Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.45■□□□□ 0.54
LTAP01374 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LTAP01374 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LTAP01374 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LTAP01374 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
LTAP01374 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LTAP01374 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LTAP01374 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LTAP01374 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LTAP01374 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LTAP01374 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LTAP01374 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LTAP01374 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LTAP01374 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LTAP01374 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.42■□□□□ 0.54
LTAP01374 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LTAP01374 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LTAP01374 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
LTAP01374 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LTAP01374 AC097358.2-201ENST00000607541 1159 ntBASIC18.42■□□□□ 0.54
LTAP01374 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
LTAP01374 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
LTAP01374 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.41■□□□□ 0.54
LTAP01374 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LTAP01374 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LTAP01374 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LTAP01374 MIR6090-201ENST00000622481 60 ntBASIC18.41■□□□□ 0.54
LTAP01374 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LTAP01374 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.41■□□□□ 0.54
LTAP01374 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LTAP01374 AL139125.2-201ENST00000623134 1869 ntBASIC18.41■□□□□ 0.54
LTAP01374 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.41■□□□□ 0.54
LTAP01374 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LTAP01374 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.4■□□□□ 0.54
LTAP01374 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LTAP01374 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LTAP01374 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LTAP01374 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.4■□□□□ 0.54
LTAP01374 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LTAP01374 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LTAP01374 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LTAP01374 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
LTAP01374 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.4■□□□□ 0.54
LTAP01374 AC005559.1-201ENST00000589661 871 ntBASIC18.4■□□□□ 0.54
LTAP01374 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.4■□□□□ 0.54
LTAP01374 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.4■□□□□ 0.54
LTAP01374 AC022211.4-201ENST00000625094 2161 ntBASIC18.4■□□□□ 0.54
LTAP01374 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
LTAP01374 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.39■□□□□ 0.53
LTAP01374 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LTAP01374 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.39■□□□□ 0.53
LTAP01374 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LTAP01374 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.39■□□□□ 0.53
LTAP01374 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
LTAP01374 AC138932.3-201ENST00000567634 1902 ntBASIC18.39■□□□□ 0.53
LTAP01374 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.39■□□□□ 0.53
LTAP01374 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.39■□□□□ 0.53
LTAP01374 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LTAP01374 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.38■□□□□ 0.53
LTAP01374 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LTAP01374 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LTAP01374 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LTAP01374 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LTAP01374 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LTAP01374 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LTAP01374 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LTAP01374 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.37■□□□□ 0.53
LTAP01374 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LTAP01374 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LTAP01374 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LTAP01374 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LTAP01374 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LTAP01374 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LTAP01374 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LTAP01374 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.36■□□□□ 0.53
LTAP01374 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LTAP01374 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LTAP01374 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LTAP01374 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LTAP01374 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LTAP01374 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.35■□□□□ 0.53
LTAP01374 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
LTAP01374 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.34■□□□□ 0.53
LTAP01374 AC110285.7-201ENST00000624417 1536 ntBASIC18.34■□□□□ 0.53
LTAP01374 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LTAP01374 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.34■□□□□ 0.53
LTAP01374 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LTAP01374 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LTAP01374 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LTAP01374 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LTAP01374 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LTAP01374 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.33■□□□□ 0.53
LTAP01374 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.33■□□□□ 0.53
LTAP01374 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
LTAP01374 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
LTAP01374 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
LTAP01374 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.33■□□□□ 0.52
LTAP01374 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC18.33■□□□□ 0.52
LTAP01374 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.33■□□□□ 0.52
LTAP01374 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms