Protein–RNA interactions for Protein: A6NJ08

MBD3L5, Putative methyl-CpG-binding domain protein 3-like 5, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L5A6NJ08 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.68■■□□□ 1.06
MBD3L5A6NJ08 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.68■■□□□ 1.06
MBD3L5A6NJ08 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MBD3L5A6NJ08 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MBD3L5A6NJ08 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MBD3L5A6NJ08 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
MBD3L5A6NJ08 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
MBD3L5A6NJ08 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
MBD3L5A6NJ08 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
MBD3L5A6NJ08 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MBD3L5A6NJ08 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MBD3L5A6NJ08 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MBD3L5A6NJ08 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MBD3L5A6NJ08 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MBD3L5A6NJ08 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.66■■□□□ 1.06
MBD3L5A6NJ08 AC010980.1-201ENST00000587192 1142 ntBASIC21.66■■□□□ 1.06
MBD3L5A6NJ08 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.66■■□□□ 1.06
MBD3L5A6NJ08 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
MBD3L5A6NJ08 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
MBD3L5A6NJ08 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.65■■□□□ 1.06
MBD3L5A6NJ08 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.65■■□□□ 1.06
MBD3L5A6NJ08 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.64■■□□□ 1.06
MBD3L5A6NJ08 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
MBD3L5A6NJ08 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.64■■□□□ 1.05
MBD3L5A6NJ08 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.64■■□□□ 1.05
MBD3L5A6NJ08 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
MBD3L5A6NJ08 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.05
MBD3L5A6NJ08 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
MBD3L5A6NJ08 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MBD3L5A6NJ08 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MBD3L5A6NJ08 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MBD3L5A6NJ08 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.63■■□□□ 1.05
MBD3L5A6NJ08 AC142086.6-201ENST00000621154 1765 ntBASIC21.62■■□□□ 1.05
MBD3L5A6NJ08 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
MBD3L5A6NJ08 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
MBD3L5A6NJ08 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
MBD3L5A6NJ08 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
MBD3L5A6NJ08 AC142472.1-201ENST00000612013 1741 ntBASIC21.61■■□□□ 1.05
MBD3L5A6NJ08 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.61■■□□□ 1.05
MBD3L5A6NJ08 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MBD3L5A6NJ08 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.61■■□□□ 1.05
MBD3L5A6NJ08 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
MBD3L5A6NJ08 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MBD3L5A6NJ08 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
MBD3L5A6NJ08 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MBD3L5A6NJ08 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
MBD3L5A6NJ08 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
MBD3L5A6NJ08 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
MBD3L5A6NJ08 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
MBD3L5A6NJ08 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.59■■□□□ 1.05
MBD3L5A6NJ08 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
MBD3L5A6NJ08 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.59■■□□□ 1.05
MBD3L5A6NJ08 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.59■■□□□ 1.05
MBD3L5A6NJ08 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MBD3L5A6NJ08 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
MBD3L5A6NJ08 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MBD3L5A6NJ08 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
MBD3L5A6NJ08 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
MBD3L5A6NJ08 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.58■■□□□ 1.04
MBD3L5A6NJ08 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.58■■□□□ 1.04
MBD3L5A6NJ08 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
MBD3L5A6NJ08 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.57■■□□□ 1.04
MBD3L5A6NJ08 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
MBD3L5A6NJ08 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MBD3L5A6NJ08 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MBD3L5A6NJ08 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.57■■□□□ 1.04
MBD3L5A6NJ08 PVT1_1.1-201ENST00000615125 194 ntBASIC21.57■■□□□ 1.04
MBD3L5A6NJ08 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MBD3L5A6NJ08 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MBD3L5A6NJ08 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MBD3L5A6NJ08 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MBD3L5A6NJ08 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.56■■□□□ 1.04
MBD3L5A6NJ08 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MBD3L5A6NJ08 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MBD3L5A6NJ08 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.56■■□□□ 1.04
MBD3L5A6NJ08 AC087393.1-201ENST00000582896 145 ntBASIC21.56■■□□□ 1.04
MBD3L5A6NJ08 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.56■■□□□ 1.04
MBD3L5A6NJ08 KRT8P33-201ENST00000508125 1423 ntBASIC21.55■■□□□ 1.04
MBD3L5A6NJ08 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.55■■□□□ 1.04
MBD3L5A6NJ08 YBX1P4-201ENST00000392794 808 ntBASIC21.55■■□□□ 1.04
MBD3L5A6NJ08 AC103834.1-201ENST00000520383 144 ntBASIC21.55■■□□□ 1.04
MBD3L5A6NJ08 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MBD3L5A6NJ08 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MBD3L5A6NJ08 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
MBD3L5A6NJ08 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
MBD3L5A6NJ08 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MBD3L5A6NJ08 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MBD3L5A6NJ08 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
MBD3L5A6NJ08 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MBD3L5A6NJ08 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MBD3L5A6NJ08 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.54■■□□□ 1.04
MBD3L5A6NJ08 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MBD3L5A6NJ08 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.54■■□□□ 1.04
MBD3L5A6NJ08 MIR4508-201ENST00000584178 70 ntBASIC21.54■■□□□ 1.04
MBD3L5A6NJ08 AC019171.1-201ENST00000601251 1056 ntBASIC21.54■■□□□ 1.04
MBD3L5A6NJ08 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MBD3L5A6NJ08 AL451085.2-201ENST00000605085 799 ntBASIC21.54■■□□□ 1.04
MBD3L5A6NJ08 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MBD3L5A6NJ08 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MBD3L5A6NJ08 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms