Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 YAL019W-AYAL019W-A 570 nt5.56□□□□□ -1.52
SSU72P53538 APN1YKL114C 1104 nt5.56□□□□□ -1.52
SSU72P53538 APE4YHR113W 1473 nt5.56□□□□□ -1.52
SSU72P53538 NAF1YNL124W 1479 nt5.56□□□□□ -1.52
SSU72P53538 ALT1YLR089C 1779 nt5.55□□□□□ -1.52
SSU72P53538 YFL013W-AYFL013W-A 804 nt5.55□□□□□ -1.52
SSU72P53538 GCN3YKR026C 918 nt5.55□□□□□ -1.52
SSU72P53538 SPG5YMR191W 1122 nt5.55□□□□□ -1.52
SSU72P53538 SEC17YBL050W 879 nt5.55□□□□□ -1.52
SSU72P53538 CCT3YJL014W 1605 nt5.55□□□□□ -1.52
SSU72P53538 YPR204WYPR204W 3099 nt5.54□□□□□ -1.52
SSU72P53538 YDL177CYDL177C 513 nt5.54□□□□□ -1.52
SSU72P53538 MRPL19YNL185C 477 nt5.54□□□□□ -1.52
SSU72P53538 snR30snR30 606 nt5.54□□□□□ -1.52
SSU72P53538 UME1YPL139C 1383 nt5.54□□□□□ -1.52
SSU72P53538 VBA1YMR088C 1689 nt5.53□□□□□ -1.52
SSU72P53538 STE13YOR219C 2796 nt5.53□□□□□ -1.52
SSU72P53538 PPH22YDL188C 1134 nt5.53□□□□□ -1.52
SSU72P53538 COX20YDR231C 618 nt5.53□□□□□ -1.52
SSU72P53538 NCS6YGL211W 1080 nt5.53□□□□□ -1.52
SSU72P53538 PUP2YGR253C 783 nt5.53□□□□□ -1.52
SSU72P53538 MED6YHR058C 888 nt5.53□□□□□ -1.52
SSU72P53538 REC107YJR021C 945 nt5.53□□□□□ -1.52
SSU72P53538 RHO4YKR055W 876 nt5.53□□□□□ -1.52
SSU72P53538 YLR162WYLR162W 357 nt5.53□□□□□ -1.52
SSU72P53538 YNR014WYNR014W 639 nt5.53□□□□□ -1.52
SSU72P53538 NME1NME1 340 nt5.53□□□□□ -1.52
SSU72P53538 YCL049CYCL049C 939 nt5.53□□□□□ -1.52
SSU72P53538 GSH1YJL101C 2037 nt5.52□□□□□ -1.53
SSU72P53538 LAT1YNL071W 1449 nt5.52□□□□□ -1.53
SSU72P53538 PPM1YDR435C 987 nt5.52□□□□□ -1.53
SSU72P53538 CUE4YML101C 354 nt5.52□□□□□ -1.53
SSU72P53538 MBF1YOR298C-A 456 nt5.52□□□□□ -1.53
SSU72P53538 CPA1YOR303W 1236 nt5.52□□□□□ -1.53
SSU72P53538 SUE1YPR151C 621 nt5.52□□□□□ -1.53
SSU72P53538 CCZ1YBR131W 2115 nt5.52□□□□□ -1.53
SSU72P53538 XBP1YIL101C 1944 nt5.52□□□□□ -1.53
SSU72P53538 SSK1YLR006C 2139 nt5.51□□□□□ -1.53
SSU72P53538 TRS31YDR472W 852 nt5.51□□□□□ -1.53
SSU72P53538 YGL102CYGL102C 429 nt5.51□□□□□ -1.53
SSU72P53538 VAM7YGL212W 951 nt5.51□□□□□ -1.53
SSU72P53538 YSC83YHR017W 1158 nt5.51□□□□□ -1.53
SSU72P53538 YLL056CYLL056C 897 nt5.51□□□□□ -1.53
SSU72P53538 TMA46YOR091W 1038 nt5.51□□□□□ -1.53
SSU72P53538 YOR268CYOR268C 399 nt5.51□□□□□ -1.53
SSU72P53538 PDB1YBR221C 1101 nt5.51□□□□□ -1.53
SSU72P53538 RBA50YDR527W 1320 nt5.5□□□□□ -1.53
SSU72P53538 YMR027WYMR027W 1413 nt5.5□□□□□ -1.53
SSU72P53538 HAS1YMR290C 1518 nt5.5□□□□□ -1.53
SSU72P53538 MRPS28YDR337W 861 nt5.5□□□□□ -1.53
SSU72P53538 URH1YDR400W 1023 nt5.5□□□□□ -1.53
SSU72P53538 AIM46YHR199C 933 nt5.5□□□□□ -1.53
SSU72P53538 ATG36YJL185C 882 nt5.5□□□□□ -1.53
SSU72P53538 RPL31BYLR406C 342 nt5.5□□□□□ -1.53
SSU72P53538 YOX1YML027W 1158 nt5.5□□□□□ -1.53
SSU72P53538 PRE5YMR314W 705 nt5.5□□□□□ -1.53
SSU72P53538 MRPL10YNL284C 969 nt5.5□□□□□ -1.53
SSU72P53538 TSR3YOR006C 942 nt5.5□□□□□ -1.53
SSU72P53538 SMX3YPR182W 261 nt5.5□□□□□ -1.53
SSU72P53538 RGD2YFL047W 2145 nt5.5□□□□□ -1.53
SSU72P53538 HIS1YER055C 894 nt5.49□□□□□ -1.53
SSU72P53538 PDA1YER178W 1263 nt5.49□□□□□ -1.53
SSU72P53538 SPG1YGR236C 288 nt5.49□□□□□ -1.53
SSU72P53538 YKR032WYKR032W 315 nt5.49□□□□□ -1.53
SSU72P53538 OPI8YKR035C 642 nt5.49□□□□□ -1.53
SSU72P53538 ESC8YOL017W 2145 nt5.49□□□□□ -1.53
SSU72P53538 OPT1YJL212C 2400 nt5.49□□□□□ -1.53
SSU72P53538 PPM2YOL141W 2088 nt5.49□□□□□ -1.53
SSU72P53538 YMR155WYMR155W 1644 nt5.48□□□□□ -1.53
SSU72P53538 YMR279CYMR279C 1623 nt5.48□□□□□ -1.53
SSU72P53538 ECM3YOR092W 1842 nt5.48□□□□□ -1.53
SSU72P53538 YJL144WYJL144W 315 nt5.48□□□□□ -1.53
SSU72P53538 SWD1YAR003W 1281 nt5.48□□□□□ -1.53
SSU72P53538 FIT2YOR382W 462 nt5.48□□□□□ -1.53
SSU72P53538 YPR076WYPR076W 375 nt5.48□□□□□ -1.53
SSU72P53538 GPH1YPR160W 2709 nt5.47□□□□□ -1.53
SSU72P53538 SIT1YEL065W 1887 nt5.47□□□□□ -1.53
SSU72P53538 FLC3YGL139W 2409 nt5.47□□□□□ -1.53
SSU72P53538 YJL163CYJL163C 1668 nt5.47□□□□□ -1.53
SSU72P53538 YGR176WYGR176W 348 nt5.47□□□□□ -1.53
SSU72P53538 CBR1YIL043C 855 nt5.47□□□□□ -1.53
SSU72P53538 PRI1YIR008C 1230 nt5.47□□□□□ -1.53
SSU72P53538 RPL5YPL131W 894 nt5.47□□□□□ -1.53
SSU72P53538 YHR020WYHR020W 2067 nt5.47□□□□□ -1.53
SSU72P53538 CYS3YAL012W 1185 nt5.46□□□□□ -1.54
SSU72P53538 YKL018C-AYKL018C-A 300 nt5.46□□□□□ -1.54
SSU72P53538 RPR1RPR1 369 nt5.46□□□□□ -1.54
SSU72P53538 KEL1YHR158C 3495 nt5.46□□□□□ -1.54
SSU72P53538 SCT1YBL011W 2280 nt5.46□□□□□ -1.54
SSU72P53538 SNU71YGR013W 1863 nt5.45□□□□□ -1.54
SSU72P53538 PEX31YGR004W 1389 nt5.45□□□□□ -1.54
SSU72P53538 BNA5YLR231C 1362 nt5.45□□□□□ -1.54
SSU72P53538 YDR415CYDR415C 1125 nt5.45□□□□□ -1.54
SSU72P53538 CIS3YJL158C 684 nt5.45□□□□□ -1.54
SSU72P53538 OAC1YKL120W 975 nt5.45□□□□□ -1.54
SSU72P53538 ADH5YBR145W 1056 nt5.45□□□□□ -1.54
SSU72P53538 RNR3YIL066C 2610 nt5.44□□□□□ -1.54
SSU72P53538 MFG1YDL233W 1377 nt5.44□□□□□ -1.54
SSU72P53538 ICP55YER078C 1536 nt5.44□□□□□ -1.54
SSU72P53538 PPR1YLR014C 2715 nt5.44□□□□□ -1.54
Retrieved 100 of 7,029 protein–RNA pairs in 28.3 ms