Protein–RNA interactions for Protein: P0C2J4

TY2A-LR1, Transposon Ty2-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-LR1P0C2J4 NUP49YGL172W 1419 nt6.45□□□□□ -1.38
TY2A-LR1P0C2J4 MCH2YKL221W 1422 nt6.45□□□□□ -1.38
TY2A-LR1P0C2J4 LIA1YJR070C 978 nt6.45□□□□□ -1.38
TY2A-LR1P0C2J4 ARC35YNR035C 1029 nt6.45□□□□□ -1.38
TY2A-LR1P0C2J4 NUP84YDL116W 2181 nt6.45□□□□□ -1.38
TY2A-LR1P0C2J4 FCP1YMR277W 2199 nt6.45□□□□□ -1.38
TY2A-LR1P0C2J4 CYS4YGR155W 1524 nt6.45□□□□□ -1.38
TY2A-LR1P0C2J4 YFL052WYFL052W 1398 nt6.44□□□□□ -1.38
TY2A-LR1P0C2J4 MSB3YNL293W 1902 nt6.44□□□□□ -1.38
TY2A-LR1P0C2J4 PAC2YER007W 1557 nt6.44□□□□□ -1.38
TY2A-LR1P0C2J4 MSC3YLR219W 2187 nt6.44□□□□□ -1.38
TY2A-LR1P0C2J4 ERS1YCR075C 783 nt6.44□□□□□ -1.38
TY2A-LR1P0C2J4 MRPS28YDR337W 861 nt6.44□□□□□ -1.38
TY2A-LR1P0C2J4 HOC1YJR075W 1191 nt6.44□□□□□ -1.38
TY2A-LR1P0C2J4 ASR1YPR093C 867 nt6.44□□□□□ -1.38
TY2A-LR1P0C2J4 DRS1YLL008W 2259 nt6.44□□□□□ -1.38
TY2A-LR1P0C2J4 YHR140WYHR140W 720 nt6.43□□□□□ -1.38
TY2A-LR1P0C2J4 CBR1YIL043C 855 nt6.43□□□□□ -1.38
TY2A-LR1P0C2J4 RDN5-2RDN5-2 119 nt6.43□□□□□ -1.38
TY2A-LR1P0C2J4 RDN5-3RDN5-3 119 nt6.43□□□□□ -1.38
TY2A-LR1P0C2J4 RDN5-4RDN5-4 119 nt6.43□□□□□ -1.38
TY2A-LR1P0C2J4 RDN5-5RDN5-5 119 nt6.43□□□□□ -1.38
TY2A-LR1P0C2J4 SSC1YJR045C 1965 nt6.42□□□□□ -1.38
TY2A-LR1P0C2J4 SMC5YOL034W 3282 nt6.42□□□□□ -1.38
TY2A-LR1P0C2J4 CCR4YAL021C 2514 nt6.42□□□□□ -1.38
TY2A-LR1P0C2J4 NSE5YML023C 1671 nt6.42□□□□□ -1.38
TY2A-LR1P0C2J4 AGP2YBR132C 1791 nt6.41□□□□□ -1.38
TY2A-LR1P0C2J4 GPD1YDL022W 1176 nt6.41□□□□□ -1.38
TY2A-LR1P0C2J4 HED1YDR014W-A 489 nt6.41□□□□□ -1.38
TY2A-LR1P0C2J4 COS6YGR295C 1146 nt6.41□□□□□ -1.38
TY2A-LR1P0C2J4 YSC83YHR017W 1158 nt6.41□□□□□ -1.38
TY2A-LR1P0C2J4 CYB2YML054C 1776 nt6.4□□□□□ -1.38
TY2A-LR1P0C2J4 YDL177CYDL177C 513 nt6.4□□□□□ -1.38
TY2A-LR1P0C2J4 TRS31YDR472W 852 nt6.4□□□□□ -1.38
TY2A-LR1P0C2J4 HGH1YGR187C 1185 nt6.4□□□□□ -1.38
TY2A-LR1P0C2J4 HBN1YCL026C-B 582 nt6.4□□□□□ -1.38
TY2A-LR1P0C2J4 YBR241CYBR241C 1467 nt6.4□□□□□ -1.39
TY2A-LR1P0C2J4 FMP40YPL222W 2067 nt6.4□□□□□ -1.39
TY2A-LR1P0C2J4 TAH11YJR046W 1815 nt6.39□□□□□ -1.39
TY2A-LR1P0C2J4 IES1YFL013C 2079 nt6.39□□□□□ -1.39
TY2A-LR1P0C2J4 MRPL35YDR322W 1104 nt6.39□□□□□ -1.39
TY2A-LR1P0C2J4 HHY1YEL059W 309 nt6.39□□□□□ -1.39
TY2A-LR1P0C2J4 YGR068W-AYGR068W-A 96 nt6.39□□□□□ -1.39
TY2A-LR1P0C2J4 YKL018C-AYKL018C-A 300 nt6.39□□□□□ -1.39
TY2A-LR1P0C2J4 SWD1YAR003W 1281 nt6.39□□□□□ -1.39
TY2A-LR1P0C2J4 TMA46YOR091W 1038 nt6.39□□□□□ -1.39
TY2A-LR1P0C2J4 SEC62YPL094C 825 nt6.39□□□□□ -1.39
TY2A-LR1P0C2J4 YFL013W-AYFL013W-A 804 nt6.38□□□□□ -1.39
TY2A-LR1P0C2J4 APM4YOL062C 1476 nt6.38□□□□□ -1.39
TY2A-LR1P0C2J4 FCY22YER060W-A 1593 nt6.38□□□□□ -1.39
TY2A-LR1P0C2J4 GAA1YLR088W 1845 nt6.38□□□□□ -1.39
TY2A-LR1P0C2J4 PPM2YOL141W 2088 nt6.37□□□□□ -1.39
TY2A-LR1P0C2J4 CDC10YCR002C 969 nt6.37□□□□□ -1.39
TY2A-LR1P0C2J4 LAG2YOL025W 1983 nt6.37□□□□□ -1.39
TY2A-LR1P0C2J4 CRH1YGR189C 1524 nt6.36□□□□□ -1.39
TY2A-LR1P0C2J4 RPL2BYIL018W 765 nt6.36□□□□□ -1.39
TY2A-LR1P0C2J4 PAP1YKR002W 1707 nt6.36□□□□□ -1.39
TY2A-LR1P0C2J4 ATF1YOR377W 1578 nt6.35□□□□□ -1.39
TY2A-LR1P0C2J4 RGD2YFL047W 2145 nt6.35□□□□□ -1.39
TY2A-LR1P0C2J4 YHR020WYHR020W 2067 nt6.35□□□□□ -1.39
TY2A-LR1P0C2J4 SRF1YDL133W 1314 nt6.35□□□□□ -1.39
TY2A-LR1P0C2J4 TRR1YDR353W 960 nt6.35□□□□□ -1.39
TY2A-LR1P0C2J4 SCO2YBR024W 906 nt6.35□□□□□ -1.39
TY2A-LR1P0C2J4 CCT3YJL014W 1605 nt6.35□□□□□ -1.39
TY2A-LR1P0C2J4 PPS1YBR276C 2424 nt6.35□□□□□ -1.39
TY2A-LR1P0C2J4 SIR2YDL042C 1689 nt6.34□□□□□ -1.39
TY2A-LR1P0C2J4 TRP1YDR007W 675 nt6.34□□□□□ -1.39
TY2A-LR1P0C2J4 LCL3YGL085W 825 nt6.34□□□□□ -1.39
TY2A-LR1P0C2J4 FZF1YGL254W 900 nt6.34□□□□□ -1.39
TY2A-LR1P0C2J4 ERP5YHR110W 639 nt6.34□□□□□ -1.39
TY2A-LR1P0C2J4 NTG1YAL015C 1200 nt6.34□□□□□ -1.39
TY2A-LR1P0C2J4 ASF1YJL115W 840 nt6.34□□□□□ -1.39
TY2A-LR1P0C2J4 ATG36YJL185C 882 nt6.34□□□□□ -1.39
TY2A-LR1P0C2J4 YKL102CYKL102C 306 nt6.34□□□□□ -1.39
TY2A-LR1P0C2J4 YNL092WYNL092W 1203 nt6.34□□□□□ -1.39
TY2A-LR1P0C2J4 HMT1YBR034C 1047 nt6.34□□□□□ -1.39
TY2A-LR1P0C2J4 ARO10YDR380W 1908 nt6.34□□□□□ -1.39
TY2A-LR1P0C2J4 GPA1YHR005C 1419 nt6.33□□□□□ -1.4
TY2A-LR1P0C2J4 DOT1YDR440W 1749 nt6.33□□□□□ -1.4
TY2A-LR1P0C2J4 MSS116YDR194C 1995 nt6.33□□□□□ -1.4
TY2A-LR1P0C2J4 IRC11YOR013W 471 nt6.33□□□□□ -1.4
TY2A-LR1P0C2J4 YOR111WYOR111W 699 nt6.33□□□□□ -1.4
TY2A-LR1P0C2J4 LSC1YOR142W 990 nt6.33□□□□□ -1.4
TY2A-LR1P0C2J4 PAP2YOL115W 1755 nt6.33□□□□□ -1.4
TY2A-LR1P0C2J4 CDC13YDL220C 2775 nt6.33□□□□□ -1.4
TY2A-LR1P0C2J4 HOS2YGL194C 1359 nt6.32□□□□□ -1.4
TY2A-LR1P0C2J4 RNH1YMR234W 1047 nt6.32□□□□□ -1.4
TY2A-LR1P0C2J4 TAF9YMR236W 474 nt6.32□□□□□ -1.4
TY2A-LR1P0C2J4 COQ1YBR003W 1422 nt6.32□□□□□ -1.4
TY2A-LR1P0C2J4 JIP4YDR475C 2631 nt6.31□□□□□ -1.4
TY2A-LR1P0C2J4 tG(GCC)BtG(GCC)B 71 nt6.31□□□□□ -1.4
TY2A-LR1P0C2J4 SUF16tG(GCC)C 71 nt6.31□□□□□ -1.4
TY2A-LR1P0C2J4 tG(GCC)D1tG(GCC)D1 71 nt6.31□□□□□ -1.4
TY2A-LR1P0C2J4 tG(GCC)D2tG(GCC)D2 71 nt6.31□□□□□ -1.4
TY2A-LR1P0C2J4 tG(GCC)EtG(GCC)E 71 nt6.31□□□□□ -1.4
TY2A-LR1P0C2J4 SUF20tG(GCC)F1 71 nt6.31□□□□□ -1.4
TY2A-LR1P0C2J4 tG(GCC)F2tG(GCC)F2 71 nt6.31□□□□□ -1.4
TY2A-LR1P0C2J4 tG(GCC)G1tG(GCC)G1 71 nt6.31□□□□□ -1.4
TY2A-LR1P0C2J4 tG(GCC)G2tG(GCC)G2 71 nt6.31□□□□□ -1.4
TY2A-LR1P0C2J4 tG(GCC)J1tG(GCC)J1 71 nt6.31□□□□□ -1.4
Retrieved 100 of 7,029 protein–RNA pairs in 14.6 ms