Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 SPO7YAL009W 780 nt9.63□□□□□ -0.87
TY1B-HO13535 MRPS5YBR251W 924 nt9.63□□□□□ -0.87
TY1B-HO13535 CIN4YMR138W 576 nt9.63□□□□□ -0.87
TY1B-HO13535 IRC11YOR013W 471 nt9.63□□□□□ -0.87
TY1B-HO13535 SSO1YPL232W 873 nt9.63□□□□□ -0.87
TY1B-HO13535 ADE17YMR120C 1779 nt9.62□□□□□ -0.87
TY1B-HO13535 RDN5-2RDN5-2 119 nt9.62□□□□□ -0.87
TY1B-HO13535 RDN5-3RDN5-3 119 nt9.62□□□□□ -0.87
TY1B-HO13535 RDN5-4RDN5-4 119 nt9.62□□□□□ -0.87
TY1B-HO13535 RDN5-5RDN5-5 119 nt9.62□□□□□ -0.87
TY1B-HO13535 FRE5YOR384W 2085 nt9.6□□□□□ -0.87
TY1B-HO13535 YTP1YNL237W 1380 nt9.6□□□□□ -0.87
TY1B-HO13535 SEC13YLR208W 894 nt9.6□□□□□ -0.87
TY1B-HO13535 SNF4YGL115W 969 nt9.59□□□□□ -0.87
TY1B-HO13535 DAL3YIR032C 588 nt9.59□□□□□ -0.87
TY1B-HO13535 HEM1YDR232W 1647 nt9.59□□□□□ -0.87
TY1B-HO13535 PYK2YOR347C 1521 nt9.58□□□□□ -0.88
TY1B-HO13535 QCR6YFR033C 444 nt9.58□□□□□ -0.88
TY1B-HO13535 PNP1YLR209C 936 nt9.58□□□□□ -0.88
TY1B-HO13535 AAD15YOL165C 432 nt9.58□□□□□ -0.88
TY1B-HO13535 YPL250W-AYPL250W-A 288 nt9.58□□□□□ -0.88
TY1B-HO13535 RIX7YLL034C 2514 nt9.58□□□□□ -0.88
TY1B-HO13535 PKC1YBL105C 3456 nt9.58□□□□□ -0.88
TY1B-HO13535 MET30YIL046W 1923 nt9.58□□□□□ -0.88
TY1B-HO13535 YEL023CYEL023C 2049 nt9.57□□□□□ -0.88
TY1B-HO13535 TPO3YPR156C 1869 nt9.57□□□□□ -0.88
TY1B-HO13535 MSY1YPL097W 1479 nt9.57□□□□□ -0.88
TY1B-HO13535 MTR3YGR158C 753 nt9.57□□□□□ -0.88
TY1B-HO13535 EFM4YIL064W 774 nt9.57□□□□□ -0.88
TY1B-HO13535 ECM31YBR176W 939 nt9.57□□□□□ -0.88
TY1B-HO13535 PXL1YKR090W 2121 nt9.56□□□□□ -0.88
TY1B-HO13535 YLR312CYLR312C 1197 nt9.56□□□□□ -0.88
TY1B-HO13535 YGL036WYGL036W 2730 nt9.56□□□□□ -0.88
TY1B-HO13535 YDL057WYDL057W 987 nt9.55□□□□□ -0.88
TY1B-HO13535 YDL129WYDL129W 876 nt9.55□□□□□ -0.88
TY1B-HO13535 PHB1YGR132C 864 nt9.55□□□□□ -0.88
TY1B-HO13535 YPL264CYPL264C 1062 nt9.55□□□□□ -0.88
TY1B-HO13535 UGX2YDL169C 672 nt9.55□□□□□ -0.88
TY1B-HO13535 MRPL22YNL177C 930 nt9.55□□□□□ -0.88
TY1B-HO13535 ATG12YBR217W 561 nt9.55□□□□□ -0.88
TY1B-HO13535 MEX67YPL169C 1800 nt9.54□□□□□ -0.88
TY1B-HO13535 YGR022CYGR022C 330 nt9.54□□□□□ -0.88
TY1B-HO13535 LST8YNL006W 912 nt9.54□□□□□ -0.88
TY1B-HO13535 MRK1YDL079C 1506 nt9.54□□□□□ -0.88
TY1B-HO13535 YLR112WYLR112W 420 nt9.53□□□□□ -0.88
TY1B-HO13535 AFG1YEL052W 1530 nt9.53□□□□□ -0.88
TY1B-HO13535 GNP1YDR508C 1992 nt9.53□□□□□ -0.88
TY1B-HO13535 YDR034W-BYDR034W-B 156 nt9.52□□□□□ -0.88
TY1B-HO13535 DYS1YHR068W 1164 nt9.52□□□□□ -0.88
TY1B-HO13535 COR1YBL045C 1374 nt9.52□□□□□ -0.88
TY1B-HO13535 YCR041WYCR041W 333 nt9.52□□□□□ -0.89
TY1B-HO13535 PUF3YLL013C 2640 nt9.51□□□□□ -0.89
TY1B-HO13535 HXT9YJL219W 1704 nt9.51□□□□□ -0.89
TY1B-HO13535 MEH1YKR007W 555 nt9.51□□□□□ -0.89
TY1B-HO13535 SNO4YMR322C 714 nt9.5□□□□□ -0.89
TY1B-HO13535 YNL120CYNL120C 486 nt9.5□□□□□ -0.89
TY1B-HO13535 HSP33YOR391C 714 nt9.5□□□□□ -0.89
TY1B-HO13535 HSP32YPL280W 714 nt9.5□□□□□ -0.89
TY1B-HO13535 LOT6YLR011W 576 nt9.5□□□□□ -0.89
TY1B-HO13535 YLR283WYLR283W 945 nt9.5□□□□□ -0.89
TY1B-HO13535 RRS1YOR294W 612 nt9.5□□□□□ -0.89
TY1B-HO13535 YLR194CYLR194C 765 nt9.49□□□□□ -0.89
TY1B-HO13535 MHP1YJL042W 4197 nt9.48□□□□□ -0.89
TY1B-HO13535 TOK1YJL093C 2076 nt9.48□□□□□ -0.89
TY1B-HO13535 TEA1YOR337W 2280 nt9.47□□□□□ -0.89
TY1B-HO13535 GEF1YJR040W 2340 nt9.47□□□□□ -0.89
TY1B-HO13535 ERS1YCR075C 783 nt9.47□□□□□ -0.89
TY1B-HO13535 CCT3YJL014W 1605 nt9.46□□□□□ -0.89
TY1B-HO13535 EXG1YLR300W 1347 nt9.46□□□□□ -0.89
TY1B-HO13535 RGD2YFL047W 2145 nt9.46□□□□□ -0.9
TY1B-HO13535 YJL045WYJL045W 1905 nt9.46□□□□□ -0.9
TY1B-HO13535 NUP84YDL116W 2181 nt9.45□□□□□ -0.9
TY1B-HO13535 ALD5YER073W 1563 nt9.44□□□□□ -0.9
TY1B-HO13535 ASK1YKL052C 879 nt9.44□□□□□ -0.9
TY1B-HO13535 AIM2YAL049C 741 nt9.44□□□□□ -0.9
TY1B-HO13535 DCN1YLR128W 810 nt9.44□□□□□ -0.9
TY1B-HO13535 YNR075C-AYNR075C-A 93 nt9.44□□□□□ -0.9
TY1B-HO13535 GPB2YAL056W 2643 nt9.43□□□□□ -0.9
TY1B-HO13535 TOD6YBL054W 1578 nt9.43□□□□□ -0.9
TY1B-HO13535 RKI1YOR095C 777 nt9.42□□□□□ -0.9
TY1B-HO13535 HBN1YCL026C-B 582 nt9.42□□□□□ -0.9
TY1B-HO13535 YCK1YHR135C 1617 nt9.42□□□□□ -0.9
TY1B-HO13535 VID30YGL227W 2877 nt9.41□□□□□ -0.9
TY1B-HO13535 DAP1YPL170W 459 nt9.41□□□□□ -0.9
TY1B-HO13535 IME2YJL106W 1938 nt9.41□□□□□ -0.9
TY1B-HO13535 YCR047W-AYCR047W-A 207 nt9.4□□□□□ -0.9
TY1B-HO13535 RRP45YDR280W 918 nt9.4□□□□□ -0.9
TY1B-HO13535 SYN8YAL014C 768 nt9.4□□□□□ -0.9
TY1B-HO13535 BRL1YHR036W 1416 nt9.4□□□□□ -0.91
TY1B-HO13535 tR(ACG)JtR(ACG)J 73 nt9.4□□□□□ -0.91
TY1B-HO13535 VMA16YHR026W 642 nt9.4□□□□□ -0.91
TY1B-HO13535 FBA1YKL060C 1080 nt9.4□□□□□ -0.91
TY1B-HO13535 NPP1YCR026C 2229 nt9.39□□□□□ -0.91
TY1B-HO13535 YOR012WYOR012W 414 nt9.39□□□□□ -0.91
TY1B-HO13535 SQT1YIR012W 1296 nt9.38□□□□□ -0.91
TY1B-HO13535 PEX31YGR004W 1389 nt9.38□□□□□ -0.91
TY1B-HO13535 ADE13YLR359W 1449 nt9.38□□□□□ -0.91
TY1B-HO13535 YPT1YFL038C 621 nt9.37□□□□□ -0.91
TY1B-HO13535 MIA40YKL195W 1212 nt9.37□□□□□ -0.91
TY1B-HO13535 MRPL13YKR006C 795 nt9.37□□□□□ -0.91
Retrieved 100 of 7,029 protein–RNA pairs in 43.8 ms