RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-208ENST00000579466 NISCHQ9Y2I1 1504 aa24.32■■□□□ 1.48
MSI2-208ENST00000579466 ABCC9O60706 1549 aa22.12■■□□□ 1.13
MSI2-208ENST00000579466 CCDC180Q9P1Z9 1646 aa21.92■■□□□ 1.1
MSI2-208ENST00000579466 RB1CC1Q8TDY2 1594 aa20.93■□□□□ 0.94
MSI2-208ENST00000579466 DNAJC5BQ9UF47 199 aa20.8■□□□□ 0.92
MSI2-208ENST00000579466 NACADO15069 1562 aa20.71■□□□□ 0.91
MSI2-208ENST00000579466 DCAF8L2P0C7V8 631 aa20.69■□□□□ 0.9
MSI2-208ENST00000579466 UNC13AQ9UPW8 1703 aa20.56■□□□□ 0.88
MSI2-208ENST00000579466 PABPN1Q86U42 306 aaKnown RBP eCLIP20.55■□□□□ 0.88
MSI2-208ENST00000579466 BICRAQ9NZM4 1560 aa20.33■□□□□ 0.84
MSI2-208ENST00000579466 MYO15BQ96JP2 1530 aa20.29■□□□□ 0.84
MSI2-208ENST00000579466 ZCCHC6Q5VYS8 1495 aaKnown RBP20.14■□□□□ 0.81
MSI2-208ENST00000579466 SCRIBQ14160 1630 aa20.05■□□□□ 0.8
MSI2-208ENST00000579466 DCAF1Q9Y4B6 1507 aa20.01■□□□□ 0.79
MSI2-208ENST00000579466 CC2D2AQ9P2K1 1620 aa19.95■□□□□ 0.78
MSI2-208ENST00000579466 SHROOM4Q9ULL8 1493 aa19.93■□□□□ 0.78
MSI2-208ENST00000579466 CECR2Q9BXF3 1484 aa19.9■□□□□ 0.78
MSI2-208ENST00000579466 EIF4G1Q04637 1599 aaKnown RBP19.86■□□□□ 0.77
MSI2-208ENST00000579466 DNAJC5Q9H3Z4 198 aa19.15■□□□□ 0.66
MSI2-208ENST00000579466 ERCC6Q03468 1493 aa19.1■□□□□ 0.65
MSI2-208ENST00000579466 NCAPD3P42695 1498 aa19.09■□□□□ 0.65
MSI2-208ENST00000579466 ATAD2BQ9ULI0 1458 aa19.05■□□□□ 0.64
MSI2-208ENST00000579466 SMARCA4P51532 1647 aa19.05■□□□□ 0.64
MSI2-208ENST00000579466 CUX2O14529 1486 aa19.03■□□□□ 0.64
MSI2-208ENST00000579466 SMARCA2P51531 1590 aa19■□□□□ 0.63
MSI2-208ENST00000579466 HMGXB3Q12766 1538 aa18.98■□□□□ 0.63
MSI2-208ENST00000579466 NESP48681 1621 aa18.96■□□□□ 0.63
MSI2-208ENST00000579466 BAZ1BQ9UIG0 1483 aaKnown RBP18.9■□□□□ 0.62
MSI2-208ENST00000579466 BAZ1AQ9NRL2 1556 aaPredicted RBP18.9■□□□□ 0.62
MSI2-208ENST00000579466 PEG3Q9GZU2 1588 aa18.79■□□□□ 0.6
MSI2-208ENST00000579466 MROH2BQ7Z745 1585 aa18.78■□□□□ 0.6
MSI2-208ENST00000579466 THOC2Q8NI27 1593 aaKnown RBP18.78■□□□□ 0.6
MSI2-208ENST00000579466 KIF21AQ7Z4S6 1674 aa18.75■□□□□ 0.59
MSI2-208ENST00000579466 LAMC3Q9Y6N6 1575 aa18.74■□□□□ 0.59
MSI2-208ENST00000579466 PDS5BQ9NTI5 1447 aa18.6■□□□□ 0.57
MSI2-208ENST00000579466 WIZO95785 1651 aa18.6■□□□□ 0.57
MSI2-208ENST00000579466 CADPSQ9ULU8 1353 aa18.52■□□□□ 0.55
MSI2-208ENST00000579466 MRC2Q9UBG0 1479 aa18.5■□□□□ 0.55
MSI2-208ENST00000579466 WDR62O43379 1518 aa18.45■□□□□ 0.54
MSI2-208ENST00000579466 CEP164Q9UPV0 1460 aa18.41■□□□□ 0.54
MSI2-208ENST00000579466 TRIM41Q8WV44 630 aa18.4■□□□□ 0.54
MSI2-208ENST00000579466 FANCD2Q9BXW9 1451 aa18.37■□□□□ 0.53
MSI2-208ENST00000579466 TOP2AP11388 1531 aaKnown RBP18.3■□□□□ 0.52
MSI2-208ENST00000579466 RSF1Q96T23 1441 aaPredicted RBP18.29■□□□□ 0.52
MSI2-208ENST00000579466 CFTRP13569 1480 aa18.28■□□□□ 0.52
MSI2-208ENST00000579466 URB2Q14146 1524 aaKnown RBP18.23■□□□□ 0.51
MSI2-208ENST00000579466 PRDM2Q13029 1718 aa18.2■□□□□ 0.5
MSI2-208ENST00000579466 OSCARQ8IYS5 282 aa18.12■□□□□ 0.49
MSI2-208ENST00000579466 CCDC88BA6NC98 1476 aa18.07■□□□□ 0.48
MSI2-208ENST00000579466 ZNF608Q9ULD9 1512 aaPredicted RBP18.05■□□□□ 0.48
MSI2-208ENST00000579466 IFT140Q96RY7 1462 aa18.01■□□□□ 0.47
MSI2-208ENST00000579466 TOPBP1Q92547 1522 aa18.01■□□□□ 0.47
MSI2-208ENST00000579466 RIMBP3CA6NJZ7 1639 aa18.01■□□□□ 0.47
MSI2-208ENST00000579466 RIMBP3BA6NNM3 1639 aa18.01■□□□□ 0.47
MSI2-208ENST00000579466 RIMBP3Q9UFD9 1639 aa18.01■□□□□ 0.47
MSI2-208ENST00000579466 EIF4G3O43432 1585 aaKnown RBP17.98■□□□□ 0.47
MSI2-208ENST00000579466 DNMBPQ6XZF7 1577 aa17.93■□□□□ 0.46
MSI2-208ENST00000579466 CHD1O14646 1710 aa17.91■□□□□ 0.46
MSI2-208ENST00000579466 ARHGEF11O15085 1522 aa17.91■□□□□ 0.46
MSI2-208ENST00000579466 ABCC8Q09428 1581 aa17.88■□□□□ 0.45
MSI2-208ENST00000579466 AQRO60306 1485 aaKnown RBP eCLIP17.86■□□□□ 0.45
MSI2-208ENST00000579466 TARBP1Q13395 1621 aaKnown RBP17.86■□□□□ 0.45
MSI2-208ENST00000579466 POLA1P09884 1462 aaPredicted RBP17.82■□□□□ 0.44
MSI2-208ENST00000579466 FBLN2P98095 1184 aa17.81■□□□□ 0.44
MSI2-208ENST00000579466 RAD54L2Q9Y4B4 1467 aa17.78■□□□□ 0.44
MSI2-208ENST00000579466 CYB5RLQ6IPT4 315 aa17.77■□□□□ 0.44
MSI2-208ENST00000579466 ARAP1Q96P48 1450 aa17.72■□□□□ 0.43
MSI2-208ENST00000579466 TDRD9Q8NDG6 1382 aaKnown RBP17.72■□□□□ 0.43
MSI2-208ENST00000579466 SOGA1O94964 1423 aa17.71■□□□□ 0.43
MSI2-208ENST00000579466 FGD5Q6ZNL6 1462 aa17.7■□□□□ 0.42
MSI2-208ENST00000579466 SNAPC4Q5SXM2 1469 aa17.69■□□□□ 0.42
MSI2-208ENST00000579466 TRHP20396 242 aaPredicted RBP17.66■□□□□ 0.42
MSI2-208ENST00000579466 CUX1P39880 1505 aa17.65■□□□□ 0.42
MSI2-208ENST00000579466 CLASP1Q7Z460 1538 aa17.61■□□□□ 0.41
MSI2-208ENST00000579466 WDR97A6NE52 1622 aa17.61■□□□□ 0.41
MSI2-208ENST00000579466 SYNJ1O43426 1573 aa17.6■□□□□ 0.41
MSI2-208ENST00000579466 PBRM1Q86U86 1689 aa17.6■□□□□ 0.41
MSI2-208ENST00000579466 CHMP7Q8WUX9 453 aaPredicted RBP17.59■□□□□ 0.41
MSI2-208ENST00000579466 MAGI1Q96QZ7 1491 aaPredicted RBP17.57■□□□□ 0.4
MSI2-208ENST00000579466 GRIN2BQ13224 1484 aa17.56■□□□□ 0.4
MSI2-208ENST00000579466 SYNJ2O15056 1496 aa17.53■□□□□ 0.4
MSI2-208ENST00000579466 GAPVD1Q14C86 1478 aa17.5■□□□□ 0.39
MSI2-208ENST00000579466 ABCA5Q8WWZ7 1642 aa17.48■□□□□ 0.39
MSI2-208ENST00000579466 SUPT5HO00267 1087 aaKnown RBP17.47■□□□□ 0.39
MSI2-208ENST00000579466 ABCA10Q8WWZ4 1543 aa17.44■□□□□ 0.38
MSI2-208ENST00000579466 ADAMTS12P58397 1594 aa17.38■□□□□ 0.37
MSI2-208ENST00000579466 ERCC6L2Q5T890 1561 aa17.38■□□□□ 0.37
MSI2-208ENST00000579466 GRIN2AQ12879 1464 aa17.37■□□□□ 0.37
MSI2-208ENST00000579466 CEP170Q5SW79 1584 aa17.35■□□□□ 0.37
MSI2-208ENST00000579466 WRNQ14191 1432 aaPredicted RBP eCLIP17.34■□□□□ 0.37
MSI2-208ENST00000579466 BIVM-ERCC5R4GMW8 1640 aa17.34■□□□□ 0.37
MSI2-208ENST00000579466 TOP2BQ02880 1626 aa17.32■□□□□ 0.36
MSI2-208ENST00000579466 NUP160Q12769 1436 aa17.27■□□□□ 0.35
MSI2-208ENST00000579466 FHAD1B1AJZ9 1412 aa17.25■□□□□ 0.35
MSI2-208ENST00000579466 SHROOM2Q13796 1616 aa17.25■□□□□ 0.35
MSI2-208ENST00000579466 AEBP2Q6ZN18 517 aaPredicted RBP17.24■□□□□ 0.35
MSI2-208ENST00000579466 ERICH3Q5RHP9 1530 aa17.21■□□□□ 0.35
MSI2-208ENST00000579466 KIF13AQ9H1H9 1805 aa17.17■□□□□ 0.34
MSI2-208ENST00000579466 PRG4Q92954 1404 aaPredicted RBP17.16■□□□□ 0.34
MSI2-208ENST00000579466 RUSC2Q8N2Y8 1516 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 609.9 ms