Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.92■□□□□ 0.14
SFTPBP07988 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.92■□□□□ 0.14
SFTPBP07988 AC116562.2-201ENST00000507042 360 ntBASIC15.92■□□□□ 0.14
SFTPBP07988 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.92■□□□□ 0.14
SFTPBP07988 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.92■□□□□ 0.14
SFTPBP07988 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.92■□□□□ 0.14
SFTPBP07988 AC130371.2-201ENST00000619443 611 ntBASIC15.92■□□□□ 0.14
SFTPBP07988 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
SFTPBP07988 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.92■□□□□ 0.14
SFTPBP07988 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.92■□□□□ 0.14
SFTPBP07988 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SFTPBP07988 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SFTPBP07988 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SFTPBP07988 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.92■□□□□ 0.14
SFTPBP07988 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SFTPBP07988 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SFTPBP07988 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
SFTPBP07988 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SFTPBP07988 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SFTPBP07988 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.91■□□□□ 0.14
SFTPBP07988 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SFTPBP07988 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.91■□□□□ 0.14
SFTPBP07988 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SFTPBP07988 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.91■□□□□ 0.14
SFTPBP07988 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
SFTPBP07988 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
SFTPBP07988 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SFTPBP07988 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.91■□□□□ 0.14
SFTPBP07988 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SFTPBP07988 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SFTPBP07988 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.91■□□□□ 0.14
SFTPBP07988 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
SFTPBP07988 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SFTPBP07988 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SFTPBP07988 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SFTPBP07988 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SFTPBP07988 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SFTPBP07988 MIR1238-201ENST00000408483 83 ntBASIC15.91■□□□□ 0.14
SFTPBP07988 AL390955.1-201ENST00000428694 934 ntBASIC15.91■□□□□ 0.14
SFTPBP07988 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SFTPBP07988 AC011506.1-201ENST00000474329 610 ntBASIC15.91■□□□□ 0.14
SFTPBP07988 CKBP1-201ENST00000565489 1086 ntBASIC15.91■□□□□ 0.14
SFTPBP07988 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.91■□□□□ 0.14
SFTPBP07988 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.91■□□□□ 0.14
SFTPBP07988 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
SFTPBP07988 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SFTPBP07988 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SFTPBP07988 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SFTPBP07988 NFIC-211ENST00000641145 8399 ntBASIC15.91■□□□□ 0.14
SFTPBP07988 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SFTPBP07988 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.91■□□□□ 0.14
SFTPBP07988 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.91■□□□□ 0.14
SFTPBP07988 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SFTPBP07988 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SFTPBP07988 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SFTPBP07988 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SFTPBP07988 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SFTPBP07988 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SFTPBP07988 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SFTPBP07988 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.91■□□□□ 0.14
SFTPBP07988 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SFTPBP07988 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
SFTPBP07988 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SFTPBP07988 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SFTPBP07988 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SFTPBP07988 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SFTPBP07988 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SFTPBP07988 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.9■□□□□ 0.14
SFTPBP07988 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SFTPBP07988 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.9■□□□□ 0.14
SFTPBP07988 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SFTPBP07988 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SFTPBP07988 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SFTPBP07988 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SFTPBP07988 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.9■□□□□ 0.14
SFTPBP07988 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.9■□□□□ 0.14
SFTPBP07988 AL357033.4-201ENST00000617703 1807 ntBASIC15.9■□□□□ 0.14
SFTPBP07988 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SFTPBP07988 MMP23A-201ENST00000234610 1017 ntBASIC15.9■□□□□ 0.14
SFTPBP07988 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SFTPBP07988 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.9■□□□□ 0.14
SFTPBP07988 MESTP1-201ENST00000404287 994 ntBASIC15.9■□□□□ 0.14
SFTPBP07988 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SFTPBP07988 FAM207BP-201ENST00000447172 505 ntBASIC15.9■□□□□ 0.14
SFTPBP07988 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
SFTPBP07988 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.9■□□□□ 0.14
SFTPBP07988 LINC01023-201ENST00000606054 436 ntBASIC15.9■□□□□ 0.14
SFTPBP07988 MIR6786-201ENST00000616843 113 ntBASIC15.9■□□□□ 0.14
SFTPBP07988 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SFTPBP07988 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.9■□□□□ 0.14
SFTPBP07988 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SFTPBP07988 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SFTPBP07988 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SFTPBP07988 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.9■□□□□ 0.14
SFTPBP07988 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SFTPBP07988 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SFTPBP07988 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.9■□□□□ 0.14
SFTPBP07988 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SFTPBP07988 FSCN1P1-201ENST00000568912 1481 ntBASIC15.9■□□□□ 0.14
SFTPBP07988 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms