Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC168Q8NDH2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC168Q8NDH2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC168Q8NDH2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC168Q8NDH2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC168Q8NDH2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.16■□□□□ 0.98
CCDC168Q8NDH2 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC168Q8NDH2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC168Q8NDH2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC168Q8NDH2 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CCDC168Q8NDH2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
CCDC168Q8NDH2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC168Q8NDH2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC168Q8NDH2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC168Q8NDH2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CCDC168Q8NDH2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC168Q8NDH2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC168Q8NDH2 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.14■□□□□ 0.98
CCDC168Q8NDH2 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CCDC168Q8NDH2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC168Q8NDH2 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.13■□□□□ 0.97
CCDC168Q8NDH2 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC168Q8NDH2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC168Q8NDH2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC168Q8NDH2 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC168Q8NDH2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CCDC168Q8NDH2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC168Q8NDH2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC168Q8NDH2 KRT125P-201ENST00000546827 989 ntBASIC21.12■□□□□ 0.97
CCDC168Q8NDH2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC168Q8NDH2 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC168Q8NDH2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.11■□□□□ 0.97
CCDC168Q8NDH2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC168Q8NDH2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC168Q8NDH2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC168Q8NDH2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.1■□□□□ 0.97
CCDC168Q8NDH2 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC168Q8NDH2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC168Q8NDH2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CCDC168Q8NDH2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC168Q8NDH2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CCDC168Q8NDH2 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC168Q8NDH2 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC168Q8NDH2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC168Q8NDH2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CCDC168Q8NDH2 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.09■□□□□ 0.97
CCDC168Q8NDH2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC168Q8NDH2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC168Q8NDH2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.08■□□□□ 0.97
CCDC168Q8NDH2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.08■□□□□ 0.97
CCDC168Q8NDH2 AC018755.3-202ENST00000596210 929 ntBASIC21.08■□□□□ 0.97
CCDC168Q8NDH2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
CCDC168Q8NDH2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC168Q8NDH2 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.07■□□□□ 0.96
CCDC168Q8NDH2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC168Q8NDH2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC168Q8NDH2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC168Q8NDH2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC168Q8NDH2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC168Q8NDH2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.06■□□□□ 0.96
CCDC168Q8NDH2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC168Q8NDH2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CCDC168Q8NDH2 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC168Q8NDH2 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC168Q8NDH2 AL139246.5-201ENST00000606645 996 ntBASIC21.05■□□□□ 0.96
CCDC168Q8NDH2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
CCDC168Q8NDH2 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC168Q8NDH2 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CCDC168Q8NDH2 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC168Q8NDH2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC168Q8NDH2 AC131281.2-201ENST00000520478 145 ntBASIC21.04■□□□□ 0.96
CCDC168Q8NDH2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC168Q8NDH2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CCDC168Q8NDH2 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC168Q8NDH2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC168Q8NDH2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC168Q8NDH2 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC168Q8NDH2 MIR4787-201ENST00000607364 84 ntBASIC21.03■□□□□ 0.96
CCDC168Q8NDH2 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC168Q8NDH2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC168Q8NDH2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC168Q8NDH2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC168Q8NDH2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC168Q8NDH2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CCDC168Q8NDH2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC168Q8NDH2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC168Q8NDH2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC168Q8NDH2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC168Q8NDH2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC168Q8NDH2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC168Q8NDH2 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC168Q8NDH2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC168Q8NDH2 AC092666.2-201ENST00000613287 246 ntBASIC21.01■□□□□ 0.95
CCDC168Q8NDH2 AC110285.6-201ENST00000617652 491 ntBASIC21.01■□□□□ 0.95
CCDC168Q8NDH2 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC168Q8NDH2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC168Q8NDH2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21■□□□□ 0.95
CCDC168Q8NDH2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21■□□□□ 0.95
CCDC168Q8NDH2 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21■□□□□ 0.95
CCDC168Q8NDH2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms