Protein–RNA interactions for Protein: P38353

SSH1, Sec sixty-one protein homolog, yeastyeast

Known RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH1P38353 YDR476CYDR476C 675 nt6.35□□□□□ -1.39
SSH1P38353 YGR068W-AYGR068W-A 96 nt6.35□□□□□ -1.39
SSH1P38353 LOT6YLR011W 576 nt6.35□□□□□ -1.39
SSH1P38353 SKP1YDR328C 585 nt6.34□□□□□ -1.39
SSH1P38353 HRA1HRA1 564 nt6.34□□□□□ -1.39
SSH1P38353 NUP57YGR119C 1626 nt6.34□□□□□ -1.39
SSH1P38353 PAU21YOR394W 495 nt6.33□□□□□ -1.4
SSH1P38353 PAU22YPL282C 495 nt6.33□□□□□ -1.4
SSH1P38353 RDR1YOR380W 1641 nt6.32□□□□□ -1.4
SSH1P38353 tL(UAA)B1tL(UAA)B1 84 nt6.32□□□□□ -1.4
SSH1P38353 tL(UAA)B2tL(UAA)B2 84 nt6.32□□□□□ -1.4
SSH1P38353 tL(UAA)DtL(UAA)D 84 nt6.32□□□□□ -1.4
SSH1P38353 SUP51tL(UAA)J 84 nt6.32□□□□□ -1.4
SSH1P38353 tL(UAA)KtL(UAA)K 84 nt6.32□□□□□ -1.4
SSH1P38353 tL(UAA)LtL(UAA)L 84 nt6.32□□□□□ -1.4
SSH1P38353 tL(UAA)NtL(UAA)N 84 nt6.32□□□□□ -1.4
SSH1P38353 PIL1YGR086C 1020 nt6.32□□□□□ -1.4
SSH1P38353 HGH1YGR187C 1185 nt6.32□□□□□ -1.4
SSH1P38353 YJL213WYJL213W 996 nt6.32□□□□□ -1.4
SSH1P38353 YNR001W-AYNR001W-A 219 nt6.32□□□□□ -1.4
SSH1P38353 MSI1YBR195C 1269 nt6.32□□□□□ -1.4
SSH1P38353 MHP1YJL042W 4197 nt6.32□□□□□ -1.4
SSH1P38353 EMP65YER140W 1671 nt6.32□□□□□ -1.4
SSH1P38353 TPK1YJL164C 1194 nt6.31□□□□□ -1.4
SSH1P38353 CCW12YLR110C 402 nt6.31□□□□□ -1.4
SSH1P38353 TOS1YBR162C 1368 nt6.31□□□□□ -1.4
SSH1P38353 SKY1YMR216C 2229 nt6.3□□□□□ -1.4
SSH1P38353 YCR041WYCR041W 333 nt6.3□□□□□ -1.4
SSH1P38353 SUF3tG(CCC)D 72 nt6.3□□□□□ -1.4
SSH1P38353 NMA2YGR010W 1188 nt6.3□□□□□ -1.4
SSH1P38353 FUS3YBL016W 1062 nt6.3□□□□□ -1.4
SSH1P38353 YMR074CYMR074C 438 nt6.3□□□□□ -1.4
SSH1P38353 CDC7YDL017W 1524 nt6.3□□□□□ -1.4
SSH1P38353 EXG2YDR261C 1689 nt6.3□□□□□ -1.4
SSH1P38353 GYP8YFL027C 1494 nt6.29□□□□□ -1.4
SSH1P38353 YGL081WYGL081W 963 nt6.29□□□□□ -1.4
SSH1P38353 HMS2YJR147W 1077 nt6.29□□□□□ -1.4
SSH1P38353 MEU1YLR017W 1014 nt6.29□□□□□ -1.4
SSH1P38353 CDC3YLR314C 1563 nt6.29□□□□□ -1.4
SSH1P38353 RFS1YBR052C 633 nt6.29□□□□□ -1.4
SSH1P38353 FET4YMR319C 1659 nt6.29□□□□□ -1.4
SSH1P38353 NCA3YJL116C 1014 nt6.28□□□□□ -1.4
SSH1P38353 YJR154WYJR154W 1041 nt6.28□□□□□ -1.4
SSH1P38353 SLX5YDL013W 1860 nt6.28□□□□□ -1.4
SSH1P38353 SNF4YGL115W 969 nt6.27□□□□□ -1.41
SSH1P38353 SUN4YNL066W 1263 nt6.27□□□□□ -1.41
SSH1P38353 PGI1YBR196C 1665 nt6.26□□□□□ -1.41
SSH1P38353 YLR112WYLR112W 420 nt6.26□□□□□ -1.41
SSH1P38353 YBR284WYBR284W 2394 nt6.26□□□□□ -1.41
SSH1P38353 NMT1YLR195C 1368 nt6.26□□□□□ -1.41
SSH1P38353 PET117YER058W 324 nt6.25□□□□□ -1.41
SSH1P38353 MGM101YJR144W 810 nt6.25□□□□□ -1.41
SSH1P38353 YOR343CYOR343C 327 nt6.25□□□□□ -1.41
SSH1P38353 PHO85YPL031C 918 nt6.25□□□□□ -1.41
SSH1P38353 SDH8YBR269C 417 nt6.25□□□□□ -1.41
SSH1P38353 CIT2YCR005C 1383 nt6.25□□□□□ -1.41
SSH1P38353 NUP84YDL116W 2181 nt6.24□□□□□ -1.41
SSH1P38353 AIM2YAL049C 741 nt6.24□□□□□ -1.41
SSH1P38353 YOR012WYOR012W 414 nt6.24□□□□□ -1.41
SSH1P38353 RPL43AYPR043W 279 nt6.24□□□□□ -1.41
SSH1P38353 PET494YNR045W 1470 nt6.23□□□□□ -1.41
SSH1P38353 NOG2YNR053C 1461 nt6.23□□□□□ -1.41
SSH1P38353 PAM17YKR065C 594 nt6.23□□□□□ -1.41
SSH1P38353 ERG27YLR100W 1044 nt6.23□□□□□ -1.41
SSH1P38353 CLN1YMR199W 1641 nt6.22□□□□□ -1.41
SSH1P38353 BRN1YBL097W 2265 nt6.22□□□□□ -1.41
SSH1P38353 TKL2YBR117C 2046 nt6.22□□□□□ -1.41
SSH1P38353 RSP5YER125W 2430 nt6.21□□□□□ -1.41
SSH1P38353 DOC1YGL240W 753 nt6.21□□□□□ -1.42
SSH1P38353 PAC10YGR078C 600 nt6.21□□□□□ -1.42
SSH1P38353 YBL070CYBL070C 321 nt6.21□□□□□ -1.42
SSH1P38353 YPR127WYPR127W 1038 nt6.21□□□□□ -1.42
SSH1P38353 YML122CYML122C 381 nt6.2□□□□□ -1.42
SSH1P38353 DPM1YPR183W 804 nt6.2□□□□□ -1.42
SSH1P38353 TDP1YBR223C 1635 nt6.19□□□□□ -1.42
SSH1P38353 YPQ2YDR352W 954 nt6.19□□□□□ -1.42
SSH1P38353 RTC4YNL254C 1206 nt6.19□□□□□ -1.42
SSH1P38353 SRF1YDL133W 1314 nt6.19□□□□□ -1.42
SSH1P38353 HXT15YDL245C 1704 nt6.19□□□□□ -1.42
SSH1P38353 HXT16YJR158W 1704 nt6.19□□□□□ -1.42
SSH1P38353 HXT2YMR011W 1626 nt6.18□□□□□ -1.42
SSH1P38353 HXK2YGL253W 1461 nt6.18□□□□□ -1.42
SSH1P38353 DMC1YER179W 1005 nt6.18□□□□□ -1.42
SSH1P38353 YLR358CYLR358C 564 nt6.18□□□□□ -1.42
SSH1P38353 HHY1YEL059W 309 nt6.17□□□□□ -1.42
SSH1P38353 THR1YHR025W 1074 nt6.17□□□□□ -1.42
SSH1P38353 SNT309YPR101W 528 nt6.17□□□□□ -1.42
SSH1P38353 CBK1YNL161W 2271 nt6.16□□□□□ -1.42
SSH1P38353 NFS1YCL017C 1494 nt6.16□□□□□ -1.42
SSH1P38353 MKK1YOR231W 1527 nt6.16□□□□□ -1.42
SSH1P38353 MIX17YMR002W 471 nt6.16□□□□□ -1.42
SSH1P38353 MCH2YKL221W 1422 nt6.16□□□□□ -1.42
SSH1P38353 AMN1YBR158W 1650 nt6.15□□□□□ -1.42
SSH1P38353 MTR3YGR158C 753 nt6.15□□□□□ -1.42
SSH1P38353 YAL016C-AYAL016C-A 315 nt6.15□□□□□ -1.42
SSH1P38353 BUD20YLR074C 501 nt6.15□□□□□ -1.42
SSH1P38353 POP1YNL221C 2628 nt6.15□□□□□ -1.43
SSH1P38353 DLD1YDL174C 1764 nt6.15□□□□□ -1.43
SSH1P38353 RQC1YDR333C 2172 nt6.14□□□□□ -1.43
SSH1P38353 ATP23YNR020C 813 nt6.14□□□□□ -1.43
Retrieved 100 of 7,029 protein–RNA pairs in 55.7 ms