Protein–RNA interactions for Protein: P38353

SSH1, Sec sixty-one protein homolog, yeastyeast

Known RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH1P38353 YAR064WYAR064W 300 nt5.67□□□□□ -1.5
SSH1P38353 RUF23RUF23 254 nt5.67□□□□□ -1.5
SSH1P38353 COQ3YOL096C 939 nt5.67□□□□□ -1.5
SSH1P38353 RKI1YOR095C 777 nt5.67□□□□□ -1.5
SSH1P38353 COX20YDR231C 618 nt5.66□□□□□ -1.5
SSH1P38353 SPG1YGR236C 288 nt5.66□□□□□ -1.5
SSH1P38353 LYS1YIR034C 1122 nt5.66□□□□□ -1.5
SSH1P38353 URA1YKL216W 945 nt5.66□□□□□ -1.5
SSH1P38353 GEF1YJR040W 2340 nt5.66□□□□□ -1.5
SSH1P38353 GEX1YCL073C 1848 nt5.66□□□□□ -1.5
SSH1P38353 GEX2YKR106W 1848 nt5.66□□□□□ -1.5
SSH1P38353 HSP150YJL159W 1242 nt5.65□□□□□ -1.5
SSH1P38353 MDE1YJR024C 735 nt5.65□□□□□ -1.5
SSH1P38353 LDB16YCL005W 771 nt5.65□□□□□ -1.5
SSH1P38353 CCC2YDR270W 3015 nt5.65□□□□□ -1.51
SSH1P38353 YMR279CYMR279C 1623 nt5.64□□□□□ -1.51
SSH1P38353 YDL085C-AYDL085C-A 207 nt5.64□□□□□ -1.51
SSH1P38353 DMA1YHR115C 1251 nt5.64□□□□□ -1.51
SSH1P38353 COS10YNR075W 1125 nt5.64□□□□□ -1.51
SSH1P38353 LSC1YOR142W 990 nt5.64□□□□□ -1.51
SSH1P38353 CTF19YPL018W 1110 nt5.64□□□□□ -1.51
SSH1P38353 CRP1YHR146W 1398 nt5.64□□□□□ -1.51
SSH1P38353 PLB3YOL011W 2061 nt5.63□□□□□ -1.51
SSH1P38353 YDR387CYDR387C 1668 nt5.63□□□□□ -1.51
SSH1P38353 VMA3YEL027W 483 nt5.63□□□□□ -1.51
SSH1P38353 RHO4YKR055W 876 nt5.63□□□□□ -1.51
SSH1P38353 GPB2YAL056W 2643 nt5.62□□□□□ -1.51
SSH1P38353 PAP2YOL115W 1755 nt5.62□□□□□ -1.51
SSH1P38353 YGR054WYGR054W 1929 nt5.62□□□□□ -1.51
SSH1P38353 ARE2YNR019W 1929 nt5.62□□□□□ -1.51
SSH1P38353 SCT1YBL011W 2280 nt5.62□□□□□ -1.51
SSH1P38353 ALT1YLR089C 1779 nt5.62□□□□□ -1.51
SSH1P38353 PDR18YNR070W 4002 nt5.61□□□□□ -1.51
SSH1P38353 GPD1YDL022W 1176 nt5.61□□□□□ -1.51
SSH1P38353 LCL3YGL085W 825 nt5.61□□□□□ -1.51
SSH1P38353 KEL1YHR158C 3495 nt5.61□□□□□ -1.51
SSH1P38353 SET5YHR207C 1581 nt5.61□□□□□ -1.51
SSH1P38353 CCT8YJL008C 1707 nt5.61□□□□□ -1.51
SSH1P38353 GUP2YPL189W 1830 nt5.61□□□□□ -1.51
SSH1P38353 ECM31YBR176W 939 nt5.61□□□□□ -1.51
SSH1P38353 AFG1YEL052W 1530 nt5.6□□□□□ -1.51
SSH1P38353 CYS4YGR155W 1524 nt5.6□□□□□ -1.51
SSH1P38353 QCR8YJL166W 285 nt5.6□□□□□ -1.51
SSH1P38353 TAF9YMR236W 474 nt5.6□□□□□ -1.51
SSH1P38353 PUS4YNL292W 1212 nt5.6□□□□□ -1.51
SSH1P38353 RNR3YIL066C 2610 nt5.6□□□□□ -1.51
SSH1P38353 ESC8YOL017W 2145 nt5.59□□□□□ -1.51
SSH1P38353 CDC11YJR076C 1248 nt5.59□□□□□ -1.51
SSH1P38353 MEH1YKR007W 555 nt5.59□□□□□ -1.51
SSH1P38353 MRPS18YNL306W 654 nt5.59□□□□□ -1.51
SSH1P38353 RDL2YOR286W 450 nt5.59□□□□□ -1.51
SSH1P38353 FLC3YGL139W 2409 nt5.59□□□□□ -1.51
SSH1P38353 GUF1YLR289W 1938 nt5.58□□□□□ -1.52
SSH1P38353 PGM1YKL127W 1713 nt5.58□□□□□ -1.52
SSH1P38353 MRPL35YDR322W 1104 nt5.58□□□□□ -1.52
SSH1P38353 MSO1YNR049C 633 nt5.58□□□□□ -1.52
SSH1P38353 MOD5YOR274W 1287 nt5.58□□□□□ -1.52
SSH1P38353 YML133CYML133C 4125 nt5.58□□□□□ -1.52
SSH1P38353 ERG7YHR072W 2196 nt5.57□□□□□ -1.52
SSH1P38353 MSN2YMR037C 2115 nt5.57□□□□□ -1.52
SSH1P38353 OM45YIL136W 1182 nt5.57□□□□□ -1.52
SSH1P38353 LCB3YJL134W 1230 nt5.57□□□□□ -1.52
SSH1P38353 SRL2YLR082C 1179 nt5.57□□□□□ -1.52
SSH1P38353 PEX13YLR191W 1161 nt5.57□□□□□ -1.52
SSH1P38353 IES2YNL215W 963 nt5.57□□□□□ -1.52
SSH1P38353 KTR1YOR099W 1182 nt5.57□□□□□ -1.52
SSH1P38353 SAL1YNL083W 1485 nt5.57□□□□□ -1.52
SSH1P38353 PRY3YJL078C 2646 nt5.56□□□□□ -1.52
SSH1P38353 GAA1YLR088W 1845 nt5.56□□□□□ -1.52
SSH1P38353 VPS61YDR136C 573 nt5.56□□□□□ -1.52
SSH1P38353 GCG1YER163C 699 nt5.56□□□□□ -1.52
SSH1P38353 ICS3YJL077C 396 nt5.55□□□□□ -1.52
SSH1P38353 YJL171CYJL171C 1191 nt5.55□□□□□ -1.52
SSH1P38353 MHT1YLL062C 975 nt5.55□□□□□ -1.52
SSH1P38353 DUS4YLR405W 1104 nt5.55□□□□□ -1.52
SSH1P38353 GTO3YMR251W 1101 nt5.55□□□□□ -1.52
SSH1P38353 BSC4YNL269W 396 nt5.55□□□□□ -1.52
SSH1P38353 EIS1YMR031C 2532 nt5.54□□□□□ -1.52
SSH1P38353 GPD2YOL059W 1323 nt5.54□□□□□ -1.52
SSH1P38353 MRPL1YDR116C 858 nt5.54□□□□□ -1.52
SSH1P38353 PTC4YBR125C 1182 nt5.54□□□□□ -1.52
SSH1P38353 ERG8YMR220W 1356 nt5.54□□□□□ -1.52
SSH1P38353 CHL4YDR254W 1377 nt5.53□□□□□ -1.52
SSH1P38353 PPT1YGR123C 1542 nt5.53□□□□□ -1.52
SSH1P38353 VBA1YMR088C 1689 nt5.53□□□□□ -1.52
SSH1P38353 AAP1YHR047C 2571 nt5.53□□□□□ -1.52
SSH1P38353 POP5YAL033W 522 nt5.52□□□□□ -1.53
SSH1P38353 YKR045CYKR045C 552 nt5.52□□□□□ -1.53
SSH1P38353 TSR2YLR435W 618 nt5.52□□□□□ -1.53
SSH1P38353 PTC3YBL056W 1407 nt5.51□□□□□ -1.53
SSH1P38353 YIL029W-AYIL029W-A 372 nt5.51□□□□□ -1.53
SSH1P38353 CIS3YJL158C 684 nt5.51□□□□□ -1.53
SSH1P38353 RPL21AYBR191W 483 nt5.51□□□□□ -1.53
SSH1P38353 HAS1YMR290C 1518 nt5.5□□□□□ -1.53
SSH1P38353 YDR278CYDR278C 318 nt5.5□□□□□ -1.53
SSH1P38353 COA1YIL157C 594 nt5.5□□□□□ -1.53
SSH1P38353 PSR2YLR019W 1194 nt5.5□□□□□ -1.53
SSH1P38353 TPO3YPR156C 1869 nt5.49□□□□□ -1.53
SSH1P38353 HSP104YLL026W 2727 nt5.49□□□□□ -1.53
SSH1P38353 GPI11YDR302W 660 nt5.49□□□□□ -1.53
Retrieved 100 of 7,029 protein–RNA pairs in 111.4 ms