Protein–RNA interactions for Protein: Q96N35

LINC00052, Putative uncharacterized protein encoded by LINC00052, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00052Q96N35 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.77■□□□□ 0.76
LINC00052Q96N35 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.77■□□□□ 0.75
LINC00052Q96N35 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
LINC00052Q96N35 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
LINC00052Q96N35 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.76■□□□□ 0.75
LINC00052Q96N35 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LINC00052Q96N35 SLC25A24-204ENST00000569674 2357 ntBASIC19.76■□□□□ 0.75
LINC00052Q96N35 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LINC00052Q96N35 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LINC00052Q96N35 DENR-202ENST00000455982 1052 ntTSL 5 BASIC19.76■□□□□ 0.75
LINC00052Q96N35 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.76■□□□□ 0.75
LINC00052Q96N35 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC00052Q96N35 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
LINC00052Q96N35 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.75■□□□□ 0.75
LINC00052Q96N35 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC00052Q96N35 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC00052Q96N35 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
LINC00052Q96N35 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC00052Q96N35 AC010864.1-201ENST00000609407 1511 ntBASIC19.75■□□□□ 0.75
LINC00052Q96N35 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LINC00052Q96N35 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.75■□□□□ 0.75
LINC00052Q96N35 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC00052Q96N35 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
LINC00052Q96N35 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00052Q96N35 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00052Q96N35 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00052Q96N35 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00052Q96N35 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00052Q96N35 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00052Q96N35 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LINC00052Q96N35 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00052Q96N35 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00052Q96N35 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LINC00052Q96N35 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LINC00052Q96N35 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LINC00052Q96N35 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LINC00052Q96N35 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC19.73■□□□□ 0.75
LINC00052Q96N35 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.73■□□□□ 0.75
LINC00052Q96N35 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LINC00052Q96N35 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.73■□□□□ 0.75
LINC00052Q96N35 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.72■□□□□ 0.75
LINC00052Q96N35 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINC00052Q96N35 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINC00052Q96N35 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LINC00052Q96N35 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINC00052Q96N35 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.72■□□□□ 0.75
LINC00052Q96N35 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LINC00052Q96N35 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
LINC00052Q96N35 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.72■□□□□ 0.75
LINC00052Q96N35 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LINC00052Q96N35 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.72■□□□□ 0.75
LINC00052Q96N35 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINC00052Q96N35 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
LINC00052Q96N35 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINC00052Q96N35 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
LINC00052Q96N35 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.71■□□□□ 0.75
LINC00052Q96N35 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LINC00052Q96N35 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.71■□□□□ 0.75
LINC00052Q96N35 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LINC00052Q96N35 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
LINC00052Q96N35 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LINC00052Q96N35 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LINC00052Q96N35 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LINC00052Q96N35 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LINC00052Q96N35 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
LINC00052Q96N35 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
LINC00052Q96N35 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC19.7■□□□□ 0.74
LINC00052Q96N35 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.7■□□□□ 0.74
LINC00052Q96N35 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LINC00052Q96N35 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
LINC00052Q96N35 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
LINC00052Q96N35 DUSP8P5-201ENST00000422884 1815 ntBASIC19.69■□□□□ 0.74
LINC00052Q96N35 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
LINC00052Q96N35 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINC00052Q96N35 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINC00052Q96N35 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LINC00052Q96N35 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LINC00052Q96N35 AC097639.1-201ENST00000565519 1891 ntBASIC19.69■□□□□ 0.74
LINC00052Q96N35 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.68■□□□□ 0.74
LINC00052Q96N35 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINC00052Q96N35 AC022211.4-201ENST00000625094 2161 ntBASIC19.68■□□□□ 0.74
LINC00052Q96N35 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINC00052Q96N35 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LINC00052Q96N35 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC00052Q96N35 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.67■□□□□ 0.74
LINC00052Q96N35 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LINC00052Q96N35 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC00052Q96N35 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LINC00052Q96N35 LINC00565-201ENST00000562710 2331 ntBASIC19.67■□□□□ 0.74
LINC00052Q96N35 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.67■□□□□ 0.74
LINC00052Q96N35 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
LINC00052Q96N35 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC00052Q96N35 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC00052Q96N35 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LINC00052Q96N35 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
LINC00052Q96N35 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LINC00052Q96N35 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LINC00052Q96N35 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LINC00052Q96N35 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LINC00052Q96N35 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms