Protein–RNA interactions for Protein: P58499

FAM3B, Protein FAM3B, humanhuman

Predicted RBP Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3BP58499 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FAM3BP58499 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC18.39■□□□□ 0.53
FAM3BP58499 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
FAM3BP58499 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FAM3BP58499 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.39■□□□□ 0.53
FAM3BP58499 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FAM3BP58499 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FAM3BP58499 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FAM3BP58499 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FAM3BP58499 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.38■□□□□ 0.53
FAM3BP58499 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FAM3BP58499 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FAM3BP58499 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.38■□□□□ 0.53
FAM3BP58499 AC108673.1-201ENST00000510422 1159 ntBASIC18.38■□□□□ 0.53
FAM3BP58499 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
FAM3BP58499 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
FAM3BP58499 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FAM3BP58499 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
FAM3BP58499 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FAM3BP58499 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
FAM3BP58499 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18.38■□□□□ 0.53
FAM3BP58499 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
FAM3BP58499 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FAM3BP58499 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FAM3BP58499 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
FAM3BP58499 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FAM3BP58499 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.37■□□□□ 0.53
FAM3BP58499 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.37■□□□□ 0.53
FAM3BP58499 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FAM3BP58499 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FAM3BP58499 AC142472.1-201ENST00000612013 1741 ntBASIC18.37■□□□□ 0.53
FAM3BP58499 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FAM3BP58499 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.37■□□□□ 0.53
FAM3BP58499 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FAM3BP58499 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
FAM3BP58499 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
FAM3BP58499 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
FAM3BP58499 DUX4L29-201ENST00000425409 679 ntBASIC18.36■□□□□ 0.53
FAM3BP58499 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.36■□□□□ 0.53
FAM3BP58499 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.36■□□□□ 0.53
FAM3BP58499 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
FAM3BP58499 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
FAM3BP58499 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
FAM3BP58499 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
FAM3BP58499 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
FAM3BP58499 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.35■□□□□ 0.53
FAM3BP58499 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FAM3BP58499 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.35■□□□□ 0.53
FAM3BP58499 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
FAM3BP58499 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
FAM3BP58499 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
FAM3BP58499 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FAM3BP58499 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.35■□□□□ 0.53
FAM3BP58499 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
FAM3BP58499 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
FAM3BP58499 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FAM3BP58499 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
FAM3BP58499 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.34■□□□□ 0.53
FAM3BP58499 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.34■□□□□ 0.53
FAM3BP58499 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
FAM3BP58499 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FAM3BP58499 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
FAM3BP58499 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FAM3BP58499 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
FAM3BP58499 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.33■□□□□ 0.53
FAM3BP58499 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FAM3BP58499 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FAM3BP58499 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.33■□□□□ 0.52
FAM3BP58499 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FAM3BP58499 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.33■□□□□ 0.52
FAM3BP58499 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.33■□□□□ 0.52
FAM3BP58499 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FAM3BP58499 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.33■□□□□ 0.52
FAM3BP58499 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
FAM3BP58499 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FAM3BP58499 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
FAM3BP58499 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FAM3BP58499 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.32■□□□□ 0.52
FAM3BP58499 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
FAM3BP58499 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FAM3BP58499 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FAM3BP58499 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
FAM3BP58499 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FAM3BP58499 ZNRF2P2-203ENST00000454624 420 ntBASIC18.32■□□□□ 0.52
FAM3BP58499 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FAM3BP58499 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FAM3BP58499 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FAM3BP58499 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FAM3BP58499 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
FAM3BP58499 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FAM3BP58499 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC18.32■□□□□ 0.52
FAM3BP58499 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.31■□□□□ 0.52
FAM3BP58499 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
FAM3BP58499 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FAM3BP58499 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
FAM3BP58499 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
FAM3BP58499 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
FAM3BP58499 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.31■□□□□ 0.52
FAM3BP58499 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FAM3BP58499 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms