Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
ABCC4O15439 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC30.87■■■□□ 2.53
ABCC4O15439 CREM-210ENST00000374721 2020 ntTSL 5 BASIC30.86■■■□□ 2.53
ABCC4O15439 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
ABCC4O15439 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
ABCC4O15439 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC30.86■■■□□ 2.53
ABCC4O15439 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
ABCC4O15439 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
ABCC4O15439 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC30.85■■■□□ 2.53
ABCC4O15439 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC30.85■■■□□ 2.53
ABCC4O15439 AC010980.1-201ENST00000587192 1142 ntBASIC30.85■■■□□ 2.53
ABCC4O15439 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
ABCC4O15439 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
ABCC4O15439 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC30.84■■■□□ 2.53
ABCC4O15439 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC30.83■■■□□ 2.53
ABCC4O15439 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
ABCC4O15439 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC30.83■■■□□ 2.53
ABCC4O15439 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC30.83■■■□□ 2.53
ABCC4O15439 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.52
ABCC4O15439 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.52
ABCC4O15439 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
ABCC4O15439 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC30.81■■■□□ 2.52
ABCC4O15439 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC30.8■■■□□ 2.52
ABCC4O15439 DUSP8P4-201ENST00000399538 1761 ntBASIC30.8■■■□□ 2.52
ABCC4O15439 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
ABCC4O15439 BHLHE23-202ENST00000612929 1109 ntBASIC30.79■■■□□ 2.52
ABCC4O15439 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
ABCC4O15439 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
ABCC4O15439 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
ABCC4O15439 AC145676.1-201ENST00000514988 2004 ntBASIC30.78■■■□□ 2.52
ABCC4O15439 ERN1-208ENST00000606895 2068 ntBASIC30.78■■■□□ 2.52
ABCC4O15439 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
ABCC4O15439 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
ABCC4O15439 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
ABCC4O15439 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC30.77■■■□□ 2.52
ABCC4O15439 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC30.77■■■□□ 2.52
ABCC4O15439 KRT8P33-201ENST00000508125 1423 ntBASIC30.77■■■□□ 2.52
ABCC4O15439 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
ABCC4O15439 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
ABCC4O15439 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
ABCC4O15439 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC30.77■■■□□ 2.52
ABCC4O15439 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
ABCC4O15439 BEX3-202ENST00000372634 753 ntTSL 2 BASIC30.76■■■□□ 2.52
ABCC4O15439 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.52
ABCC4O15439 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC30.76■■■□□ 2.52
ABCC4O15439 MIR6765-201ENST00000614092 87 ntBASIC30.76■■■□□ 2.52
ABCC4O15439 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
ABCC4O15439 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
ABCC4O15439 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
ABCC4O15439 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC30.76■■■□□ 2.51
ABCC4O15439 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
ABCC4O15439 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC30.75■■■□□ 2.51
ABCC4O15439 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
ABCC4O15439 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC30.74■■■□□ 2.51
ABCC4O15439 TRIR-205ENST00000592273 783 ntTSL 3 BASIC30.74■■■□□ 2.51
ABCC4O15439 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
ABCC4O15439 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
ABCC4O15439 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
ABCC4O15439 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
ABCC4O15439 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC30.73■■■□□ 2.51
ABCC4O15439 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
ABCC4O15439 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC30.73■■■□□ 2.51
ABCC4O15439 AC010501.1-201ENST00000606270 1962 ntBASIC30.73■■■□□ 2.51
ABCC4O15439 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
ABCC4O15439 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
ABCC4O15439 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
ABCC4O15439 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
ABCC4O15439 AC074183.2-201ENST00000623112 922 ntBASIC30.73■■■□□ 2.51
ABCC4O15439 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
ABCC4O15439 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
ABCC4O15439 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
ABCC4O15439 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
ABCC4O15439 PVT1_1.1-201ENST00000615125 194 ntBASIC30.72■■■□□ 2.51
ABCC4O15439 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC30.71■■■□□ 2.51
ABCC4O15439 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC30.71■■■□□ 2.51
ABCC4O15439 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC30.71■■■□□ 2.51
ABCC4O15439 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
ABCC4O15439 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
ABCC4O15439 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC30.71■■■□□ 2.51
ABCC4O15439 AC139795.1-202ENST00000500444 432 ntBASIC30.71■■■□□ 2.51
ABCC4O15439 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
ABCC4O15439 AC103834.1-201ENST00000520383 144 ntBASIC30.7■■■□□ 2.5
ABCC4O15439 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC30.69■■■□□ 2.5
ABCC4O15439 SHF-207ENST00000560540 2062 ntTSL 5 BASIC30.69■■■□□ 2.5
ABCC4O15439 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
ABCC4O15439 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
ABCC4O15439 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC30.69■■■□□ 2.5
ABCC4O15439 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
ABCC4O15439 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
ABCC4O15439 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
ABCC4O15439 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC30.69■■■□□ 2.5
ABCC4O15439 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC30.68■■■□□ 2.5
ABCC4O15439 AC096887.2-201ENST00000623443 1957 ntBASIC30.68■■■□□ 2.5
ABCC4O15439 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
ABCC4O15439 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
ABCC4O15439 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC30.68■■■□□ 2.5
ABCC4O15439 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
ABCC4O15439 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
ABCC4O15439 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC30.68■■■□□ 2.5
ABCC4O15439 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC30.68■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms