Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC11.43□□□□□ -0.589e-8■□□□□ 8.1
SRSF1Q07955 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC11.4□□□□□ -0.589e-8■□□□□ 8.1
SRSF1Q07955 E2F6-206ENST00000444832 3296 ntTSL 1 (best)11.4□□□□□ -0.589e-8■□□□□ 8.1
SRSF1Q07955 IL17RB-201ENST00000288167 2010 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.591e-7■□□□□ 8.1
SRSF1Q07955 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC11.3□□□□□ -0.69e-8■□□□□ 8.1
SRSF1Q07955 CHFR-221ENST00000542714 542 ntTSL 411.21□□□□□ -0.614e-6■□□□□ 8.1
SRSF1Q07955 TUBGCP6-206ENST00000489511 612 ntTSL 1 (best)11.1□□□□□ -0.639e-8■□□□□ 8.1
SRSF1Q07955 USP7-215ENST00000566273 577 ntTSL 411.08□□□□□ -0.641e-7■□□□□ 8.1
SRSF1Q07955 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC10.9□□□□□ -0.664e-6■□□□□ 8.1
SRSF1Q07955 RNF4-212ENST00000509258 893 ntTSL 1 (best) BASIC10.72□□□□□ -0.694e-6■□□□□ 8.1
SRSF1Q07955 CHFR-220ENST00000541817 758 ntTSL 510.72□□□□□ -0.694e-6■□□□□ 8.1
SRSF1Q07955 PPIG-211ENST00000530152 690 ntTSL 310.58□□□□□ -0.724e-6■□□□□ 8.1
SRSF1Q07955 ARL6IP4-202ENST00000357866 546 ntTSL 1 (best) BASIC10.43□□□□□ -0.744e-6■□□□□ 8.1
SRSF1Q07955 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.821e-7■□□□□ 8.1
SRSF1Q07955 USP7-214ENST00000566224 503 ntTSL 39.93□□□□□ -0.821e-7■□□□□ 8.1
SRSF1Q07955 RNF4-201ENST00000314289 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.864e-6■□□□□ 8.1
SRSF1Q07955 SPATS2L-208ENST00000409718 2648 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.884e-6■□□□□ 8.1
SRSF1Q07955 RNF4-222ENST00000541204 2796 ntTSL 1 (best) BASIC9.49□□□□□ -0.894e-6■□□□□ 8.1
SRSF1Q07955 CHFR-201ENST00000266880 11133 ntTSL 2 BASIC9.45□□□□□ -0.94e-6■□□□□ 8.1
SRSF1Q07955 TUBGCP6-207ENST00000491449 4044 ntTSL 59.42□□□□□ -0.99e-8■□□□□ 8.1
SRSF1Q07955 SMG7-212ENST00000507469 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.931e-7■□□□□ 8.1
SRSF1Q07955 RNF4-221ENST00000513643 516 ntTSL 39.08□□□□□ -0.964e-6■□□□□ 8.1
SRSF1Q07955 DDX41-203ENST00000504781 618 ntTSL 38.83□□□□□ -14e-6■□□□□ 8.1
SRSF1Q07955 IL17RB-202ENST00000475124 2822 ntTSL 28.65□□□□□ -1.021e-7■□□□□ 8.1
SRSF1Q07955 SMG7-201ENST00000347615 5788 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.061e-7■□□□□ 8.1
SRSF1Q07955 E2F6-207ENST00000455198 2227 ntTSL 1 (best)8.41□□□□□ -1.069e-8■□□□□ 8.1
SRSF1Q07955 SMG7-216ENST00000638826 219 ntTSL 2 BASIC8.34□□□□□ -1.071e-7■□□□□ 8.1
SRSF1Q07955 SPATS2L-206ENST00000409385 2320 ntTSL 2 BASIC8.23□□□□□ -1.094e-6■□□□□ 8.1
SRSF1Q07955 RNF4-203ENST00000503123 298 ntTSL 58.15□□□□□ -1.14e-6■□□□□ 8.1
SRSF1Q07955 SMG7-215ENST00000515829 5629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.111e-7■□□□□ 8.1
SRSF1Q07955 USP7-212ENST00000566004 559 ntTSL 47.7□□□□□ -1.181e-7■□□□□ 8.1
SRSF1Q07955 RNF4-220ENST00000513578 545 ntTSL 46.92□□□□□ -1.34e-6■□□□□ 8.1
SRSF1Q07955 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.31e-7■□□□□ 8.1
SRSF1Q07955 ANKHD1-201ENST00000246149 2062 ntTSL 26.86□□□□□ -1.314e-6■□□□□ 8.1
SRSF1Q07955 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.324e-6■□□□□ 8.1
SRSF1Q07955 SPATS2L-207ENST00000409397 920 ntTSL 36.71□□□□□ -1.344e-6■□□□□ 8.1
SRSF1Q07955 USP7-209ENST00000564117 479 ntTSL 46.53□□□□□ -1.361e-7■□□□□ 8.1
SRSF1Q07955 RNF4-217ENST00000511892 547 ntTSL 45.57□□□□□ -1.524e-6■□□□□ 8.1
SRSF1Q07955 PPIG-206ENST00000433207 1485 ntTSL 1 (best)5.33□□□□□ -1.564e-6■□□□□ 8.1
SRSF1Q07955 USP7-219ENST00000569230 569 ntTSL 55.33□□□□□ -1.561e-7■□□□□ 8.1
SRSF1Q07955 SPATS2L-215ENST00000439395 561 ntTSL 44.99□□□□□ -1.614e-6■□□□□ 8.1
SRSF1Q07955 ANKHD1-216ENST00000490185 829 ntTSL 24.91□□□□□ -1.624e-6■□□□□ 8.1
SRSF1Q07955 MATR3-202ENST00000502422 2250 ntTSL 1 (best)4.6□□□□□ -1.674e-6■□□□□ 8.1
SRSF1Q07955 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.48□□□□□ -1.694e-6■□□□□ 8.1
SRSF1Q07955 RNF4-211ENST00000509206 490 ntTSL 34.3□□□□□ -1.724e-6■□□□□ 8.1
SRSF1Q07955 MATR3-211ENST00000505625 7306 ntTSL 1 (best)4.24□□□□□ -1.734e-6■□□□□ 8.1
SRSF1Q07955 MATR3-226ENST00000515833 1001 ntTSL 53.69□□□□□ -1.824e-6■□□□□ 8.1
SRSF1Q07955 MATR3-217ENST00000511333 558 ntTSL 53.68□□□□□ -1.824e-6■□□□□ 8.1
SRSF1Q07955 TCIRG1-210ENST00000530063 220 ntTSL 1 (best)2.58□□□□□ -29e-8■□□□□ 8.1
SRSF1Q07955 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.523e-7■□□□□ 8.1
SRSF1Q07955 ACTR1B-203ENST00000460427 730 ntTSL 219.45■□□□□ 0.73e-7■□□□□ 8.1
SRSF1Q07955 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.663e-7■□□□□ 8.1
SRSF1Q07955 THAP7-205ENST00000471723 653 ntTSL 318.79■□□□□ 0.63e-7■□□□□ 8.1
SRSF1Q07955 THAP7-203ENST00000466670 1080 ntTSL 517.99■□□□□ 0.473e-7■□□□□ 8.1
SRSF1Q07955 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.353e-7■□□□□ 8.1
SRSF1Q07955 THAP7-206ENST00000476667 1671 ntTSL 517.09■□□□□ 0.333e-7■□□□□ 8.1
SRSF1Q07955 THAP7-208ENST00000498406 1957 ntTSL 216.56■□□□□ 0.243e-7■□□□□ 8.1
SRSF1Q07955 THAP7-204ENST00000471073 1809 ntTSL 216.11■□□□□ 0.173e-7■□□□□ 8.1
SRSF1Q07955 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.13e-7■□□□□ 8.1
SRSF1Q07955 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.32■□□□□ 0.043e-7■□□□□ 8.1
SRSF1Q07955 COASY-209ENST00000588353 387 ntTSL 315.03■□□□□ -03e-7■□□□□ 8.1
SRSF1Q07955 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.56□□□□□ -0.083e-7■□□□□ 8.1
SRSF1Q07955 COASY-214ENST00000591779 994 ntTSL 214.18□□□□□ -0.143e-7■□□□□ 8.1
SRSF1Q07955 COASY-213ENST00000591753 2225 ntTSL 1 (best)13.42□□□□□ -0.263e-7■□□□□ 8.1
SRSF1Q07955 ACTR1B-202ENST00000451664 1151 ntTSL 512.64□□□□□ -0.393e-7■□□□□ 8.1
SRSF1Q07955 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.543e-7■□□□□ 8.1
SRSF1Q07955 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC11.25□□□□□ -0.613e-7■□□□□ 8.1
SRSF1Q07955 COASY-201ENST00000393818 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.743e-7■□□□□ 8.1
SRSF1Q07955 NDUFV1-217ENST00000530014 766 ntTSL 520.53■□□□□ 0.886e-11■□□□□ 8.1
SRSF1Q07955 NDUFV1-211ENST00000528314 559 ntTSL 219.96■□□□□ 0.796e-11■□□□□ 8.1
SRSF1Q07955 NDUFV1-218ENST00000530103 544 ntTSL 516.52■□□□□ 0.246e-11■□□□□ 8.1
SRSF1Q07955 AP1G2-207ENST00000553685 561 ntTSL 1 (best)15.21■□□□□ 0.039e-8■□□□□ 8.1
SRSF1Q07955 RHBG-202ENST00000467375 923 ntTSL 312.48□□□□□ -0.411e-7■□□□□ 8.1
SRSF1Q07955 RBM39-222ENST00000461849 861 ntTSL 213.06□□□□□ -0.323e-27■□□□□ 8.1
SRSF1Q07955 IL4R-216ENST00000566117 529 ntTSL 522.2■■□□□ 1.143e-6■□□□□ 8.1
SRSF1Q07955 SSTR5-AS1-205ENST00000624643 1010 nt18.41■□□□□ 0.543e-6■□□□□ 8.1
SRSF1Q07955 SH3TC1-217ENST00000509119 509 ntTSL 316.72■□□□□ 0.273e-6■□□□□ 8.1
SRSF1Q07955 SH3TC1-211ENST00000507123 554 ntTSL 1 (best)16.17■□□□□ 0.183e-6■□□□□ 8.1
SRSF1Q07955 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.94■□□□□ 0.143e-6■□□□□ 8.1
SRSF1Q07955 SH3TC1-203ENST00000457650 617 ntTSL 515.45■□□□□ 0.063e-6■□□□□ 8.1
SRSF1Q07955 DDX17-209ENST00000479734 441 ntTSL 414.66□□□□□ -0.063e-6■□□□□ 8.1
SRSF1Q07955 SH3TC1-219ENST00000510763 543 ntTSL 414.45□□□□□ -0.13e-6■□□□□ 8.1
SRSF1Q07955 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.52□□□□□ -0.253e-6■□□□□ 8.1
SRSF1Q07955 SH3TC1-210ENST00000506360 5829 ntTSL 213.46□□□□□ -0.253e-6■□□□□ 8.1
SRSF1Q07955 SSTR5-AS1-202ENST00000566499 479 ntTSL 412.05□□□□□ -0.483e-6■□□□□ 8.1
SRSF1Q07955 SH3TC1-206ENST00000502669 3484 ntTSL 1 (best)11.44□□□□□ -0.583e-6■□□□□ 8.1
SRSF1Q07955 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC11.14□□□□□ -0.633e-6■□□□□ 8.1
SRSF1Q07955 SH3TC1-225ENST00000515682 4293 ntTSL 210.72□□□□□ -0.693e-6■□□□□ 8.1
SRSF1Q07955 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.763e-6■□□□□ 8.1
SRSF1Q07955 SEMA4G-205ENST00000517724 2675 ntTSL 1 (best) BASIC9.85□□□□□ -0.833e-6■□□□□ 8.1
SRSF1Q07955 SEMA4G-202ENST00000370250 3596 ntAPPRIS ALT1 TSL 5 BASIC8.23□□□□□ -1.093e-6■□□□□ 8.1
SRSF1Q07955 SEMA4G-201ENST00000210633 4094 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.123e-6■□□□□ 8.1
SRSF1Q07955 PMM2-203ENST00000562318 931 ntTSL 216.27■□□□□ 0.23e-10■□□□□ 8
SRSF1Q07955 PMM2-212ENST00000566604 986 ntTSL 215.09■□□□□ 0.013e-10■□□□□ 8
SRSF1Q07955 PMM2-207ENST00000565221 793 ntTSL 1 (best)14.1□□□□□ -0.153e-10■□□□□ 8
SRSF1Q07955 PMM2-211ENST00000566540 1557 ntTSL 1 (best)13.08□□□□□ -0.323e-10■□□□□ 8
SRSF1Q07955 PMM2-216ENST00000569958 698 ntTSL 2 BASIC12.21□□□□□ -0.453e-10■□□□□ 8
SRSF1Q07955 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.53e-10■□□□□ 8
SRSF1Q07955 PMM2-218ENST00000570134 573 ntTSL 511.36□□□□□ -0.593e-10■□□□□ 8
SRSF1Q07955 PMM2-204ENST00000562448 583 ntTSL 210.42□□□□□ -0.743e-10■□□□□ 8
Retrieved 100 of 14,836 protein–RNA pairs in 304.4 ms