Protein–RNA interactions for Protein: Q53H54

TRMT12, tRNA wybutosine-synthesizing protein 2 homolog, humanhuman

Known RBP Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT12Q53H54 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRMT12Q53H54 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRMT12Q53H54 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.28■□□□□ 0.36
TRMT12Q53H54 ECEL1P3-201ENST00000427961 737 ntBASIC17.28■□□□□ 0.36
TRMT12Q53H54 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.28■□□□□ 0.36
TRMT12Q53H54 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.28■□□□□ 0.36
TRMT12Q53H54 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRMT12Q53H54 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.28■□□□□ 0.36
TRMT12Q53H54 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.28■□□□□ 0.36
TRMT12Q53H54 AC005363.2-201ENST00000618631 242 ntBASIC17.28■□□□□ 0.36
TRMT12Q53H54 AC141257.4-201ENST00000634557 245 ntBASIC17.28■□□□□ 0.36
TRMT12Q53H54 AC136944.6-201ENST00000634818 245 ntBASIC17.28■□□□□ 0.36
TRMT12Q53H54 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TRMT12Q53H54 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
TRMT12Q53H54 KRT8P7-201ENST00000533003 1432 ntBASIC17.28■□□□□ 0.36
TRMT12Q53H54 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRMT12Q53H54 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRMT12Q53H54 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.28■□□□□ 0.36
TRMT12Q53H54 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TRMT12Q53H54 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.28■□□□□ 0.36
TRMT12Q53H54 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.28■□□□□ 0.36
TRMT12Q53H54 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRMT12Q53H54 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.27■□□□□ 0.36
TRMT12Q53H54 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRMT12Q53H54 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRMT12Q53H54 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRMT12Q53H54 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRMT12Q53H54 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRMT12Q53H54 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.27■□□□□ 0.36
TRMT12Q53H54 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRMT12Q53H54 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRMT12Q53H54 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TRMT12Q53H54 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRMT12Q53H54 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRMT12Q53H54 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRMT12Q53H54 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.36
TRMT12Q53H54 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.27■□□□□ 0.36
TRMT12Q53H54 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRMT12Q53H54 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRMT12Q53H54 LINC01023-201ENST00000606054 436 ntBASIC17.27■□□□□ 0.36
TRMT12Q53H54 AC024243.1-201ENST00000609234 778 ntBASIC17.27■□□□□ 0.36
TRMT12Q53H54 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRMT12Q53H54 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRMT12Q53H54 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.27■□□□□ 0.35
TRMT12Q53H54 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRMT12Q53H54 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TRMT12Q53H54 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.27■□□□□ 0.35
TRMT12Q53H54 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
TRMT12Q53H54 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.27■□□□□ 0.35
TRMT12Q53H54 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRMT12Q53H54 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRMT12Q53H54 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.26■□□□□ 0.35
TRMT12Q53H54 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT12Q53H54 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRMT12Q53H54 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT12Q53H54 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.26■□□□□ 0.35
TRMT12Q53H54 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.26■□□□□ 0.35
TRMT12Q53H54 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT12Q53H54 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.26■□□□□ 0.35
TRMT12Q53H54 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.26■□□□□ 0.35
TRMT12Q53H54 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.26■□□□□ 0.35
TRMT12Q53H54 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT12Q53H54 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.26■□□□□ 0.35
TRMT12Q53H54 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT12Q53H54 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT12Q53H54 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT12Q53H54 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
TRMT12Q53H54 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT12Q53H54 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT12Q53H54 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.26■□□□□ 0.35
TRMT12Q53H54 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.26■□□□□ 0.35
TRMT12Q53H54 AC113347.1-201ENST00000413321 391 ntBASIC17.26■□□□□ 0.35
TRMT12Q53H54 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.26■□□□□ 0.35
TRMT12Q53H54 LIN28AP1-201ENST00000429574 405 ntBASIC17.26■□□□□ 0.35
TRMT12Q53H54 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.26■□□□□ 0.35
TRMT12Q53H54 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.26■□□□□ 0.35
TRMT12Q53H54 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.26■□□□□ 0.35
TRMT12Q53H54 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.26■□□□□ 0.35
TRMT12Q53H54 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.26■□□□□ 0.35
TRMT12Q53H54 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT12Q53H54 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.26■□□□□ 0.35
TRMT12Q53H54 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT12Q53H54 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT12Q53H54 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.26■□□□□ 0.35
TRMT12Q53H54 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRMT12Q53H54 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.26■□□□□ 0.35
TRMT12Q53H54 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.26■□□□□ 0.35
TRMT12Q53H54 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT12Q53H54 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRMT12Q53H54 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.26■□□□□ 0.35
TRMT12Q53H54 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.26■□□□□ 0.35
TRMT12Q53H54 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRMT12Q53H54 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRMT12Q53H54 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.25■□□□□ 0.35
TRMT12Q53H54 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.25■□□□□ 0.35
TRMT12Q53H54 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TRMT12Q53H54 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.25■□□□□ 0.35
TRMT12Q53H54 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.25■□□□□ 0.35
TRMT12Q53H54 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRMT12Q53H54 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms