Protein–RNA interactions for Protein: Q04487

SHH3, Mitochondrial inner membrane protein SHH3, yeastyeast

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHH3Q04487 PET494YNR045W 1470 nt5.71□□□□□ -1.49
SHH3Q04487 CCT3YJL014W 1605 nt5.71□□□□□ -1.5
SHH3Q04487 ERS1YCR075C 783 nt5.71□□□□□ -1.5
SHH3Q04487 YGL081WYGL081W 963 nt5.71□□□□□ -1.5
SHH3Q04487 HBN1YCL026C-B 582 nt5.71□□□□□ -1.5
SHH3Q04487 CSC1YLR241W 2349 nt5.71□□□□□ -1.5
SHH3Q04487 MRPL28YDR462W 444 nt5.7□□□□□ -1.5
SHH3Q04487 DMC1YER179W 1005 nt5.7□□□□□ -1.5
SHH3Q04487 DPM1YPR183W 804 nt5.7□□□□□ -1.5
SHH3Q04487 YDR476CYDR476C 675 nt5.69□□□□□ -1.5
SHH3Q04487 PXL1YKR090W 2121 nt5.69□□□□□ -1.5
SHH3Q04487 GEF1YJR040W 2340 nt5.69□□□□□ -1.5
SHH3Q04487 CTA1YDR256C 1548 nt5.69□□□□□ -1.5
SHH3Q04487 PAM17YKR065C 594 nt5.68□□□□□ -1.5
SHH3Q04487 RGD1YBR260C 2001 nt5.68□□□□□ -1.5
SHH3Q04487 NMT1YLR195C 1368 nt5.67□□□□□ -1.5
SHH3Q04487 KTR5YNL029C 1569 nt5.67□□□□□ -1.5
SHH3Q04487 AIM3YBR108W 2844 nt5.67□□□□□ -1.5
SHH3Q04487 HPT1YDR399W 666 nt5.67□□□□□ -1.5
SHH3Q04487 RTC4YNL254C 1206 nt5.67□□□□□ -1.5
SHH3Q04487 HOG1YLR113W 1308 nt5.67□□□□□ -1.5
SHH3Q04487 NCA3YJL116C 1014 nt5.66□□□□□ -1.5
SHH3Q04487 OPI8YKR035C 642 nt5.66□□□□□ -1.5
SHH3Q04487 RSA4YCR072C 1548 nt5.65□□□□□ -1.5
SHH3Q04487 ALT2YDR111C 1524 nt5.65□□□□□ -1.5
SHH3Q04487 YCR049CYCR049C 447 nt5.65□□□□□ -1.5
SHH3Q04487 YIA6YIL006W 1122 nt5.65□□□□□ -1.5
SHH3Q04487 RDN5-2RDN5-2 119 nt5.65□□□□□ -1.5
SHH3Q04487 RDN5-3RDN5-3 119 nt5.65□□□□□ -1.5
SHH3Q04487 RDN5-4RDN5-4 119 nt5.65□□□□□ -1.5
SHH3Q04487 RDN5-5RDN5-5 119 nt5.65□□□□□ -1.5
SHH3Q04487 YML122CYML122C 381 nt5.65□□□□□ -1.5
SHH3Q04487 YNR014WYNR014W 639 nt5.65□□□□□ -1.5
SHH3Q04487 YOL099CYOL099C 492 nt5.64□□□□□ -1.51
SHH3Q04487 SLA2YNL243W 2907 nt5.64□□□□□ -1.51
SHH3Q04487 YPQ2YDR352W 954 nt5.63□□□□□ -1.51
SHH3Q04487 COX16YJL003W 357 nt5.63□□□□□ -1.51
SHH3Q04487 RMD9YGL107C 1941 nt5.63□□□□□ -1.51
SHH3Q04487 TUF1YOR187W 1314 nt5.63□□□□□ -1.51
SHH3Q04487 GPA1YHR005C 1419 nt5.63□□□□□ -1.51
SHH3Q04487 PAC2YER007W 1557 nt5.63□□□□□ -1.51
SHH3Q04487 RGT2YDL138W 2292 nt5.62□□□□□ -1.51
SHH3Q04487 CCP1YKR066C 1086 nt5.62□□□□□ -1.51
SHH3Q04487 NFS1YCL017C 1494 nt5.62□□□□□ -1.51
SHH3Q04487 PPH22YDL188C 1134 nt5.61□□□□□ -1.51
SHH3Q04487 DOC1YGL240W 753 nt5.61□□□□□ -1.51
SHH3Q04487 FUS3YBL016W 1062 nt5.61□□□□□ -1.51
SHH3Q04487 RGD2YFL047W 2145 nt5.6□□□□□ -1.51
SHH3Q04487 tL(UAA)B1tL(UAA)B1 84 nt5.6□□□□□ -1.51
SHH3Q04487 tL(UAA)B2tL(UAA)B2 84 nt5.6□□□□□ -1.51
SHH3Q04487 tL(UAA)DtL(UAA)D 84 nt5.6□□□□□ -1.51
SHH3Q04487 SUP51tL(UAA)J 84 nt5.6□□□□□ -1.51
SHH3Q04487 tL(UAA)KtL(UAA)K 84 nt5.6□□□□□ -1.51
SHH3Q04487 tL(UAA)LtL(UAA)L 84 nt5.6□□□□□ -1.51
SHH3Q04487 tL(UAA)NtL(UAA)N 84 nt5.6□□□□□ -1.51
SHH3Q04487 CIS3YJL158C 684 nt5.6□□□□□ -1.51
SHH3Q04487 YPL247CYPL247C 1572 nt5.59□□□□□ -1.51
SHH3Q04487 MPE1YKL059C 1326 nt5.59□□□□□ -1.51
SHH3Q04487 TRS31YDR472W 852 nt5.59□□□□□ -1.51
SHH3Q04487 Q0010Q0010 387 nt5.59□□□□□ -1.51
SHH3Q04487 TUB1YML085C 1344 nt5.58□□□□□ -1.52
SHH3Q04487 ARG81YML099C 2643 nt5.58□□□□□ -1.52
SHH3Q04487 IMA5YJL216C 1746 nt5.57□□□□□ -1.52
SHH3Q04487 RPL5YPL131W 894 nt5.57□□□□□ -1.52
SHH3Q04487 ESC8YOL017W 2145 nt5.57□□□□□ -1.52
SHH3Q04487 PPM1YDR435C 987 nt5.56□□□□□ -1.52
SHH3Q04487 PAU21YOR394W 495 nt5.56□□□□□ -1.52
SHH3Q04487 PAU22YPL282C 495 nt5.56□□□□□ -1.52
SHH3Q04487 KEL1YHR158C 3495 nt5.56□□□□□ -1.52
SHH3Q04487 GYP8YFL027C 1494 nt5.56□□□□□ -1.52
SHH3Q04487 YFL013W-AYFL013W-A 804 nt5.55□□□□□ -1.52
SHH3Q04487 YIL077CYIL077C 963 nt5.55□□□□□ -1.52
SHH3Q04487 PEX13YLR191W 1161 nt5.55□□□□□ -1.52
SHH3Q04487 AIM33YML087C 939 nt5.55□□□□□ -1.52
SHH3Q04487 PLB2YMR006C 2121 nt5.55□□□□□ -1.52
SHH3Q04487 YDR387CYDR387C 1668 nt5.55□□□□□ -1.52
SHH3Q04487 SKN1YGR143W 2316 nt5.54□□□□□ -1.52
SHH3Q04487 SKI2YLR398C 3864 nt5.54□□□□□ -1.52
SHH3Q04487 PAT1YCR077C 2391 nt5.54□□□□□ -1.52
SHH3Q04487 GCN3YKR026C 918 nt5.54□□□□□ -1.52
SHH3Q04487 SPG5YMR191W 1122 nt5.54□□□□□ -1.52
SHH3Q04487 QNS1YHR074W 2145 nt5.54□□□□□ -1.52
SHH3Q04487 PEX31YGR004W 1389 nt5.54□□□□□ -1.52
SHH3Q04487 MLS1YNL117W 1665 nt5.53□□□□□ -1.52
SHH3Q04487 LSG1YGL099W 1923 nt5.53□□□□□ -1.52
SHH3Q04487 HIS1YER055C 894 nt5.53□□□□□ -1.52
SHH3Q04487 SOD2YHR008C 702 nt5.53□□□□□ -1.52
SHH3Q04487 DML1YMR211W 1428 nt5.53□□□□□ -1.52
SHH3Q04487 YEL020CYEL020C 1683 nt5.53□□□□□ -1.52
SHH3Q04487 YDL177CYDL177C 513 nt5.52□□□□□ -1.53
SHH3Q04487 URH1YDR400W 1023 nt5.52□□□□□ -1.53
SHH3Q04487 YAL016C-AYAL016C-A 315 nt5.52□□□□□ -1.53
SHH3Q04487 YLR358CYLR358C 564 nt5.52□□□□□ -1.53
SHH3Q04487 RIB1YBL033C 1038 nt5.52□□□□□ -1.53
SHH3Q04487 ATP23YNR020C 813 nt5.52□□□□□ -1.53
SHH3Q04487 NTG2YOL043C 1143 nt5.52□□□□□ -1.53
SHH3Q04487 GET4YOR164C 939 nt5.52□□□□□ -1.53
SHH3Q04487 YPR204WYPR204W 3099 nt5.52□□□□□ -1.53
SHH3Q04487 LDB19YOR322C 2457 nt5.52□□□□□ -1.53
SHH3Q04487 TPO3YPR156C 1869 nt5.51□□□□□ -1.53
Retrieved 100 of 7,029 protein–RNA pairs in 10.8 ms