Protein–RNA interactions for Protein: P0C2J4

TY2A-LR1, Transposon Ty2-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-LR1P0C2J4 ENB1YOL158C 1821 nt6.65□□□□□ -1.34
TY2A-LR1P0C2J4 LOT6YLR011W 576 nt6.65□□□□□ -1.34
TY2A-LR1P0C2J4 YLR162WYLR162W 357 nt6.65□□□□□ -1.34
TY2A-LR1P0C2J4 PHO85YPL031C 918 nt6.65□□□□□ -1.34
TY2A-LR1P0C2J4 YPR127WYPR127W 1038 nt6.65□□□□□ -1.34
TY2A-LR1P0C2J4 BRN1YBL097W 2265 nt6.64□□□□□ -1.35
TY2A-LR1P0C2J4 ATO2YNR002C 849 nt6.64□□□□□ -1.35
TY2A-LR1P0C2J4 HTZ1YOL012C 405 nt6.64□□□□□ -1.35
TY2A-LR1P0C2J4 YCL049CYCL049C 939 nt6.64□□□□□ -1.35
TY2A-LR1P0C2J4 YDR401WYDR401W 564 nt6.63□□□□□ -1.35
TY2A-LR1P0C2J4 POB3YML069W 1659 nt6.62□□□□□ -1.35
TY2A-LR1P0C2J4 YCR041WYCR041W 333 nt6.62□□□□□ -1.35
TY2A-LR1P0C2J4 HPT1YDR399W 666 nt6.62□□□□□ -1.35
TY2A-LR1P0C2J4 TIF2YJL138C 1188 nt6.62□□□□□ -1.35
TY2A-LR1P0C2J4 TIF1YKR059W 1188 nt6.62□□□□□ -1.35
TY2A-LR1P0C2J4 YNL040WYNL040W 1371 nt6.61□□□□□ -1.35
TY2A-LR1P0C2J4 SNF4YGL115W 969 nt6.61□□□□□ -1.35
TY2A-LR1P0C2J4 URA1YKL216W 945 nt6.61□□□□□ -1.35
TY2A-LR1P0C2J4 YNR005CYNR005C 405 nt6.61□□□□□ -1.35
TY2A-LR1P0C2J4 SLD7YOR060C 774 nt6.61□□□□□ -1.35
TY2A-LR1P0C2J4 CTA1YDR256C 1548 nt6.6□□□□□ -1.35
TY2A-LR1P0C2J4 ECM10YEL030W 1935 nt6.6□□□□□ -1.35
TY2A-LR1P0C2J4 DLD1YDL174C 1764 nt6.6□□□□□ -1.35
TY2A-LR1P0C2J4 YAL045CYAL045C 309 nt6.6□□□□□ -1.35
TY2A-LR1P0C2J4 AIM2YAL049C 741 nt6.6□□□□□ -1.35
TY2A-LR1P0C2J4 ZIM17YNL310C 525 nt6.6□□□□□ -1.35
TY2A-LR1P0C2J4 YOL099CYOL099C 492 nt6.6□□□□□ -1.35
TY2A-LR1P0C2J4 APE4YHR113W 1473 nt6.6□□□□□ -1.35
TY2A-LR1P0C2J4 IRC5YFR038W 2562 nt6.59□□□□□ -1.35
TY2A-LR1P0C2J4 YLR112WYLR112W 420 nt6.59□□□□□ -1.35
TY2A-LR1P0C2J4 SML1YML058W 315 nt6.59□□□□□ -1.35
TY2A-LR1P0C2J4 MIX17YMR002W 471 nt6.59□□□□□ -1.35
TY2A-LR1P0C2J4 NTG2YOL043C 1143 nt6.59□□□□□ -1.35
TY2A-LR1P0C2J4 MCP1YOR228C 909 nt6.59□□□□□ -1.35
TY2A-LR1P0C2J4 YIL108WYIL108W 2091 nt6.59□□□□□ -1.35
TY2A-LR1P0C2J4 ATG23YLR431C 1362 nt6.58□□□□□ -1.36
TY2A-LR1P0C2J4 LGE1YPL055C 999 nt6.58□□□□□ -1.36
TY2A-LR1P0C2J4 ENP1YBR247C 1452 nt6.58□□□□□ -1.36
TY2A-LR1P0C2J4 TDP1YBR223C 1635 nt6.58□□□□□ -1.36
TY2A-LR1P0C2J4 COX16YJL003W 357 nt6.57□□□□□ -1.36
TY2A-LR1P0C2J4 YNR001W-AYNR001W-A 219 nt6.57□□□□□ -1.36
TY2A-LR1P0C2J4 SPE3YPR069C 882 nt6.57□□□□□ -1.36
TY2A-LR1P0C2J4 MSG5YNL053W 1470 nt6.57□□□□□ -1.36
TY2A-LR1P0C2J4 BNA3YJL060W 1335 nt6.56□□□□□ -1.36
TY2A-LR1P0C2J4 YJL163CYJL163C 1668 nt6.56□□□□□ -1.36
TY2A-LR1P0C2J4 ATP4YPL078C 735 nt6.56□□□□□ -1.36
TY2A-LR1P0C2J4 SNT309YPR101W 528 nt6.56□□□□□ -1.36
TY2A-LR1P0C2J4 AAD14YNL331C 1131 nt6.55□□□□□ -1.36
TY2A-LR1P0C2J4 HST2YPL015C 1074 nt6.55□□□□□ -1.36
TY2A-LR1P0C2J4 REG2YBR050C 1017 nt6.55□□□□□ -1.36
TY2A-LR1P0C2J4 YEN1YER041W 2280 nt6.55□□□□□ -1.36
TY2A-LR1P0C2J4 CHS5YLR330W 2016 nt6.54□□□□□ -1.36
TY2A-LR1P0C2J4 REV7YIL139C 738 nt6.54□□□□□ -1.36
TY2A-LR1P0C2J4 AVO2YMR068W 1281 nt6.54□□□□□ -1.36
TY2A-LR1P0C2J4 YOR012WYOR012W 414 nt6.54□□□□□ -1.36
TY2A-LR1P0C2J4 ERG10YPL028W 1197 nt6.54□□□□□ -1.36
TY2A-LR1P0C2J4 YPR076WYPR076W 375 nt6.54□□□□□ -1.36
TY2A-LR1P0C2J4 HXT13YEL069C 1695 nt6.54□□□□□ -1.36
TY2A-LR1P0C2J4 TFC6YDR362C 2019 nt6.54□□□□□ -1.36
TY2A-LR1P0C2J4 ADE5,7YGL234W 2409 nt6.53□□□□□ -1.36
TY2A-LR1P0C2J4 PTC7YHR076W 1032 nt6.53□□□□□ -1.36
TY2A-LR1P0C2J4 FIT2YOR382W 462 nt6.53□□□□□ -1.36
TY2A-LR1P0C2J4 RFS1YBR052C 633 nt6.53□□□□□ -1.36
TY2A-LR1P0C2J4 SPS22YCL048W 1392 nt6.53□□□□□ -1.36
TY2A-LR1P0C2J4 CIR2YOR356W 1896 nt6.52□□□□□ -1.37
TY2A-LR1P0C2J4 YIR017W-AYIR017W-A 600 nt6.52□□□□□ -1.37
TY2A-LR1P0C2J4 REC107YJR021C 945 nt6.52□□□□□ -1.37
TY2A-LR1P0C2J4 YOL046CYOL046C 675 nt6.52□□□□□ -1.37
TY2A-LR1P0C2J4 YIP4YGL198W 708 nt6.51□□□□□ -1.37
TY2A-LR1P0C2J4 MTR3YGR158C 753 nt6.51□□□□□ -1.37
TY2A-LR1P0C2J4 LDB7YBL006C 543 nt6.51□□□□□ -1.37
TY2A-LR1P0C2J4 CEM1YER061C 1329 nt6.5□□□□□ -1.37
TY2A-LR1P0C2J4 VBA5YKR105C 1749 nt6.5□□□□□ -1.37
TY2A-LR1P0C2J4 AFG2YLR397C 2343 nt6.5□□□□□ -1.37
TY2A-LR1P0C2J4 PLB3YOL011W 2061 nt6.5□□□□□ -1.37
TY2A-LR1P0C2J4 AMN1YBR158W 1650 nt6.5□□□□□ -1.37
TY2A-LR1P0C2J4 AGX1YFL030W 1158 nt6.5□□□□□ -1.37
TY2A-LR1P0C2J4 YGL102CYGL102C 429 nt6.5□□□□□ -1.37
TY2A-LR1P0C2J4 YJL144WYJL144W 315 nt6.5□□□□□ -1.37
TY2A-LR1P0C2J4 SPG5YMR191W 1122 nt6.5□□□□□ -1.37
TY2A-LR1P0C2J4 OPT1YJL212C 2400 nt6.5□□□□□ -1.37
TY2A-LR1P0C2J4 BIO3YNR058W 1443 nt6.5□□□□□ -1.37
TY2A-LR1P0C2J4 MRPL28YDR462W 444 nt6.49□□□□□ -1.37
TY2A-LR1P0C2J4 MRPL19YNL185C 477 nt6.49□□□□□ -1.37
TY2A-LR1P0C2J4 YLL058WYLL058W 1728 nt6.49□□□□□ -1.37
TY2A-LR1P0C2J4 TUF1YOR187W 1314 nt6.49□□□□□ -1.37
TY2A-LR1P0C2J4 DPB2YPR175W 2070 nt6.48□□□□□ -1.37
TY2A-LR1P0C2J4 PPH21YDL134C 1110 nt6.48□□□□□ -1.37
TY2A-LR1P0C2J4 YLL056CYLL056C 897 nt6.48□□□□□ -1.37
TY2A-LR1P0C2J4 RPL31BYLR406C 342 nt6.48□□□□□ -1.37
TY2A-LR1P0C2J4 SMX3YPR182W 261 nt6.48□□□□□ -1.37
TY2A-LR1P0C2J4 MPH3YJR160C 1809 nt6.48□□□□□ -1.37
TY2A-LR1P0C2J4 COX15YER141W 1461 nt6.47□□□□□ -1.37
TY2A-LR1P0C2J4 PAC10YGR078C 600 nt6.47□□□□□ -1.37
TY2A-LR1P0C2J4 PUS4YNL292W 1212 nt6.47□□□□□ -1.37
TY2A-LR1P0C2J4 YMR034CYMR034C 1305 nt6.47□□□□□ -1.37
TY2A-LR1P0C2J4 CMR1YDL156W 1569 nt6.46□□□□□ -1.38
TY2A-LR1P0C2J4 PRI1YIR008C 1230 nt6.46□□□□□ -1.38
TY2A-LR1P0C2J4 RGT2YDL138W 2292 nt6.46□□□□□ -1.38
TY2A-LR1P0C2J4 ICP55YER078C 1536 nt6.45□□□□□ -1.38
Retrieved 100 of 7,029 protein–RNA pairs in 26 ms