RNA–Protein interactions for RNA: ENST00000564117.1

USP7-209, Transcript of ubiquitin specific peptidase 7, humanhuman

TSL 4

Gene USP7, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP7-209ENST00000564117 NISCHQ9Y2I1 1504 aa15.12■□□□□ 0.01
USP7-209ENST00000564117 ABCC9O60706 1549 aa14.61□□□□□ -0.07
USP7-209ENST00000564117 DNAJC5BQ9UF47 199 aa14.33□□□□□ -0.12
USP7-209ENST00000564117 CCDC180Q9P1Z9 1646 aa13.84□□□□□ -0.19
USP7-209ENST00000564117 DNAJC5Q9H3Z4 198 aa13.52□□□□□ -0.25
USP7-209ENST00000564117 PABPN1Q86U42 306 aaKnown RBP eCLIP13.51□□□□□ -0.25
USP7-209ENST00000564117 RB1CC1Q8TDY2 1594 aa13.5□□□□□ -0.25
USP7-209ENST00000564117 CHIC1Q5VXU3 224 aa13.39□□□□□ -0.27
USP7-209ENST00000564117 UNC13AQ9UPW8 1703 aa13.36□□□□□ -0.27
USP7-209ENST00000564117 BICRAQ9NZM4 1560 aa13.22□□□□□ -0.29
USP7-209ENST00000564117 NACADO15069 1562 aa13.2□□□□□ -0.3
USP7-209ENST00000564117 CECR2Q9BXF3 1484 aa13.16□□□□□ -0.3
USP7-209ENST00000564117 DCAF8L2P0C7V8 631 aa13.15□□□□□ -0.3
USP7-209ENST00000564117 CC2D2AQ9P2K1 1620 aa13.14□□□□□ -0.31
USP7-209ENST00000564117 AEBP2Q6ZN18 517 aaPredicted RBP13.1□□□□□ -0.31
USP7-209ENST00000564117 EIF4G1Q04637 1599 aaKnown RBP12.91□□□□□ -0.34
USP7-209ENST00000564117 TRIM41Q8WV44 630 aa12.78□□□□□ -0.36
USP7-209ENST00000564117 SHROOM4Q9ULL8 1493 aa12.75□□□□□ -0.37
USP7-209ENST00000564117 CUX2O14529 1486 aa12.73□□□□□ -0.37
USP7-209ENST00000564117 MYO15BQ96JP2 1530 aa12.72□□□□□ -0.37
USP7-209ENST00000564117 SCRIBQ14160 1630 aa12.7□□□□□ -0.38
USP7-209ENST00000564117 ERCC6Q03468 1493 aa12.59□□□□□ -0.39
USP7-209ENST00000564117 NESP48681 1621 aa12.38□□□□□ -0.43
USP7-209ENST00000564117 ZCCHC6Q5VYS8 1495 aaKnown RBP12.38□□□□□ -0.43
USP7-209ENST00000564117 THOC2Q8NI27 1593 aaKnown RBP12.35□□□□□ -0.43
USP7-209ENST00000564117 DCAF1Q9Y4B6 1507 aa12.34□□□□□ -0.43
USP7-209ENST00000564117 SMARCA2P51531 1590 aa12.26□□□□□ -0.45
USP7-209ENST00000564117 KIF21AQ7Z4S6 1674 aa12.22□□□□□ -0.45
USP7-209ENST00000564117 NCAPD3P42695 1498 aa12.19□□□□□ -0.46
USP7-209ENST00000564117 BAZ1AQ9NRL2 1556 aaPredicted RBP12.17□□□□□ -0.46
USP7-209ENST00000564117 ATAD2BQ9ULI0 1458 aa12.12□□□□□ -0.47
USP7-209ENST00000564117 RIMBP3CA6NJZ7 1639 aa12.09□□□□□ -0.47
USP7-209ENST00000564117 RIMBP3BA6NNM3 1639 aa12.09□□□□□ -0.47
USP7-209ENST00000564117 RIMBP3Q9UFD9 1639 aa12.09□□□□□ -0.47
USP7-209ENST00000564117 LAMC3Q9Y6N6 1575 aa12.06□□□□□ -0.48
USP7-209ENST00000564117 HMGXB3Q12766 1538 aa12.06□□□□□ -0.48
USP7-209ENST00000564117 OSCARQ8IYS5 282 aa12.04□□□□□ -0.48
USP7-209ENST00000564117 TRHP20396 242 aaPredicted RBP11.99□□□□□ -0.49
USP7-209ENST00000564117 SMARCA4P51532 1647 aa11.97□□□□□ -0.49
USP7-209ENST00000564117 PDS5BQ9NTI5 1447 aa11.97□□□□□ -0.49
USP7-209ENST00000564117 MRC2Q9UBG0 1479 aa11.96□□□□□ -0.49
USP7-209ENST00000564117 BAZ1BQ9UIG0 1483 aaKnown RBP11.96□□□□□ -0.49
USP7-209ENST00000564117 WDR62O43379 1518 aa11.96□□□□□ -0.5
USP7-209ENST00000564117 ARHGEF11O15085 1522 aa11.93□□□□□ -0.5
USP7-209ENST00000564117 CYB5RLQ6IPT4 315 aa11.89□□□□□ -0.51
USP7-209ENST00000564117 PHF23Q9BUL5 403 aaPredicted RBP11.82□□□□□ -0.52
USP7-209ENST00000564117 CADPSQ9ULU8 1353 aa11.8□□□□□ -0.52
USP7-209ENST00000564117 CEP164Q9UPV0 1460 aa11.79□□□□□ -0.52
USP7-209ENST00000564117 ARAP1Q96P48 1450 aa11.78□□□□□ -0.52
USP7-209ENST00000564117 PEG3Q9GZU2 1588 aa11.77□□□□□ -0.53
USP7-209ENST00000564117 ILDR1Q86SU0 546 aaPredicted RBP11.76□□□□□ -0.53
USP7-209ENST00000564117 FANCD2Q9BXW9 1451 aa11.73□□□□□ -0.53
USP7-209ENST00000564117 MROH2BQ7Z745 1585 aa11.71□□□□□ -0.53
USP7-209ENST00000564117 URB2Q14146 1524 aaKnown RBP11.71□□□□□ -0.53
USP7-209ENST00000564117 ZNF608Q9ULD9 1512 aaPredicted RBP11.7□□□□□ -0.54
USP7-209ENST00000564117 CHD1O14646 1710 aa11.69□□□□□ -0.54
USP7-209ENST00000564117 EIF4G3O43432 1585 aaKnown RBP11.59□□□□□ -0.55
USP7-209ENST00000564117 WIZO95785 1651 aa11.58□□□□□ -0.56
USP7-209ENST00000564117 FBLN2P98095 1184 aa11.56□□□□□ -0.56
USP7-209ENST00000564117 RSF1Q96T23 1441 aaPredicted RBP11.54□□□□□ -0.56
USP7-209ENST00000564117 IFT140Q96RY7 1462 aa11.54□□□□□ -0.56
USP7-209ENST00000564117 CFTRP13569 1480 aa11.53□□□□□ -0.56
USP7-209ENST00000564117 AQRO60306 1485 aaKnown RBP eCLIP11.51□□□□□ -0.571e-7■■■■■ 39.8
USP7-209ENST00000564117 PRDM2Q13029 1718 aa11.46□□□□□ -0.58
USP7-209ENST00000564117 CLASP1Q7Z460 1538 aa11.45□□□□□ -0.58
USP7-209ENST00000564117 TOPBP1Q92547 1522 aa11.44□□□□□ -0.58
USP7-209ENST00000564117 TARBP1Q13395 1621 aaKnown RBP11.42□□□□□ -0.58
USP7-209ENST00000564117 KDM4FA0A1W2PPD8 638 aa11.4□□□□□ -0.58
USP7-209ENST00000564117 KIF13AQ9H1H9 1805 aa11.39□□□□□ -0.59
USP7-209ENST00000564117 GAPVD1Q14C86 1478 aa11.37□□□□□ -0.59
USP7-209ENST00000564117 SNAPC4Q5SXM2 1469 aa11.35□□□□□ -0.59
USP7-209ENST00000564117 SYNJ1O43426 1573 aa11.35□□□□□ -0.59
USP7-209ENST00000564117 ERCC6L2Q5T890 1561 aa11.33□□□□□ -0.6
USP7-209ENST00000564117 DNMBPQ6XZF7 1577 aa11.33□□□□□ -0.6
USP7-209ENST00000564117 RAD54L2Q9Y4B4 1467 aa11.31□□□□□ -0.6
USP7-209ENST00000564117 TDRD9Q8NDG6 1382 aaKnown RBP11.3□□□□□ -0.6
USP7-209ENST00000564117 CHMP7Q8WUX9 453 aaPredicted RBP11.29□□□□□ -0.6
USP7-209ENST00000564117 POLA1P09884 1462 aaPredicted RBP11.28□□□□□ -0.6
USP7-209ENST00000564117 TOP2AP11388 1531 aaKnown RBP11.28□□□□□ -0.6
USP7-209ENST00000564117 ABCC8Q09428 1581 aa11.24□□□□□ -0.61
USP7-209ENST00000564117 HECW2Q9P2P5 1572 aa11.24□□□□□ -0.61
USP7-209ENST00000564117 KDM6BO15054 1643 aa11.2□□□□□ -0.62
USP7-209ENST00000564117 TSPOAP1O95153 1857 aa11.2□□□□□ -0.62
USP7-209ENST00000564117 CCDC88BA6NC98 1476 aa11.19□□□□□ -0.62
USP7-209ENST00000564117 MAGI1Q96QZ7 1491 aaPredicted RBP11.19□□□□□ -0.62
USP7-209ENST00000564117 SOGA1O94964 1423 aa11.19□□□□□ -0.62
USP7-209ENST00000564117 SYNJ2O15056 1496 aa11.19□□□□□ -0.62
USP7-209ENST00000564117 PLPPR3Q6T4P5 718 aa11.18□□□□□ -0.62
USP7-209ENST00000564117 PBRM1Q86U86 1689 aa11.17□□□□□ -0.62
USP7-209ENST00000564117 FAM69CQ0P6D2 419 aa11.17□□□□□ -0.62
USP7-209ENST00000564117 CEP170Q5SW79 1584 aa11.16□□□□□ -0.62
USP7-209ENST00000564117 GRIN2BQ13224 1484 aa11.15□□□□□ -0.62
USP7-209ENST00000564117 ADGRL1O94910 1474 aa11.14□□□□□ -0.63
USP7-209ENST00000564117 FBXO41Q8TF61 875 aa11.14□□□□□ -0.63
USP7-209ENST00000564117 FGD5Q6ZNL6 1462 aa11.12□□□□□ -0.63
USP7-209ENST00000564117 DIP2BQ9P265 1576 aa11.12□□□□□ -0.63
USP7-209ENST00000564117 WDR97A6NE52 1622 aa11.11□□□□□ -0.63
USP7-209ENST00000564117 ABCC10Q5T3U5 1492 aa11.11□□□□□ -0.63
USP7-209ENST00000564117 LMTK3Q96Q04 1460 aa11.11□□□□□ -0.63
USP7-209ENST00000564117 SENP3Q9H4L4 574 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms