Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 MIR3180-4-201ENST00000582223 153 ntBASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 AC024563.2-201ENST00000603282 481 ntBASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNAP47Q5SQN1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.69■□□□□ 0.42
SNAP47Q5SQN1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNAP47Q5SQN1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.69■□□□□ 0.42
SNAP47Q5SQN1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SNAP47Q5SQN1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SNAP47Q5SQN1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNAP47Q5SQN1 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNAP47Q5SQN1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNAP47Q5SQN1 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNAP47Q5SQN1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNAP47Q5SQN1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.69■□□□□ 0.42
SNAP47Q5SQN1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNAP47Q5SQN1 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNAP47Q5SQN1 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.69■□□□□ 0.42
SNAP47Q5SQN1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.69■□□□□ 0.42
SNAP47Q5SQN1 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SNAP47Q5SQN1 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SNAP47Q5SQN1 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNAP47Q5SQN1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNAP47Q5SQN1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.69■□□□□ 0.42
SNAP47Q5SQN1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNAP47Q5SQN1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
SNAP47Q5SQN1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNAP47Q5SQN1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SNAP47Q5SQN1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNAP47Q5SQN1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 TPSP2-201ENST00000561760 610 ntBASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 GPR32P1-201ENST00000601788 811 ntBASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 AL390719.2-201ENST00000606993 987 ntBASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 AC020916.1-201ENST00000587762 1774 ntBASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNAP47Q5SQN1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 AC106820.2-201ENST00000563775 3264 ntBASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 NOC2LP1-202ENST00000452600 2235 ntBASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms