Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 tG(GCC)G2tG(GCC)G2 71 nt6.5□□□□□ -1.37
TDP1P38319 tG(GCC)J1tG(GCC)J1 71 nt6.5□□□□□ -1.37
TDP1P38319 SUF23tG(GCC)J2 71 nt6.5□□□□□ -1.37
TDP1P38319 tG(GCC)MtG(GCC)M 71 nt6.5□□□□□ -1.37
TDP1P38319 tG(GCC)O1tG(GCC)O1 71 nt6.5□□□□□ -1.37
TDP1P38319 SUF17tG(GCC)O2 71 nt6.5□□□□□ -1.37
TDP1P38319 tG(GCC)P1tG(GCC)P1 71 nt6.5□□□□□ -1.37
TDP1P38319 tG(GCC)P2tG(GCC)P2 71 nt6.5□□□□□ -1.37
TDP1P38319 YKR032WYKR032W 315 nt6.5□□□□□ -1.37
TDP1P38319 AVO2YMR068W 1281 nt6.5□□□□□ -1.37
TDP1P38319 PTH2YBL057C 627 nt6.5□□□□□ -1.37
TDP1P38319 ADH5YBR145W 1056 nt6.5□□□□□ -1.37
TDP1P38319 YMR034CYMR034C 1305 nt6.5□□□□□ -1.37
TDP1P38319 SPS22YCL048W 1392 nt6.49□□□□□ -1.37
TDP1P38319 YDR415CYDR415C 1125 nt6.49□□□□□ -1.37
TDP1P38319 CUE4YML101C 354 nt6.49□□□□□ -1.37
TDP1P38319 COX5AYNL052W 462 nt6.49□□□□□ -1.37
TDP1P38319 STT3YGL022W 2157 nt6.49□□□□□ -1.37
TDP1P38319 HEM1YDR232W 1647 nt6.49□□□□□ -1.37
TDP1P38319 PHO3YBR092C 1404 nt6.49□□□□□ -1.37
TDP1P38319 SIR2YDL042C 1689 nt6.49□□□□□ -1.37
TDP1P38319 YHR020WYHR020W 2067 nt6.48□□□□□ -1.37
TDP1P38319 AI3Q0060 1248 nt6.48□□□□□ -1.37
TDP1P38319 GTT3YEL017W 1014 nt6.48□□□□□ -1.37
TDP1P38319 YMR306C-AYMR306C-A 390 nt6.48□□□□□ -1.37
TDP1P38319 PMT3YOR321W 2262 nt6.48□□□□□ -1.37
TDP1P38319 CYC8YBR112C 2901 nt6.48□□□□□ -1.37
TDP1P38319 AVT4YNL101W 2142 nt6.47□□□□□ -1.37
TDP1P38319 CHS5YLR330W 2016 nt6.47□□□□□ -1.37
TDP1P38319 SUF5tG(CCC)O 72 nt6.47□□□□□ -1.37
TDP1P38319 PRI1YIR008C 1230 nt6.47□□□□□ -1.37
TDP1P38319 CYS3YAL012W 1185 nt6.47□□□□□ -1.37
TDP1P38319 MRS3YJL133W 945 nt6.47□□□□□ -1.37
TDP1P38319 URA1YKL216W 945 nt6.47□□□□□ -1.37
TDP1P38319 DFR1YOR236W 636 nt6.47□□□□□ -1.37
TDP1P38319 YPL168WYPL168W 1293 nt6.47□□□□□ -1.37
TDP1P38319 YBR113WYBR113W 483 nt6.47□□□□□ -1.37
TDP1P38319 MRPL36YBR122C 534 nt6.47□□□□□ -1.37
TDP1P38319 LAT1YNL071W 1449 nt6.47□□□□□ -1.37
TDP1P38319 PCL10YGL134W 1302 nt6.47□□□□□ -1.37
TDP1P38319 MPC1YGL080W 393 nt6.46□□□□□ -1.38
TDP1P38319 OCA1YNL099C 717 nt6.46□□□□□ -1.38
TDP1P38319 SES1YDR023W 1389 nt6.45□□□□□ -1.38
TDP1P38319 TFC6YDR362C 2019 nt6.45□□□□□ -1.38
TDP1P38319 YPT1YFL038C 621 nt6.45□□□□□ -1.38
TDP1P38319 HEM2YGL040C 1029 nt6.45□□□□□ -1.38
TDP1P38319 YOX1YML027W 1158 nt6.45□□□□□ -1.38
TDP1P38319 YNL200CYNL200C 741 nt6.45□□□□□ -1.38
TDP1P38319 SMX3YPR182W 261 nt6.45□□□□□ -1.38
TDP1P38319 YGL102CYGL102C 429 nt6.44□□□□□ -1.38
TDP1P38319 TRR2YHR106W 1029 nt6.44□□□□□ -1.38
TDP1P38319 YIR017W-AYIR017W-A 600 nt6.44□□□□□ -1.38
TDP1P38319 PRS4YBL068W 981 nt6.44□□□□□ -1.38
TDP1P38319 YNL234WYNL234W 1281 nt6.44□□□□□ -1.38
TDP1P38319 SEC62YPL094C 825 nt6.44□□□□□ -1.38
TDP1P38319 SKI2YLR398C 3864 nt6.44□□□□□ -1.38
TDP1P38319 MIA40YKL195W 1212 nt6.43□□□□□ -1.38
TDP1P38319 ICP55YER078C 1536 nt6.43□□□□□ -1.38
TDP1P38319 CMR1YDL156W 1569 nt6.43□□□□□ -1.38
TDP1P38319 FBA1YKL060C 1080 nt6.42□□□□□ -1.38
TDP1P38319 TAF4YMR005W 1167 nt6.42□□□□□ -1.38
TDP1P38319 CST26YBR042C 1194 nt6.42□□□□□ -1.38
TDP1P38319 RGT2YDL138W 2292 nt6.42□□□□□ -1.38
TDP1P38319 POP1YNL221C 2628 nt6.41□□□□□ -1.38
TDP1P38319 TMA46YOR091W 1038 nt6.41□□□□□ -1.38
TDP1P38319 PPM2YOL141W 2088 nt6.41□□□□□ -1.38
TDP1P38319 YFL052WYFL052W 1398 nt6.41□□□□□ -1.38
TDP1P38319 MSC3YLR219W 2187 nt6.41□□□□□ -1.38
TDP1P38319 COQ1YBR003W 1422 nt6.41□□□□□ -1.38
TDP1P38319 EFT2YDR385W 2529 nt6.4□□□□□ -1.38
TDP1P38319 EFT1YOR133W 2529 nt6.4□□□□□ -1.38
TDP1P38319 EDE1YBL047C 4146 nt6.4□□□□□ -1.38
TDP1P38319 DOT1YDR440W 1749 nt6.4□□□□□ -1.38
TDP1P38319 MMS21YEL019C 804 nt6.4□□□□□ -1.38
TDP1P38319 AIM33YML087C 939 nt6.4□□□□□ -1.38
TDP1P38319 YPR150WYPR150W 522 nt6.4□□□□□ -1.38
TDP1P38319 YUR1YJL139C 1287 nt6.39□□□□□ -1.39
TDP1P38319 THI2YBR240C 1353 nt6.39□□□□□ -1.39
TDP1P38319 UTR2YEL040W 1404 nt6.39□□□□□ -1.39
TDP1P38319 CEF1YMR213W 1773 nt6.39□□□□□ -1.39
TDP1P38319 SLX5YDL013W 1860 nt6.39□□□□□ -1.39
TDP1P38319 HED1YDR014W-A 489 nt6.38□□□□□ -1.39
TDP1P38319 HGH1YGR187C 1185 nt6.38□□□□□ -1.39
TDP1P38319 SQT1YIR012W 1296 nt6.38□□□□□ -1.39
TDP1P38319 YLR162WYLR162W 357 nt6.38□□□□□ -1.39
TDP1P38319 YLR312CYLR312C 1197 nt6.38□□□□□ -1.39
TDP1P38319 COA2YPL189C-A 207 nt6.38□□□□□ -1.39
TDP1P38319 NUP49YGL172W 1419 nt6.38□□□□□ -1.39
TDP1P38319 HXK2YGL253W 1461 nt6.38□□□□□ -1.39
TDP1P38319 GAT1YFL021W 1533 nt6.38□□□□□ -1.39
TDP1P38319 OPT1YJL212C 2400 nt6.38□□□□□ -1.39
TDP1P38319 LAG2YOL025W 1983 nt6.37□□□□□ -1.39
TDP1P38319 MSY1YPL097W 1479 nt6.37□□□□□ -1.39
TDP1P38319 ISC1YER019W 1434 nt6.37□□□□□ -1.39
TDP1P38319 RRP1YDR087C 837 nt6.37□□□□□ -1.39
TDP1P38319 AIM46YHR199C 933 nt6.37□□□□□ -1.39
TDP1P38319 DID2YKR035W-A 615 nt6.37□□□□□ -1.39
TDP1P38319 SWD1YAR003W 1281 nt6.37□□□□□ -1.39
TDP1P38319 CWC25YNL245C 540 nt6.37□□□□□ -1.39
TDP1P38319 NDJ1YOL104C 1059 nt6.37□□□□□ -1.39
Retrieved 100 of 7,029 protein–RNA pairs in 70.7 ms