Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.062e-7■□□□□ 8.8
LARP4Q71RC2 CTDNEP1-206ENST00000571409 741 ntTSL 527.67■■■□□ 2.022e-7■□□□□ 8.8
LARP4Q71RC2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.82e-7■□□□□ 8.8
LARP4Q71RC2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.242e-7■□□□□ 8.8
LARP4Q71RC2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.25■□□□□ 0.192e-7■□□□□ 8.8
LARP4Q71RC2 CTDNEP1-211ENST00000575783 876 ntTSL 514.55□□□□□ -0.082e-7■□□□□ 8.8
LARP4Q71RC2 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.098e-15■□□□□ 8.8
LARP4Q71RC2 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.47□□□□□ -0.098e-15■□□□□ 8.8
LARP4Q71RC2 FTH1-206ENST00000530019 550 ntTSL 414.47□□□□□ -0.098e-15■□□□□ 8.8
LARP4Q71RC2 FTH1-210ENST00000534180 983 ntTSL 212.36□□□□□ -0.438e-15■□□□□ 8.8
LARP4Q71RC2 FTH1-208ENST00000532829 912 ntTSL 212.29□□□□□ -0.448e-15■□□□□ 8.8
LARP4Q71RC2 FTH1-205ENST00000529631 507 ntTSL 4 BASIC11.55□□□□□ -0.568e-15■□□□□ 8.8
LARP4Q71RC2 FTH1-203ENST00000529191 530 ntTSL 2 BASIC10.3□□□□□ -0.768e-15■□□□□ 8.8
LARP4Q71RC2 FTH1-207ENST00000532601 742 ntTSL 3 BASIC8.06□□□□□ -1.128e-15■□□□□ 8.8
LARP4Q71RC2 FTH1-212ENST00000620041 825 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.218e-15■□□□□ 8.8
LARP4Q71RC2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.671e-8■□□□□ 8.8
LARP4Q71RC2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.411e-8■□□□□ 8.8
LARP4Q71RC2 RAD23A-208ENST00000591499 1350 ntTSL 217.58■□□□□ 0.41e-8■□□□□ 8.8
LARP4Q71RC2 RAD23A-210ENST00000593114 1691 ntTSL 515.88■□□□□ 0.131e-8■□□□□ 8.8
LARP4Q71RC2 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.02□□□□□ -0.161e-8■□□□□ 8.8
LARP4Q71RC2 RAD23A-202ENST00000586375 894 ntTSL 314□□□□□ -0.171e-8■□□□□ 8.8
LARP4Q71RC2 RAD23A-206ENST00000590881 999 ntTSL 512.8□□□□□ -0.361e-8■□□□□ 8.8
LARP4Q71RC2 TKFC-210ENST00000529479 1781 ntTSL 1 (best)19.79■□□□□ 0.769e-8■□□□□ 8.8
LARP4Q71RC2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.118e-8■□□□□ 8.8
LARP4Q71RC2 SLC7A5-202ENST00000563489 780 ntTSL 214.11□□□□□ -0.155e-24■□□□□ 8.8
LARP4Q71RC2 COL18A1-207ENST00000473212 2515 ntTSL 221.16■□□□□ 0.982e-8■□□□□ 8.8
LARP4Q71RC2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.342e-8■□□□□ 8.8
LARP4Q71RC2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.022e-8■□□□□ 8.8
LARP4Q71RC2 COL18A1-201ENST00000342220 3386 ntTSL 212.71□□□□□ -0.382e-8■□□□□ 8.8
LARP4Q71RC2 PSMB4-205ENST00000493673 1650 ntTSL 514.6□□□□□ -0.072e-8■□□□□ 8.8
LARP4Q71RC2 PSMB4-204ENST00000476467 2067 ntTSL 212.63□□□□□ -0.392e-8■□□□□ 8.8
LARP4Q71RC2 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.412e-8■□□□□ 8.8
LARP4Q71RC2 PSMB4-203ENST00000474100 755 ntTSL 56.78□□□□□ -1.322e-8■□□□□ 8.8
LARP4Q71RC2 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC11.38□□□□□ -0.592e-28■□□□□ 8.8
LARP4Q71RC2 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.227e-12■□□□□ 8.8
LARP4Q71RC2 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.227e-12■□□□□ 8.8
LARP4Q71RC2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.02■■□□□ 1.282e-12■□□□□ 8.8
LARP4Q71RC2 SELENOP-211ENST00000513303 714 ntTSL 211.78□□□□□ -0.526e-23■□□□□ 8.8
LARP4Q71RC2 SELENOP-208ENST00000510965 787 ntTSL 511.29□□□□□ -0.66e-23■□□□□ 8.8
LARP4Q71RC2 SELENOP-201ENST00000505309 573 ntTSL 210.15□□□□□ -0.786e-23■□□□□ 8.8
LARP4Q71RC2 SELENOP-215ENST00000515626 566 ntTSL 49.34□□□□□ -0.916e-23■□□□□ 8.8
LARP4Q71RC2 SELENOP-206ENST00000509276 738 ntTSL 58.76□□□□□ -1.016e-23■□□□□ 8.8
LARP4Q71RC2 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.056e-23■□□□□ 8.8
LARP4Q71RC2 SELENOP-202ENST00000506078 799 ntTSL 28.01□□□□□ -1.136e-23■□□□□ 8.8
LARP4Q71RC2 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.136e-23■□□□□ 8.8
LARP4Q71RC2 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC7.27□□□□□ -1.256e-23■□□□□ 8.8
LARP4Q71RC2 SELENOP-205ENST00000508937 606 ntTSL 27.27□□□□□ -1.256e-23■□□□□ 8.8
LARP4Q71RC2 SELENOP-212ENST00000514218 1047 ntTSL 56.52□□□□□ -1.376e-23■□□□□ 8.8
LARP4Q71RC2 SELENOP-207ENST00000510650 580 ntTSL 34.78□□□□□ -1.646e-23■□□□□ 8.8
LARP4Q71RC2 PPP1CA-207ENST00000532279 552 ntTSL 320.91■□□□□ 0.944e-7■□□□□ 8.8
LARP4Q71RC2 DPH1-207ENST00000571710 2013 ntTSL 1 (best)19.86■□□□□ 0.774e-7■□□□□ 8.8
LARP4Q71RC2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.754e-7■□□□□ 8.8
LARP4Q71RC2 DPH1-205ENST00000570867 2265 ntTSL 219.15■□□□□ 0.664e-7■□□□□ 8.8
LARP4Q71RC2 SDC1-205ENST00000447124 591 ntTSL 418.88■□□□□ 0.614e-7■□□□□ 8.8
LARP4Q71RC2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.68■□□□□ 0.582e-8■□□□□ 8.8
LARP4Q71RC2 DPH1-210ENST00000572684 2607 ntTSL 216.82■□□□□ 0.284e-7■□□□□ 8.8
LARP4Q71RC2 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.174e-7■□□□□ 8.8
LARP4Q71RC2 DHRS1-210ENST00000561273 2027 ntTSL 515.92■□□□□ 0.144e-7■□□□□ 8.8
LARP4Q71RC2 ARF5-206ENST00000489673 566 ntTSL 215.84■□□□□ 0.134e-7■□□□□ 8.8
LARP4Q71RC2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.14e-7■□□□□ 8.8
LARP4Q71RC2 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.66■□□□□ 0.14e-7■□□□□ 8.8
LARP4Q71RC2 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.064e-7■□□□□ 8.8
LARP4Q71RC2 UGGT1-202ENST00000376723 6682 ntTSL 1 (best)14.85□□□□□ -0.034e-7■□□□□ 8.8
LARP4Q71RC2 DPH1-217ENST00000607788 775 ntTSL 514.37□□□□□ -0.114e-7■□□□□ 8.8
LARP4Q71RC2 CMC1-201ENST00000334841 724 ntTSL 314.35□□□□□ -0.114e-7■□□□□ 8.8
LARP4Q71RC2 M6PR-206ENST00000541507 2198 ntTSL 513.93□□□□□ -0.184e-7■□□□□ 8.8
LARP4Q71RC2 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.214e-7■□□□□ 8.8
LARP4Q71RC2 DHRS1-204ENST00000558340 1623 ntTSL 513.44□□□□□ -0.264e-7■□□□□ 8.8
LARP4Q71RC2 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.13□□□□□ -0.314e-7■□□□□ 8.8
LARP4Q71RC2 DHRS1-206ENST00000559088 719 ntTSL 313.02□□□□□ -0.334e-7■□□□□ 8.8
LARP4Q71RC2 DHRS1-211ENST00000561281 1181 ntTSL 1 (best)12.84□□□□□ -0.354e-7■□□□□ 8.8
LARP4Q71RC2 XPO1-206ENST00000428210 6776 ntTSL 212.71□□□□□ -0.374e-7■□□□□ 8.8
LARP4Q71RC2 M6PR-204ENST00000539143 650 ntTSL 512.64□□□□□ -0.394e-7■□□□□ 8.8
LARP4Q71RC2 UBXN4-201ENST00000272638 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.441e-9■□□□□ 8.8
LARP4Q71RC2 CTNNB1-203ENST00000396185 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.464e-7■□□□□ 8.8
LARP4Q71RC2 M6PR-201ENST00000000412 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.484e-7■□□□□ 8.8
LARP4Q71RC2 CTNNB1-212ENST00000471014 607 ntTSL 311.64□□□□□ -0.554e-7■□□□□ 8.8
LARP4Q71RC2 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.574e-7■□□□□ 8.8
LARP4Q71RC2 DHRS1-209ENST00000561137 2660 ntTSL 211.41□□□□□ -0.584e-7■□□□□ 8.8
LARP4Q71RC2 M6PR-209ENST00000543704 616 ntTSL 311.37□□□□□ -0.594e-7■□□□□ 8.8
LARP4Q71RC2 ARF5-202ENST00000415666 546 ntTSL 511.32□□□□□ -0.64e-7■□□□□ 8.8
LARP4Q71RC2 DHRS1-205ENST00000559084 528 nt11.14□□□□□ -0.634e-7■□□□□ 8.8
LARP4Q71RC2 DHRS1-202ENST00000396813 1470 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.654e-7■□□□□ 8.8
LARP4Q71RC2 CMC1-205ENST00000466830 6033 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.674e-7■□□□□ 8.8
LARP4Q71RC2 HNRNPA2B1-207ENST00000495810 482 ntTSL 29.63□□□□□ -0.874e-7■□□□□ 8.8
LARP4Q71RC2 CMC1-209ENST00000477739 3749 ntTSL 1 (best)9.62□□□□□ -0.874e-7■□□□□ 8.8
LARP4Q71RC2 NASP-209ENST00000472408 541 ntTSL 29.42□□□□□ -0.94e-7■□□□□ 8.8
LARP4Q71RC2 M6PR-212ENST00000544193 255 ntTSL 39.22□□□□□ -0.934e-7■□□□□ 8.8
LARP4Q71RC2 UGGT1-203ENST00000418197 599 ntTSL 58.85□□□□□ -0.994e-7■□□□□ 8.8
LARP4Q71RC2 SELENOF-205ENST00000469566 831 ntTSL 28.71□□□□□ -1.022e-8■□□□□ 8.8
LARP4Q71RC2 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.054e-7■□□□□ 8.8
LARP4Q71RC2 COPS6-204ENST00000426712 716 ntTSL 37.98□□□□□ -1.134e-7■□□□□ 8.8
LARP4Q71RC2 UGGT1-206ENST00000465836 517 ntTSL 27.06□□□□□ -1.284e-7■□□□□ 8.8
LARP4Q71RC2 CMC1-208ENST00000469102 788 ntTSL 1 (best)6.71□□□□□ -1.344e-7■□□□□ 8.8
LARP4Q71RC2 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC6.69□□□□□ -1.344e-7■□□□□ 8.8
LARP4Q71RC2 PRCP-205ENST00000526918 537 ntTSL 46.15□□□□□ -1.424e-7■□□□□ 8.8
LARP4Q71RC2 CMC1-210ENST00000482499 446 ntTSL 26.05□□□□□ -1.444e-7■□□□□ 8.8
LARP4Q71RC2 XPO1-209ENST00000443240 565 ntTSL 45.95□□□□□ -1.464e-7■□□□□ 8.8
LARP4Q71RC2 CMC1-202ENST00000396610 593 ntTSL 25.79□□□□□ -1.484e-7■□□□□ 8.8
LARP4Q71RC2 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.494e-7■□□□□ 8.8
Retrieved 100 of 15,922 protein–RNA pairs in 342.3 ms