HCL0 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDH18Q9HCL0 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDH18Q9HCL0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.72■■□□□ 1.55
PCDH18Q9HCL0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
PCDH18Q9HCL0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
PCDH18Q9HCL0 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH18Q9HCL0 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH18Q9HCL0 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH18Q9HCL0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.72■■□□□ 1.55
PCDH18Q9HCL0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH18Q9HCL0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH18Q9HCL0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH18Q9HCL0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDH18Q9HCL0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.71■■□□□ 1.55
PCDH18Q9HCL0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDH18Q9HCL0 AC022211.4-201ENST00000625094 2161 ntBASIC24.71■■□□□ 1.55
PCDH18Q9HCL0 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
PCDH18Q9HCL0 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
PCDH18Q9HCL0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.7■■□□□ 1.55
PCDH18Q9HCL0 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDH18Q9HCL0 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDH18Q9HCL0 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PCDH18Q9HCL0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.7■■□□□ 1.54
PCDH18Q9HCL0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PCDH18Q9HCL0 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
PCDH18Q9HCL0 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDH18Q9HCL0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCDH18Q9HCL0 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCDH18Q9HCL0 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDH18Q9HCL0 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDH18Q9HCL0 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDH18Q9HCL0 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDH18Q9HCL0 BRD4-212ENST00000630599 726 ntTSL 2 BASIC24.68■■□□□ 1.54
PCDH18Q9HCL0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDH18Q9HCL0 AC142381.3-201ENST00000568208 1670 ntBASIC24.68■■□□□ 1.54
PCDH18Q9HCL0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.68■■□□□ 1.54
PCDH18Q9HCL0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.67■■□□□ 1.54
PCDH18Q9HCL0 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDH18Q9HCL0 SLC6A10P-202ENST00000431994 2058 ntBASIC24.67■■□□□ 1.54
PCDH18Q9HCL0 AL592293.1-201ENST00000502889 1188 ntBASIC24.67■■□□□ 1.54
PCDH18Q9HCL0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDH18Q9HCL0 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.67■■□□□ 1.54
PCDH18Q9HCL0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH18Q9HCL0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC24.66■■□□□ 1.54
PCDH18Q9HCL0 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH18Q9HCL0 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.66■■□□□ 1.54
PCDH18Q9HCL0 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDH18Q9HCL0 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC24.65■■□□□ 1.54
PCDH18Q9HCL0 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.65■■□□□ 1.54
PCDH18Q9HCL0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDH18Q9HCL0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDH18Q9HCL0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDH18Q9HCL0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.64■■□□□ 1.54
PCDH18Q9HCL0 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
PCDH18Q9HCL0 U85056.1-201ENST00000616429 682 ntBASIC24.64■■□□□ 1.54
PCDH18Q9HCL0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
PCDH18Q9HCL0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PCDH18Q9HCL0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
PCDH18Q9HCL0 AC138932.3-201ENST00000567634 1902 ntBASIC24.63■■□□□ 1.53
PCDH18Q9HCL0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDH18Q9HCL0 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
PCDH18Q9HCL0 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
PCDH18Q9HCL0 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms