Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.54
RSPO4Q2I0M5 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
RSPO4Q2I0M5 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
RSPO4Q2I0M5 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
RSPO4Q2I0M5 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.69■■□□□ 1.54
RSPO4Q2I0M5 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC24.68■■□□□ 1.54
RSPO4Q2I0M5 AC239859.2-201ENST00000444165 318 ntBASIC24.68■■□□□ 1.54
RSPO4Q2I0M5 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RSPO4Q2I0M5 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
RSPO4Q2I0M5 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.67■■□□□ 1.54
RSPO4Q2I0M5 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.67■■□□□ 1.54
RSPO4Q2I0M5 AC103724.3-201ENST00000564481 992 ntBASIC24.67■■□□□ 1.54
RSPO4Q2I0M5 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RSPO4Q2I0M5 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RSPO4Q2I0M5 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RSPO4Q2I0M5 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RSPO4Q2I0M5 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.66■■□□□ 1.54
RSPO4Q2I0M5 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.66■■□□□ 1.54
RSPO4Q2I0M5 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RSPO4Q2I0M5 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RSPO4Q2I0M5 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
RSPO4Q2I0M5 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.65■■□□□ 1.54
RSPO4Q2I0M5 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC24.65■■□□□ 1.54
RSPO4Q2I0M5 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.65■■□□□ 1.54
RSPO4Q2I0M5 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RSPO4Q2I0M5 RNF146-205ENST00000477776 762 ntTSL 3 BASIC24.64■■□□□ 1.54
RSPO4Q2I0M5 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RSPO4Q2I0M5 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RSPO4Q2I0M5 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RSPO4Q2I0M5 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.63■■□□□ 1.53
RSPO4Q2I0M5 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
RSPO4Q2I0M5 AC120057.4-201ENST00000624722 1615 ntBASIC24.63■■□□□ 1.53
RSPO4Q2I0M5 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RSPO4Q2I0M5 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RSPO4Q2I0M5 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RSPO4Q2I0M5 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RSPO4Q2I0M5 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.62■■□□□ 1.53
RSPO4Q2I0M5 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RSPO4Q2I0M5 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
RSPO4Q2I0M5 AL161658.1-201ENST00000623641 1967 ntBASIC24.61■■□□□ 1.53
RSPO4Q2I0M5 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC24.61■■□□□ 1.53
RSPO4Q2I0M5 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.61■■□□□ 1.53
RSPO4Q2I0M5 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RSPO4Q2I0M5 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC24.6■■□□□ 1.53
RSPO4Q2I0M5 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.6■■□□□ 1.53
RSPO4Q2I0M5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
RSPO4Q2I0M5 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.59■■□□□ 1.53
RSPO4Q2I0M5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC24.59■■□□□ 1.53
RSPO4Q2I0M5 AC093536.1-201ENST00000569153 554 ntBASIC24.59■■□□□ 1.53
RSPO4Q2I0M5 RAP2CP1-202ENST00000605179 643 ntBASIC24.59■■□□□ 1.53
RSPO4Q2I0M5 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC24.59■■□□□ 1.53
RSPO4Q2I0M5 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.58■■□□□ 1.53
RSPO4Q2I0M5 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RSPO4Q2I0M5 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RSPO4Q2I0M5 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
RSPO4Q2I0M5 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.57■■□□□ 1.52
RSPO4Q2I0M5 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RSPO4Q2I0M5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.56■■□□□ 1.52
RSPO4Q2I0M5 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
RSPO4Q2I0M5 AC018755.3-202ENST00000596210 929 ntBASIC24.56■■□□□ 1.52
RSPO4Q2I0M5 RALB-208ENST00000631312 311 ntTSL 5 BASIC24.56■■□□□ 1.52
RSPO4Q2I0M5 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
RSPO4Q2I0M5 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RSPO4Q2I0M5 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RSPO4Q2I0M5 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RSPO4Q2I0M5 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.55■■□□□ 1.52
RSPO4Q2I0M5 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RSPO4Q2I0M5 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC24.55■■□□□ 1.52
RSPO4Q2I0M5 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.55■■□□□ 1.52
RSPO4Q2I0M5 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
RSPO4Q2I0M5 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
RSPO4Q2I0M5 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.54■■□□□ 1.52
RSPO4Q2I0M5 AL139246.5-201ENST00000606645 996 ntBASIC24.54■■□□□ 1.52
RSPO4Q2I0M5 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RSPO4Q2I0M5 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.54■■□□□ 1.52
RSPO4Q2I0M5 AC092666.2-201ENST00000613287 246 ntBASIC24.53■■□□□ 1.52
RSPO4Q2I0M5 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RSPO4Q2I0M5 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RSPO4Q2I0M5 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
RSPO4Q2I0M5 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RSPO4Q2I0M5 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.51■■□□□ 1.51
RSPO4Q2I0M5 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC24.51■■□□□ 1.51
RSPO4Q2I0M5 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.51■■□□□ 1.51
RSPO4Q2I0M5 Z92544.1-202ENST00000571933 1220 ntBASIC24.51■■□□□ 1.51
RSPO4Q2I0M5 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.51■■□□□ 1.51
RSPO4Q2I0M5 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RSPO4Q2I0M5 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.5■■□□□ 1.51
RSPO4Q2I0M5 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RSPO4Q2I0M5 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
RSPO4Q2I0M5 NALT1-201ENST00000429224 738 ntTSL 5 BASIC24.49■■□□□ 1.51
RSPO4Q2I0M5 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RSPO4Q2I0M5 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
RSPO4Q2I0M5 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.49■■□□□ 1.51
RSPO4Q2I0M5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RSPO4Q2I0M5 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.48■■□□□ 1.51
RSPO4Q2I0M5 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.48■■□□□ 1.51
RSPO4Q2I0M5 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RSPO4Q2I0M5 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RSPO4Q2I0M5 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RSPO4Q2I0M5 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.47■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms