Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 DIA1YMR316W 1011 nt7.59□□□□□ -1.19
MSH3P25336 MBF1YOR298C-A 456 nt7.59□□□□□ -1.19
MSH3P25336 APM4YOL062C 1476 nt7.59□□□□□ -1.19
MSH3P25336 DAL7YIR031C 1665 nt7.59□□□□□ -1.19
MSH3P25336 DML1YMR211W 1428 nt7.59□□□□□ -1.19
MSH3P25336 MUM3YOR298W 1440 nt7.59□□□□□ -1.19
MSH3P25336 BRN1YBL097W 2265 nt7.58□□□□□ -1.2
MSH3P25336 STD1YOR047C 1335 nt7.58□□□□□ -1.2
MSH3P25336 NAF1YNL124W 1479 nt7.58□□□□□ -1.2
MSH3P25336 YKR075CYKR075C 924 nt7.58□□□□□ -1.2
MSH3P25336 YNL200CYNL200C 741 nt7.58□□□□□ -1.2
MSH3P25336 GET4YOR164C 939 nt7.58□□□□□ -1.2
MSH3P25336 HBN1YCL026C-B 582 nt7.58□□□□□ -1.2
MSH3P25336 FCY22YER060W-A 1593 nt7.58□□□□□ -1.2
MSH3P25336 DAL4YIR028W 1908 nt7.58□□□□□ -1.2
MSH3P25336 ENP1YBR247C 1452 nt7.57□□□□□ -1.2
MSH3P25336 PDA1YER178W 1263 nt7.57□□□□□ -1.2
MSH3P25336 ADD66YKL206C 804 nt7.57□□□□□ -1.2
MSH3P25336 OMA1YKR087C 1038 nt7.57□□□□□ -1.2
MSH3P25336 ALG5YPL227C 1005 nt7.57□□□□□ -1.2
MSH3P25336 YEN1YER041W 2280 nt7.56□□□□□ -1.2
MSH3P25336 YCR006CYCR006C 474 nt7.56□□□□□ -1.2
MSH3P25336 ERP2YAL007C 648 nt7.56□□□□□ -1.2
MSH3P25336 NEJ1YLR265C 1029 nt7.56□□□□□ -1.2
MSH3P25336 MTQ1YNL063W 945 nt7.56□□□□□ -1.2
MSH3P25336 PRP40YKL012W 1752 nt7.56□□□□□ -1.2
MSH3P25336 YLL066CYLL066C 3618 nt7.56□□□□□ -1.2
MSH3P25336 TRS31YDR472W 852 nt7.55□□□□□ -1.2
MSH3P25336 YNL194CYNL194C 906 nt7.55□□□□□ -1.2
MSH3P25336 TSR3YOR006C 942 nt7.55□□□□□ -1.2
MSH3P25336 YOR300WYOR300W 309 nt7.55□□□□□ -1.2
MSH3P25336 EFT2YDR385W 2529 nt7.55□□□□□ -1.2
MSH3P25336 EFT1YOR133W 2529 nt7.55□□□□□ -1.2
MSH3P25336 YBR241CYBR241C 1467 nt7.55□□□□□ -1.2
MSH3P25336 CDC16YKL022C 2523 nt7.54□□□□□ -1.2
MSH3P25336 CIR2YOR356W 1896 nt7.54□□□□□ -1.2
MSH3P25336 CTF8YHR191C 402 nt7.54□□□□□ -1.2
MSH3P25336 YOL099CYOL099C 492 nt7.54□□□□□ -1.2
MSH3P25336 snR30snR30 606 nt7.54□□□□□ -1.2
MSH3P25336 TUF1YOR187W 1314 nt7.53□□□□□ -1.2
MSH3P25336 BDF2YDL070W 1917 nt7.53□□□□□ -1.2
MSH3P25336 snR57snR57 88 nt7.53□□□□□ -1.2
MSH3P25336 YGR291CYGR291C 222 nt7.53□□□□□ -1.2
MSH3P25336 CYS3YAL012W 1185 nt7.53□□□□□ -1.2
MSH3P25336 NTG2YOL043C 1143 nt7.53□□□□□ -1.2
MSH3P25336 RRP40YOL142W 723 nt7.53□□□□□ -1.2
MSH3P25336 YBR298C-AYBR298C-A 222 nt7.53□□□□□ -1.2
MSH3P25336 YCL049CYCL049C 939 nt7.53□□□□□ -1.2
MSH3P25336 PAC2YER007W 1557 nt7.53□□□□□ -1.2
MSH3P25336 CEF1YMR213W 1773 nt7.53□□□□□ -1.2
MSH3P25336 NEM1YHR004C 1341 nt7.52□□□□□ -1.2
MSH3P25336 HOG1YLR113W 1308 nt7.52□□□□□ -1.2
MSH3P25336 CLB4YLR210W 1383 nt7.52□□□□□ -1.21
MSH3P25336 TRR2YHR106W 1029 nt7.52□□□□□ -1.21
MSH3P25336 VPS28YPL065W 729 nt7.52□□□□□ -1.21
MSH3P25336 CIA1YDR267C 993 nt7.51□□□□□ -1.21
MSH3P25336 BIM1YER016W 1035 nt7.51□□□□□ -1.21
MSH3P25336 PRS4YBL068W 981 nt7.51□□□□□ -1.21
MSH3P25336 YNR014WYNR014W 639 nt7.51□□□□□ -1.21
MSH3P25336 HTZ1YOL012C 405 nt7.51□□□□□ -1.21
MSH3P25336 MIP1YOR330C 3765 nt7.51□□□□□ -1.21
MSH3P25336 RGD2YFL047W 2145 nt7.51□□□□□ -1.21
MSH3P25336 LAG2YOL025W 1983 nt7.5□□□□□ -1.21
MSH3P25336 BUD9YGR041W 1644 nt7.5□□□□□ -1.21
MSH3P25336 RTN1YDR233C 888 nt7.5□□□□□ -1.21
MSH3P25336 RPL2BYIL018W 765 nt7.5□□□□□ -1.21
MSH3P25336 REC107YJR021C 945 nt7.5□□□□□ -1.21
MSH3P25336 RDN5-2RDN5-2 119 nt7.5□□□□□ -1.21
MSH3P25336 RDN5-3RDN5-3 119 nt7.5□□□□□ -1.21
MSH3P25336 RDN5-4RDN5-4 119 nt7.5□□□□□ -1.21
MSH3P25336 RDN5-5RDN5-5 119 nt7.5□□□□□ -1.21
MSH3P25336 SPG5YMR191W 1122 nt7.5□□□□□ -1.21
MSH3P25336 YNR005CYNR005C 405 nt7.5□□□□□ -1.21
MSH3P25336 CST26YBR042C 1194 nt7.5□□□□□ -1.21
MSH3P25336 RKM4YDR257C 1485 nt7.49□□□□□ -1.21
MSH3P25336 APE4YHR113W 1473 nt7.49□□□□□ -1.21
MSH3P25336 YPL245WYPL245W 1365 nt7.49□□□□□ -1.21
MSH3P25336 PUP2YGR253C 783 nt7.49□□□□□ -1.21
MSH3P25336 MHO1YJR008W 1017 nt7.49□□□□□ -1.21
MSH3P25336 MSO1YNR049C 633 nt7.49□□□□□ -1.21
MSH3P25336 VAM3YOR106W 852 nt7.49□□□□□ -1.21
MSH3P25336 HEM15YOR176W 1182 nt7.49□□□□□ -1.21
MSH3P25336 POP1YNL221C 2628 nt7.48□□□□□ -1.21
MSH3P25336 HER2YMR293C 1395 nt7.48□□□□□ -1.21
MSH3P25336 YGR066CYGR066C 879 nt7.48□□□□□ -1.21
MSH3P25336 SPO12YHR152W 522 nt7.48□□□□□ -1.21
MSH3P25336 RAP1YNL216W 2484 nt7.47□□□□□ -1.21
MSH3P25336 RAM1YDL090C 1296 nt7.47□□□□□ -1.21
MSH3P25336 PPH22YDL188C 1134 nt7.47□□□□□ -1.21
MSH3P25336 MRPS28YDR337W 861 nt7.47□□□□□ -1.21
MSH3P25336 YAL019W-AYAL019W-A 570 nt7.47□□□□□ -1.21
MSH3P25336 VTA1YLR181C 993 nt7.47□□□□□ -1.21
MSH3P25336 ISA2YPR067W 558 nt7.47□□□□□ -1.21
MSH3P25336 GLE1YDL207W 1617 nt7.46□□□□□ -1.21
MSH3P25336 SHO1YER118C 1104 nt7.46□□□□□ -1.22
MSH3P25336 YGL235WYGL235W 537 nt7.46□□□□□ -1.22
MSH3P25336 DPH5YLR172C 903 nt7.46□□□□□ -1.22
MSH3P25336 RUF21RUF21 707 nt7.46□□□□□ -1.22
MSH3P25336 ACS1YAL054C 2142 nt7.46□□□□□ -1.22
MSH3P25336 RPN5YDL147W 1338 nt7.46□□□□□ -1.22
Retrieved 100 of 7,029 protein–RNA pairs in 47.5 ms