Protein–RNA interactions for Protein: Q9UHC7

MKRN1, E3 ubiquitin-protein ligase makorin-1, humanhuman

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1Q9UHC7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
MKRN1Q9UHC7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
MKRN1Q9UHC7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
MKRN1Q9UHC7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
MKRN1Q9UHC7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC29.4■■■□□ 2.3
MKRN1Q9UHC7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC29.39■■■□□ 2.3
MKRN1Q9UHC7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
MKRN1Q9UHC7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
MKRN1Q9UHC7 RARRES2P6-201ENST00000567333 442 ntBASIC29.39■■■□□ 2.3
MKRN1Q9UHC7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
MKRN1Q9UHC7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
MKRN1Q9UHC7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
MKRN1Q9UHC7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC29.39■■■□□ 2.3
MKRN1Q9UHC7 AL449106.1-201ENST00000608517 1980 ntBASIC29.39■■■□□ 2.29
MKRN1Q9UHC7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC29.38■■■□□ 2.29
MKRN1Q9UHC7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
MKRN1Q9UHC7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
MKRN1Q9UHC7 AC110285.6-201ENST00000617652 491 ntBASIC29.38■■■□□ 2.29
MKRN1Q9UHC7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
MKRN1Q9UHC7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC29.36■■■□□ 2.29
MKRN1Q9UHC7 AC131281.2-201ENST00000520478 145 ntBASIC29.36■■■□□ 2.29
MKRN1Q9UHC7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC29.36■■■□□ 2.29
MKRN1Q9UHC7 BX255925.1-201ENST00000566954 1854 ntBASIC29.36■■■□□ 2.29
MKRN1Q9UHC7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
MKRN1Q9UHC7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC29.35■■■□□ 2.29
MKRN1Q9UHC7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
MKRN1Q9UHC7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC29.35■■■□□ 2.29
MKRN1Q9UHC7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC29.35■■■□□ 2.29
MKRN1Q9UHC7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC29.35■■■□□ 2.29
MKRN1Q9UHC7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC29.35■■■□□ 2.29
MKRN1Q9UHC7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
MKRN1Q9UHC7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC29.34■■■□□ 2.29
MKRN1Q9UHC7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC29.34■■■□□ 2.29
MKRN1Q9UHC7 AC019171.1-201ENST00000601251 1056 ntBASIC29.34■■■□□ 2.29
MKRN1Q9UHC7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
MKRN1Q9UHC7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC29.34■■■□□ 2.29
MKRN1Q9UHC7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC29.34■■■□□ 2.29
MKRN1Q9UHC7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC29.34■■■□□ 2.29
MKRN1Q9UHC7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC29.33■■■□□ 2.29
MKRN1Q9UHC7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
MKRN1Q9UHC7 AL136116.3-201ENST00000402907 1138 ntBASIC29.33■■■□□ 2.29
MKRN1Q9UHC7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC29.33■■■□□ 2.29
MKRN1Q9UHC7 BX664725.1-201ENST00000438252 379 ntBASIC29.33■■■□□ 2.29
MKRN1Q9UHC7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
MKRN1Q9UHC7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
MKRN1Q9UHC7 AC142086.6-201ENST00000621154 1765 ntBASIC29.33■■■□□ 2.29
MKRN1Q9UHC7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC29.32■■■□□ 2.28
MKRN1Q9UHC7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
MKRN1Q9UHC7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
MKRN1Q9UHC7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
MKRN1Q9UHC7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
MKRN1Q9UHC7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
MKRN1Q9UHC7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
MKRN1Q9UHC7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
MKRN1Q9UHC7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC29.31■■■□□ 2.28
MKRN1Q9UHC7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
MKRN1Q9UHC7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC29.31■■■□□ 2.28
MKRN1Q9UHC7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC29.31■■■□□ 2.28
MKRN1Q9UHC7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC29.31■■■□□ 2.28
MKRN1Q9UHC7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC29.31■■■□□ 2.28
MKRN1Q9UHC7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC29.3■■■□□ 2.28
MKRN1Q9UHC7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
MKRN1Q9UHC7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
MKRN1Q9UHC7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC29.3■■■□□ 2.28
MKRN1Q9UHC7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC29.3■■■□□ 2.28
MKRN1Q9UHC7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC29.3■■■□□ 2.28
MKRN1Q9UHC7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC29.3■■■□□ 2.28
MKRN1Q9UHC7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC29.29■■■□□ 2.28
MKRN1Q9UHC7 AC104564.3-201ENST00000582367 638 ntBASIC29.29■■■□□ 2.28
MKRN1Q9UHC7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
MKRN1Q9UHC7 TSPY9P-201ENST00000440215 945 ntBASIC29.28■■■□□ 2.28
MKRN1Q9UHC7 TSPY11P-201ENST00000442607 1045 ntBASIC29.28■■■□□ 2.28
MKRN1Q9UHC7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
MKRN1Q9UHC7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
MKRN1Q9UHC7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
MKRN1Q9UHC7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC29.27■■■□□ 2.28
MKRN1Q9UHC7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
MKRN1Q9UHC7 SRR-208ENST00000576848 588 ntTSL 4 BASIC29.27■■■□□ 2.28
MKRN1Q9UHC7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
MKRN1Q9UHC7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC29.26■■■□□ 2.27
MKRN1Q9UHC7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC29.26■■■□□ 2.27
MKRN1Q9UHC7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC29.26■■■□□ 2.27
MKRN1Q9UHC7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC29.26■■■□□ 2.27
MKRN1Q9UHC7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
MKRN1Q9UHC7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC29.25■■■□□ 2.27
MKRN1Q9UHC7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC29.25■■■□□ 2.27
MKRN1Q9UHC7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
MKRN1Q9UHC7 ZNRF2P3-201ENST00000424200 374 ntBASIC29.24■■■□□ 2.27
MKRN1Q9UHC7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC29.24■■■□□ 2.27
MKRN1Q9UHC7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC29.24■■■□□ 2.27
MKRN1Q9UHC7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
MKRN1Q9UHC7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC29.23■■■□□ 2.27
MKRN1Q9UHC7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC29.23■■■□□ 2.27
MKRN1Q9UHC7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC29.23■■■□□ 2.27
MKRN1Q9UHC7 AC096631.2-201ENST00000436136 790 ntBASIC29.23■■■□□ 2.27
MKRN1Q9UHC7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC29.23■■■□□ 2.27
MKRN1Q9UHC7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC29.23■■■□□ 2.27
MKRN1Q9UHC7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
MKRN1Q9UHC7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
MKRN1Q9UHC7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC29.23■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 1305.8 ms