Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
ZNF428Q96B54 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC30.88■■■□□ 2.53
ZNF428Q96B54 MIR6765-201ENST00000614092 87 ntBASIC30.88■■■□□ 2.53
ZNF428Q96B54 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
ZNF428Q96B54 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
ZNF428Q96B54 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
ZNF428Q96B54 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
ZNF428Q96B54 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
ZNF428Q96B54 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
ZNF428Q96B54 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC30.87■■■□□ 2.53
ZNF428Q96B54 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
ZNF428Q96B54 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
ZNF428Q96B54 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC30.86■■■□□ 2.53
ZNF428Q96B54 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC30.86■■■□□ 2.53
ZNF428Q96B54 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
ZNF428Q96B54 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
ZNF428Q96B54 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
ZNF428Q96B54 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC30.84■■■□□ 2.53
ZNF428Q96B54 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC30.84■■■□□ 2.53
ZNF428Q96B54 AL451085.2-201ENST00000605085 799 ntBASIC30.84■■■□□ 2.53
ZNF428Q96B54 SNAI3-AS1-204ENST00000567997 2048 ntBASIC30.84■■■□□ 2.53
ZNF428Q96B54 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.53
ZNF428Q96B54 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
ZNF428Q96B54 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC30.83■■■□□ 2.53
ZNF428Q96B54 AC139795.1-202ENST00000500444 432 ntBASIC30.83■■■□□ 2.53
ZNF428Q96B54 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
ZNF428Q96B54 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
ZNF428Q96B54 AC018755.3-202ENST00000596210 929 ntBASIC30.82■■■□□ 2.52
ZNF428Q96B54 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC30.82■■■□□ 2.52
ZNF428Q96B54 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC30.82■■■□□ 2.52
ZNF428Q96B54 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
ZNF428Q96B54 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
ZNF428Q96B54 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC30.81■■■□□ 2.52
ZNF428Q96B54 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC30.81■■■□□ 2.52
ZNF428Q96B54 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.52
ZNF428Q96B54 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC30.81■■■□□ 2.52
ZNF428Q96B54 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC30.81■■■□□ 2.52
ZNF428Q96B54 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
ZNF428Q96B54 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
ZNF428Q96B54 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
ZNF428Q96B54 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
ZNF428Q96B54 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC30.79■■■□□ 2.52
ZNF428Q96B54 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
ZNF428Q96B54 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
ZNF428Q96B54 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC30.79■■■□□ 2.52
ZNF428Q96B54 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
ZNF428Q96B54 AC103834.1-201ENST00000520383 144 ntBASIC30.79■■■□□ 2.52
ZNF428Q96B54 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC30.79■■■□□ 2.52
ZNF428Q96B54 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
ZNF428Q96B54 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC30.78■■■□□ 2.52
ZNF428Q96B54 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
ZNF428Q96B54 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC30.78■■■□□ 2.52
ZNF428Q96B54 AC097639.1-201ENST00000565519 1891 ntBASIC30.78■■■□□ 2.52
ZNF428Q96B54 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
ZNF428Q96B54 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
ZNF428Q96B54 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
ZNF428Q96B54 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC30.77■■■□□ 2.52
ZNF428Q96B54 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
ZNF428Q96B54 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
ZNF428Q96B54 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC30.77■■■□□ 2.52
ZNF428Q96B54 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC30.76■■■□□ 2.52
ZNF428Q96B54 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
ZNF428Q96B54 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.51
ZNF428Q96B54 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC30.76■■■□□ 2.51
ZNF428Q96B54 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC30.76■■■□□ 2.51
ZNF428Q96B54 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
ZNF428Q96B54 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC30.75■■■□□ 2.51
ZNF428Q96B54 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
ZNF428Q96B54 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
ZNF428Q96B54 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
ZNF428Q96B54 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC30.75■■■□□ 2.51
ZNF428Q96B54 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
ZNF428Q96B54 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
ZNF428Q96B54 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC30.75■■■□□ 2.51
ZNF428Q96B54 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
ZNF428Q96B54 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC30.74■■■□□ 2.51
ZNF428Q96B54 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC30.74■■■□□ 2.51
ZNF428Q96B54 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC30.74■■■□□ 2.51
ZNF428Q96B54 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
ZNF428Q96B54 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
ZNF428Q96B54 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
ZNF428Q96B54 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
ZNF428Q96B54 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
ZNF428Q96B54 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC30.73■■■□□ 2.51
ZNF428Q96B54 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC30.73■■■□□ 2.51
ZNF428Q96B54 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
ZNF428Q96B54 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
ZNF428Q96B54 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC30.72■■■□□ 2.51
ZNF428Q96B54 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC30.72■■■□□ 2.51
ZNF428Q96B54 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
ZNF428Q96B54 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
ZNF428Q96B54 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
ZNF428Q96B54 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
ZNF428Q96B54 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
ZNF428Q96B54 IDNK-203ENST00000405990 629 ntTSL 2 BASIC30.71■■■□□ 2.51
ZNF428Q96B54 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC30.71■■■□□ 2.51
ZNF428Q96B54 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
ZNF428Q96B54 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
ZNF428Q96B54 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC30.71■■■□□ 2.51
ZNF428Q96B54 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC30.7■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms