Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 KNS1YLL019C 2214 nt7.46□□□□□ -1.22
MSH3P25336 RPL31BYLR406C 342 nt7.45□□□□□ -1.22
MSH3P25336 DSC2YOL073C 969 nt7.45□□□□□ -1.22
MSH3P25336 ECM2YBR065C 1095 nt7.45□□□□□ -1.22
MSH3P25336 ARP3YJR065C 1350 nt7.45□□□□□ -1.22
MSH3P25336 PHO3YBR092C 1404 nt7.44□□□□□ -1.22
MSH3P25336 YHR022CYHR022C 771 nt7.44□□□□□ -1.22
MSH3P25336 CBR1YIL043C 855 nt7.44□□□□□ -1.22
MSH3P25336 YHC3YJL059W 1227 nt7.44□□□□□ -1.22
MSH3P25336 YBR226CYBR226C 411 nt7.44□□□□□ -1.22
MSH3P25336 YPL247CYPL247C 1572 nt7.44□□□□□ -1.22
MSH3P25336 YDL129WYDL129W 876 nt7.43□□□□□ -1.22
MSH3P25336 HSP12YFL014W 330 nt7.43□□□□□ -1.22
MSH3P25336 YLR162WYLR162W 357 nt7.43□□□□□ -1.22
MSH3P25336 RPR1RPR1 369 nt7.43□□□□□ -1.22
MSH3P25336 PPA2YMR267W 933 nt7.43□□□□□ -1.22
MSH3P25336 YNL017CYNL017C 339 nt7.43□□□□□ -1.22
MSH3P25336 KTR3YBR205W 1215 nt7.43□□□□□ -1.22
MSH3P25336 CLD1YGR110W 1338 nt7.43□□□□□ -1.22
MSH3P25336 HXK2YGL253W 1461 nt7.43□□□□□ -1.22
MSH3P25336 YDL177CYDL177C 513 nt7.42□□□□□ -1.22
MSH3P25336 YIR043CYIR043C 693 nt7.42□□□□□ -1.22
MSH3P25336 PCL9YDL179W 915 nt7.41□□□□□ -1.22
MSH3P25336 YFL013W-AYFL013W-A 804 nt7.41□□□□□ -1.22
MSH3P25336 YSC83YHR017W 1158 nt7.41□□□□□ -1.22
MSH3P25336 CBT1YKL208W 816 nt7.41□□□□□ -1.22
MSH3P25336 OPI11YPR044C 354 nt7.41□□□□□ -1.22
MSH3P25336 ISC1YER019W 1434 nt7.41□□□□□ -1.22
MSH3P25336 HAL5YJL165C 2568 nt7.4□□□□□ -1.22
MSH3P25336 snR82snR82 268 nt7.4□□□□□ -1.22
MSH3P25336 YGR127WYGR127W 939 nt7.4□□□□□ -1.22
MSH3P25336 PRI1YIR008C 1230 nt7.4□□□□□ -1.22
MSH3P25336 RNH1YMR234W 1047 nt7.4□□□□□ -1.22
MSH3P25336 YNL319WYNL319W 441 nt7.4□□□□□ -1.22
MSH3P25336 YOL024WYOL024W 519 nt7.4□□□□□ -1.22
MSH3P25336 RPL5YPL131W 894 nt7.4□□□□□ -1.22
MSH3P25336 TIP41YPR040W 1071 nt7.4□□□□□ -1.22
MSH3P25336 CLB5YPR120C 1308 nt7.4□□□□□ -1.22
MSH3P25336 CTF18YMR078C 2226 nt7.4□□□□□ -1.23
MSH3P25336 CSC1YLR241W 2349 nt7.4□□□□□ -1.23
MSH3P25336 YIL055CYIL055C 1884 nt7.39□□□□□ -1.23
MSH3P25336 RMD5YDR255C 1266 nt7.39□□□□□ -1.23
MSH3P25336 YGL102CYGL102C 429 nt7.39□□□□□ -1.23
MSH3P25336 IRC11YOR013W 471 nt7.39□□□□□ -1.23
MSH3P25336 PEX27YOR193W 1131 nt7.39□□□□□ -1.23
MSH3P25336 UBS1YBR165W 834 nt7.39□□□□□ -1.23
MSH3P25336 RIO1YOR119C 1455 nt7.38□□□□□ -1.23
MSH3P25336 LAT1YNL071W 1449 nt7.38□□□□□ -1.23
MSH3P25336 PEX31YGR004W 1389 nt7.38□□□□□ -1.23
MSH3P25336 MPC54YOR177C 1395 nt7.38□□□□□ -1.23
MSH3P25336 YMR034CYMR034C 1305 nt7.38□□□□□ -1.23
MSH3P25336 OPI8YKR035C 642 nt7.38□□□□□ -1.23
MSH3P25336 TSR2YLR435W 618 nt7.38□□□□□ -1.23
MSH3P25336 SUR7YML052W 909 nt7.38□□□□□ -1.23
MSH3P25336 SMX3YPR182W 261 nt7.38□□□□□ -1.23
MSH3P25336 SLX5YDL013W 1860 nt7.38□□□□□ -1.23
MSH3P25336 ICP55YER078C 1536 nt7.37□□□□□ -1.23
MSH3P25336 YDL158CYDL158C 309 nt7.37□□□□□ -1.23
MSH3P25336 YPR1YDR368W 939 nt7.37□□□□□ -1.23
MSH3P25336 SML1YML058W 315 nt7.37□□□□□ -1.23
MSH3P25336 CNM67YNL225C 1746 nt7.37□□□□□ -1.23
MSH3P25336 ARO9YHR137W 1542 nt7.37□□□□□ -1.23
MSH3P25336 YDL241WYDL241W 372 nt7.36□□□□□ -1.23
MSH3P25336 TRP4YDR354W 1143 nt7.36□□□□□ -1.23
MSH3P25336 RRP46YGR095C 672 nt7.36□□□□□ -1.23
MSH3P25336 YUR1YJL139C 1287 nt7.36□□□□□ -1.23
MSH3P25336 YOX1YML027W 1158 nt7.36□□□□□ -1.23
MSH3P25336 COS10YNR075W 1125 nt7.36□□□□□ -1.23
MSH3P25336 FIT2YOR382W 462 nt7.36□□□□□ -1.23
MSH3P25336 MSC3YLR219W 2187 nt7.36□□□□□ -1.23
MSH3P25336 YHR020WYHR020W 2067 nt7.36□□□□□ -1.23
MSH3P25336 YJL163CYJL163C 1668 nt7.35□□□□□ -1.23
MSH3P25336 GDA1YEL042W 1557 nt7.35□□□□□ -1.23
MSH3P25336 HIS1YER055C 894 nt7.35□□□□□ -1.23
MSH3P25336 THI4YGR144W 981 nt7.35□□□□□ -1.23
MSH3P25336 GTO1YGR154C 1071 nt7.35□□□□□ -1.23
MSH3P25336 DYS1YHR068W 1164 nt7.35□□□□□ -1.23
MSH3P25336 GCN3YKR026C 918 nt7.35□□□□□ -1.23
MSH3P25336 YLR169WYLR169W 354 nt7.35□□□□□ -1.23
MSH3P25336 PCL1YNL289W 840 nt7.35□□□□□ -1.23
MSH3P25336 SEC62YPL094C 825 nt7.35□□□□□ -1.23
MSH3P25336 SLX1YBR228W 915 nt7.35□□□□□ -1.23
MSH3P25336 BSC5YNR069C 1470 nt7.35□□□□□ -1.23
MSH3P25336 SPO77YLR341W 1434 nt7.35□□□□□ -1.23
MSH3P25336 YLR198CYLR198C 360 nt7.34□□□□□ -1.23
MSH3P25336 CTR3YLR411W 726 nt7.34□□□□□ -1.23
MSH3P25336 ZIM17YNL310C 525 nt7.34□□□□□ -1.23
MSH3P25336 RFA2YNL312W 822 nt7.34□□□□□ -1.23
MSH3P25336 SSP2YOR242C 1116 nt7.34□□□□□ -1.23
MSH3P25336 NUP49YGL172W 1419 nt7.34□□□□□ -1.23
MSH3P25336 ATP12YJL180C 978 nt7.33□□□□□ -1.24
MSH3P25336 YLL056CYLL056C 897 nt7.33□□□□□ -1.24
MSH3P25336 MRPS8YMR158W 468 nt7.33□□□□□ -1.24
MSH3P25336 TOS6YNL300W 309 nt7.33□□□□□ -1.24
MSH3P25336 RGD1YBR260C 2001 nt7.33□□□□□ -1.24
MSH3P25336 STT3YGL022W 2157 nt7.33□□□□□ -1.24
MSH3P25336 GEF1YJR040W 2340 nt7.33□□□□□ -1.24
MSH3P25336 RTG3YBL103C 1461 nt7.32□□□□□ -1.24
MSH3P25336 MCM21YDR318W 1107 nt7.32□□□□□ -1.24
MSH3P25336 SPC42YKL042W 1092 nt7.32□□□□□ -1.24
Retrieved 100 of 7,029 protein–RNA pairs in 29 ms