Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC096631.2-201ENST00000436136 790 ntBASIC23.63■■□□□ 1.37
CHD8Q9HCK8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.62■■□□□ 1.37
CHD8Q9HCK8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHD8Q9HCK8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
CHD8Q9HCK8 BX664725.1-201ENST00000438252 379 ntBASIC23.62■■□□□ 1.37
CHD8Q9HCK8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.62■■□□□ 1.37
CHD8Q9HCK8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CHD8Q9HCK8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHD8Q9HCK8 AC135279.3-201ENST00000610945 1311 ntBASIC23.6■■□□□ 1.37
CHD8Q9HCK8 AL136116.3-201ENST00000402907 1138 ntBASIC23.6■■□□□ 1.37
CHD8Q9HCK8 AC019171.1-201ENST00000601251 1056 ntBASIC23.6■■□□□ 1.37
CHD8Q9HCK8 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
CHD8Q9HCK8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.59■■□□□ 1.37
CHD8Q9HCK8 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHD8Q9HCK8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.59■■□□□ 1.37
CHD8Q9HCK8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.59■■□□□ 1.37
CHD8Q9HCK8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.59■■□□□ 1.37
CHD8Q9HCK8 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.59■■□□□ 1.37
CHD8Q9HCK8 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CHD8Q9HCK8 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.58■■□□□ 1.37
CHD8Q9HCK8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.58■■□□□ 1.36
CHD8Q9HCK8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
CHD8Q9HCK8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHD8Q9HCK8 MIR4466-201ENST00000606121 54 ntBASIC23.57■■□□□ 1.36
CHD8Q9HCK8 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHD8Q9HCK8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHD8Q9HCK8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
CHD8Q9HCK8 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.57■■□□□ 1.36
CHD8Q9HCK8 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CHD8Q9HCK8 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHD8Q9HCK8 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.56■■□□□ 1.36
CHD8Q9HCK8 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHD8Q9HCK8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
CHD8Q9HCK8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.54■■□□□ 1.36
CHD8Q9HCK8 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.54■■□□□ 1.36
CHD8Q9HCK8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.54■■□□□ 1.36
CHD8Q9HCK8 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHD8Q9HCK8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHD8Q9HCK8 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.53■■□□□ 1.36
CHD8Q9HCK8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.53■■□□□ 1.36
CHD8Q9HCK8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHD8Q9HCK8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.53■■□□□ 1.36
CHD8Q9HCK8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHD8Q9HCK8 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.53■■□□□ 1.36
CHD8Q9HCK8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHD8Q9HCK8 SUDS3P1-201ENST00000505831 966 ntBASIC23.52■■□□□ 1.36
CHD8Q9HCK8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.52■■□□□ 1.36
CHD8Q9HCK8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.52■■□□□ 1.36
CHD8Q9HCK8 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.52■■□□□ 1.36
CHD8Q9HCK8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHD8Q9HCK8 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHD8Q9HCK8 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
CHD8Q9HCK8 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHD8Q9HCK8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.51■■□□□ 1.35
CHD8Q9HCK8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
CHD8Q9HCK8 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHD8Q9HCK8 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
CHD8Q9HCK8 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CHD8Q9HCK8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
CHD8Q9HCK8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.5■■□□□ 1.35
CHD8Q9HCK8 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHD8Q9HCK8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.5■■□□□ 1.35
CHD8Q9HCK8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CHD8Q9HCK8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CHD8Q9HCK8 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHD8Q9HCK8 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CHD8Q9HCK8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.49■■□□□ 1.35
CHD8Q9HCK8 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.49■■□□□ 1.35
CHD8Q9HCK8 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHD8Q9HCK8 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC23.49■■□□□ 1.35
CHD8Q9HCK8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CHD8Q9HCK8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.47■■□□□ 1.35
CHD8Q9HCK8 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHD8Q9HCK8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.47■■□□□ 1.35
CHD8Q9HCK8 MIR3621-201ENST00000580529 85 ntBASIC23.47■■□□□ 1.35
CHD8Q9HCK8 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
CHD8Q9HCK8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CHD8Q9HCK8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.46■■□□□ 1.35
CHD8Q9HCK8 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CHD8Q9HCK8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.46■■□□□ 1.35
CHD8Q9HCK8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.46■■□□□ 1.35
CHD8Q9HCK8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.46■■□□□ 1.35
CHD8Q9HCK8 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CHD8Q9HCK8 MIR3960-201ENST00000583311 91 ntBASIC23.46■■□□□ 1.35
CHD8Q9HCK8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CHD8Q9HCK8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CHD8Q9HCK8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.45■■□□□ 1.34
CHD8Q9HCK8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.45■■□□□ 1.34
CHD8Q9HCK8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
CHD8Q9HCK8 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
CHD8Q9HCK8 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.45■■□□□ 1.34
CHD8Q9HCK8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CHD8Q9HCK8 TSPY9P-201ENST00000440215 945 ntBASIC23.44■■□□□ 1.34
CHD8Q9HCK8 TSPY11P-201ENST00000442607 1045 ntBASIC23.44■■□□□ 1.34
CHD8Q9HCK8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.43■■□□□ 1.34
CHD8Q9HCK8 AC087623.3-201ENST00000607047 1098 ntBASIC23.43■■□□□ 1.34
CHD8Q9HCK8 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.43■■□□□ 1.34
CHD8Q9HCK8 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC23.43■■□□□ 1.34
CHD8Q9HCK8 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.43■■□□□ 1.34
CHD8Q9HCK8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms