Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.115e-6■□□□□ 9
SRSF1Q07955 MLLT6-207ENST00000618652 624 ntTSL 314.24□□□□□ -0.135e-6■□□□□ 9
SRSF1Q07955 STIP1-210ENST00000540887 877 ntTSL 214.03□□□□□ -0.165e-6■□□□□ 9
SRSF1Q07955 FADS3-206ENST00000527379 768 ntTSL 313.59□□□□□ -0.231e-9■□□□□ 9
SRSF1Q07955 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.47□□□□□ -0.251e-9■□□□□ 9
SRSF1Q07955 SAR1A-203ENST00000373239 468 ntTSL 313.43□□□□□ -0.265e-6■□□□□ 9
SRSF1Q07955 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.335e-6■□□□□ 9
SRSF1Q07955 HNRNPH1-246ENST00000523449 793 ntTSL 312.93□□□□□ -0.341e-9■□□□□ 9
SRSF1Q07955 WDR74-215ENST00000544831 814 ntTSL 212.84□□□□□ -0.355e-6■□□□□ 9
SRSF1Q07955 FADS3-203ENST00000525094 403 ntTSL 512.79□□□□□ -0.361e-9■□□□□ 9
SRSF1Q07955 ABCA7-216ENST00000532194 1151 ntTSL 312.68□□□□□ -0.385e-6■□□□□ 9
SRSF1Q07955 FADS3-211ENST00000533676 5314 ntTSL 211.96□□□□□ -0.51e-9■□□□□ 9
SRSF1Q07955 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.51e-9■□□□□ 9
SRSF1Q07955 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.55e-6■□□□□ 9
SRSF1Q07955 CCS-209ENST00000534763 777 ntTSL 211.89□□□□□ -0.515e-6■□□□□ 9
SRSF1Q07955 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.545e-6■□□□□ 9
SRSF1Q07955 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC11.43□□□□□ -0.585e-6■□□□□ 9
SRSF1Q07955 FADS3-208ENST00000529404 2379 ntTSL 211.4□□□□□ -0.581e-9■□□□□ 9
SRSF1Q07955 TSSC2-205ENST00000530366 382 ntTSL 211.18□□□□□ -0.625e-6■□□□□ 9
SRSF1Q07955 CCS-202ENST00000525435 798 ntTSL 211.13□□□□□ -0.635e-6■□□□□ 9
SRSF1Q07955 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.645e-6■□□□□ 9
SRSF1Q07955 PVT1-203ENST00000513868 1699 ntTSL 1 (best) BASIC10.55□□□□□ -0.725e-6■□□□□ 9
SRSF1Q07955 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC10.49□□□□□ -0.735e-6■□□□□ 9
SRSF1Q07955 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.745e-6■□□□□ 9
SRSF1Q07955 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC10.4□□□□□ -0.741e-9■□□□□ 9
SRSF1Q07955 GLUL-211ENST00000489818 683 ntTSL 310.16□□□□□ -0.785e-6■□□□□ 9
SRSF1Q07955 WDR74-214ENST00000543688 537 ntTSL 310.05□□□□□ -0.85e-6■□□□□ 9
SRSF1Q07955 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.825e-6■□□□□ 9
SRSF1Q07955 ARHGEF2-203ENST00000361247 4149 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.845e-6■□□□□ 9
SRSF1Q07955 CEP192-204ENST00000507064 706 ntTSL 39.71□□□□□ -0.865e-6■□□□□ 9
SRSF1Q07955 MTA2-205ENST00000531179 625 ntTSL 39.53□□□□□ -0.885e-6■□□□□ 9
SRSF1Q07955 MOV10-204ENST00000413052 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.896e-6■□□□□ 9
SRSF1Q07955 MOV10-203ENST00000369645 3552 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.946e-6■□□□□ 9
SRSF1Q07955 ARHGEF2-202ENST00000313695 4080 ntTSL 1 (best) BASIC9.14□□□□□ -0.955e-6■□□□□ 9
SRSF1Q07955 GLUL-207ENST00000463851 939 ntTSL 39.03□□□□□ -0.965e-6■□□□□ 9
SRSF1Q07955 GLUL-206ENST00000462444 793 ntTSL 28.96□□□□□ -0.985e-6■□□□□ 9
SRSF1Q07955 PUM1-221ENST00000530669 582 ntTSL 38.6□□□□□ -1.035e-6■□□□□ 9
SRSF1Q07955 HNRNPDL-201ENST00000295470 3781 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.061e-9■□□□□ 9
SRSF1Q07955 WTAP-202ENST00000358372 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.065e-6■□□□□ 9
SRSF1Q07955 HNRNPDL-204ENST00000507721 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.071e-9■□□□□ 9
SRSF1Q07955 GLUL-209ENST00000480604 908 ntTSL 58.03□□□□□ -1.125e-6■□□□□ 9
SRSF1Q07955 PVT1-213ENST00000522414 654 ntTSL 27.8□□□□□ -1.165e-6■□□□□ 9
SRSF1Q07955 MOV10-201ENST00000357443 3383 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.176e-6■□□□□ 9
SRSF1Q07955 SAR1A-205ENST00000373242 5981 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.25e-6■□□□□ 9
SRSF1Q07955 MOV10-217ENST00000496577 4312 ntTSL 27.44□□□□□ -1.226e-6■□□□□ 9
SRSF1Q07955 MOV10-202ENST00000369644 4100 ntTSL 1 (best) BASIC7.38□□□□□ -1.236e-6■□□□□ 9
SRSF1Q07955 MOV10-206ENST00000468624 4689 ntTSL 57.07□□□□□ -1.286e-6■□□□□ 9
SRSF1Q07955 PVT1-222ENST00000613916 137 nt6.9□□□□□ -1.35e-6■□□□□ 9
SRSF1Q07955 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.365e-6■□□□□ 9
SRSF1Q07955 PVT1-214ENST00000522875 922 ntTSL 5 BASIC5.96□□□□□ -1.465e-6■□□□□ 9
SRSF1Q07955 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC5.91□□□□□ -1.465e-6■□□□□ 9
SRSF1Q07955 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.475e-6■□□□□ 9
SRSF1Q07955 CEP192-214ENST00000589596 3793 ntAPPRIS ALT2 TSL 25.78□□□□□ -1.485e-6■□□□□ 9
SRSF1Q07955 GALNT12-202ENST00000470473 772 ntTSL 25.71□□□□□ -1.55e-6■□□□□ 9
SRSF1Q07955 PVT1-217ENST00000523190 443 ntTSL 35.64□□□□□ -1.515e-6■□□□□ 9
SRSF1Q07955 STIP1-202ENST00000355603 528 ntTSL 35.55□□□□□ -1.525e-6■□□□□ 9
SRSF1Q07955 ARHGEF2-214ENST00000477754 883 ntTSL 54.93□□□□□ -1.625e-6■□□□□ 9
SRSF1Q07955 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.91□□□□□ -1.625e-6■□□□□ 9
SRSF1Q07955 SAR1A-208ENST00000477464 529 ntTSL 24.69□□□□□ -1.665e-6■□□□□ 9
SRSF1Q07955 WTAP-204ENST00000494513 635 ntTSL 54.1□□□□□ -1.755e-6■□□□□ 9
SRSF1Q07955 PVT1-211ENST00000521600 408 ntTSL 24.03□□□□□ -1.765e-6■□□□□ 9
SRSF1Q07955 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC3.77□□□□□ -1.815e-6■□□□□ 9
SRSF1Q07955 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.71□□□□□ -1.815e-6■□□□□ 9
SRSF1Q07955 ZC3H15-201ENST00000337859 2138 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.237e-7■□□□□ 9
SRSF1Q07955 NAP1L1-217ENST00000549988 544 ntTSL 311.44□□□□□ -0.581e-24■□□□□ 9
SRSF1Q07955 VWCE-207ENST00000538579 581 ntTSL 217.85■□□□□ 0.455e-9■□□□□ 9
SRSF1Q07955 VWCE-204ENST00000535599 883 ntTSL 217.23■□□□□ 0.355e-9■□□□□ 9
SRSF1Q07955 SPCS3-204ENST00000513139 589 ntTSL 214.35□□□□□ -0.112e-14■□□□□ 9
SRSF1Q07955 TOX3-205ENST00000568436 548 ntTSL 319.37■□□□□ 0.691e-8■□□□□ 9
SRSF1Q07955 MSI2-210ENST00000579505 577 ntTSL 316.04■□□□□ 0.161e-8■□□□□ 9
SRSF1Q07955 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.46□□□□□ -0.091e-8■□□□□ 9
SRSF1Q07955 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.291e-8■□□□□ 9
SRSF1Q07955 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13□□□□□ -0.331e-8■□□□□ 9
SRSF1Q07955 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC11.19□□□□□ -0.621e-8■□□□□ 9
SRSF1Q07955 MSI2-208ENST00000579466 186 ntTSL 39.64□□□□□ -0.871e-8■□□□□ 9
SRSF1Q07955 AGRN-204ENST00000466223 459 ntTSL 214.32□□□□□ -0.121e-7■□□□□ 9
SRSF1Q07955 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.531e-7■□□□□ 9
SRSF1Q07955 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC11.63□□□□□ -0.551e-7■□□□□ 9
SRSF1Q07955 IST1-223ENST00000545518 710 ntTSL 210.88□□□□□ -0.674e-8■□□□□ 9
SRSF1Q07955 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.62□□□□□ -2.154e-8■□□□□ 9
SRSF1Q07955 AFMID-213ENST00000591538 487 ntTSL 315.42■□□□□ 0.062e-9■□□□□ 9
SRSF1Q07955 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.212e-9■□□□□ 9
SRSF1Q07955 AFMID-212ENST00000591256 631 ntTSL 411.37□□□□□ -0.592e-9■□□□□ 9
SRSF1Q07955 AFMID-209ENST00000589107 577 ntTSL 411.37□□□□□ -0.592e-9■□□□□ 9
SRSF1Q07955 AFMID-208ENST00000588800 647 ntTSL 2 BASIC11.11□□□□□ -0.632e-9■□□□□ 9
SRSF1Q07955 AFMID-211ENST00000589664 754 ntTSL 510.29□□□□□ -0.762e-9■□□□□ 9
SRSF1Q07955 AFMID-206ENST00000587750 541 ntTSL 310.09□□□□□ -0.792e-9■□□□□ 9
SRSF1Q07955 AFMID-204ENST00000586542 569 ntTSL 410.02□□□□□ -0.812e-9■□□□□ 9
SRSF1Q07955 AFMID-207ENST00000588199 778 ntTSL 510.02□□□□□ -0.812e-9■□□□□ 9
SRSF1Q07955 AFMID-214ENST00000591952 582 ntTSL 2 BASIC9.69□□□□□ -0.862e-9■□□□□ 9
SRSF1Q07955 AFMID-203ENST00000585419 493 ntTSL 39.34□□□□□ -0.912e-9■□□□□ 9
SRSF1Q07955 AFMID-202ENST00000409257 1730 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.922e-9■□□□□ 9
SRSF1Q07955 AFMID-215ENST00000592988 1605 ntTSL 28.83□□□□□ -12e-9■□□□□ 9
SRSF1Q07955 SPCS3-203ENST00000507678 2655 ntTSL 216.58■□□□□ 0.247e-9■□□□□ 9
SRSF1Q07955 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.737e-9■□□□□ 9
SRSF1Q07955 MCM7-207ENST00000465738 448 ntTSL 28.89□□□□□ -0.995e-11■□□□□ 9
SRSF1Q07955 TXNL4A-207ENST00000586825 586 ntTSL 325.74■■□□□ 1.716e-7■□□□□ 9
SRSF1Q07955 TXNL4A-205ENST00000586295 706 ntTSL 324.38■■□□□ 1.496e-7■□□□□ 9
SRSF1Q07955 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.18■■□□□ 1.466e-7■□□□□ 9
SRSF1Q07955 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.68■■□□□ 1.386e-7■□□□□ 9
Retrieved 100 of 14,836 protein–RNA pairs in 579.5 ms